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Search of human proteins with 227498137
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|227498137 UFM1-specific peptidase 2 [Homo sapiens]
(469 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|227498137 UFM1-specific peptidase 2 [Homo sapiens] 968 0.0
gi|146231966 inactive Ufm1-specific protease 1 [Homo sapiens] 78 2e-14
gi|21450836 zinc finger with UFM1-specific peptidase domain [Hom... 40 0.005
gi|225543474 myotubularin related protein 7 [Homo sapiens] 31 2.8
gi|197313732 pleckstrin homology-like domain, family B, member 2... 31 2.8
gi|197313730 pleckstrin homology-like domain, family B, member 2... 31 2.8
gi|197313728 pleckstrin homology-like domain, family B, member 2... 31 2.8
gi|21955172 pleckstrin homology-like domain, family B, member 2 ... 31 2.8
gi|4505167 N-acetylglucosaminyltransferase V [Homo sapiens] 30 4.7
gi|169218211 PREDICTED: similar to plectin 1, partial [Homo sapi... 30 6.1
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 30 6.1
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 30 6.1
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 30 6.1
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 30 6.1
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 30 6.1
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 30 6.1
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 30 6.1
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 30 6.1
>gi|227498137 UFM1-specific peptidase 2 [Homo sapiens]
Length = 469
Score = 968 bits (2502), Expect = 0.0
Identities = 469/469 (100%), Positives = 469/469 (100%)
Query: 1 MVISESMDILFRIRGGLDLAFQLATPNEIFLKKALKHVLSDLSTKLSSNALVFRICHSSV 60
MVISESMDILFRIRGGLDLAFQLATPNEIFLKKALKHVLSDLSTKLSSNALVFRICHSSV
Sbjct: 1 MVISESMDILFRIRGGLDLAFQLATPNEIFLKKALKHVLSDLSTKLSSNALVFRICHSSV 60
Query: 61 YIWPSSDINTIPGELTDASACKNILRFIQFEPEEDIKRKFMRKKDKKLSDMHQIVNIDLM 120
YIWPSSDINTIPGELTDASACKNILRFIQFEPEEDIKRKFMRKKDKKLSDMHQIVNIDLM
Sbjct: 61 YIWPSSDINTIPGELTDASACKNILRFIQFEPEEDIKRKFMRKKDKKLSDMHQIVNIDLM 120
Query: 121 LEMSTSLAAVTPIIERESGGHHYVNMTLPVDAVISVAPEETWGKVRKLLVDAIHNQLTDM 180
LEMSTSLAAVTPIIERESGGHHYVNMTLPVDAVISVAPEETWGKVRKLLVDAIHNQLTDM
Sbjct: 121 LEMSTSLAAVTPIIERESGGHHYVNMTLPVDAVISVAPEETWGKVRKLLVDAIHNQLTDM 180
Query: 181 EKCILKYMKGTSIVVPEPLHFLLPGKKNLVTISYPSGIPDGQLQAYRKELHDLFNLPHDR 240
EKCILKYMKGTSIVVPEPLHFLLPGKKNLVTISYPSGIPDGQLQAYRKELHDLFNLPHDR
Sbjct: 181 EKCILKYMKGTSIVVPEPLHFLLPGKKNLVTISYPSGIPDGQLQAYRKELHDLFNLPHDR 240
Query: 241 PYFKRSNAYHFPDEPYKDGYIRNPHTYLNPPNMETGMIYVVQGIYGYHHYMQDRIDDNGW 300
PYFKRSNAYHFPDEPYKDGYIRNPHTYLNPPNMETGMIYVVQGIYGYHHYMQDRIDDNGW
Sbjct: 241 PYFKRSNAYHFPDEPYKDGYIRNPHTYLNPPNMETGMIYVVQGIYGYHHYMQDRIDDNGW 300
Query: 301 GCAYRSLQTICSWFKHQGYTERSIPTHREIQQALVDAGDKPATFVGSRQWIGSIEVQLVL 360
GCAYRSLQTICSWFKHQGYTERSIPTHREIQQALVDAGDKPATFVGSRQWIGSIEVQLVL
Sbjct: 301 GCAYRSLQTICSWFKHQGYTERSIPTHREIQQALVDAGDKPATFVGSRQWIGSIEVQLVL 360
Query: 361 NQLIGITSKILFVSQGSEIASQGRELANHFQSEGTPVMIGGGVLAHTILGVAWNEITGQI 420
NQLIGITSKILFVSQGSEIASQGRELANHFQSEGTPVMIGGGVLAHTILGVAWNEITGQI
Sbjct: 361 NQLIGITSKILFVSQGSEIASQGRELANHFQSEGTPVMIGGGVLAHTILGVAWNEITGQI 420
Query: 421 KFLILDPHYTGAEDLQVILEKGWCGWKGPDFWNKDAYYNLCLPQRPNMI 469
KFLILDPHYTGAEDLQVILEKGWCGWKGPDFWNKDAYYNLCLPQRPNMI
Sbjct: 421 KFLILDPHYTGAEDLQVILEKGWCGWKGPDFWNKDAYYNLCLPQRPNMI 469
>gi|146231966 inactive Ufm1-specific protease 1 [Homo sapiens]
Length = 142
Score = 77.8 bits (190), Expect = 2e-14
Identities = 48/129 (37%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Query: 338 GDKPATFVGSRQWIGSIEVQLVLNQLIGITSKILFVSQGSEIASQGRELANHFQSEGTPV 397
GDKP F GSR WIG +E L L G ++ V +G + + L +HF G PV
Sbjct: 2 GDKPPGFRGSRDWIGCVEASLCLAHFGGPQGRLCHVPRGVGLHGELERLYSHFAGGGGPV 61
Query: 398 MIGGGVLAHT--ILGVAWNEITGQIKFLILDPHYTGAEDLQVILE-KGWCGWKGPD-FWN 453
M+GG A + +LGV T + L+LDPHY G L+ GW GW+ ++
Sbjct: 62 MVGGDADARSKALLGVCVGSGT-EAYVLVLDPHYWGTPKSPSELQAAGWVGWQEVSAAFD 120
Query: 454 KDAYYNLCL 462
+++YNLCL
Sbjct: 121 PNSFYNLCL 129
>gi|21450836 zinc finger with UFM1-specific peptidase domain [Homo
sapiens]
Length = 578
Score = 40.0 bits (92), Expect = 0.005
Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 35/212 (16%)
Query: 246 SNAYHFPDEPYK-DGYIRNPHTYLNPPNMETGMIYVVQGIYGYHHYMQDRIDDNGWGCAY 304
S A F D K G I H Y + +++ + +H + D GWGC Y
Sbjct: 307 SLALGFDDGKTKTSGIIEALHRYYQNAATDVRRVWLSSVVDHFH----SSLGDKGWGCGY 362
Query: 305 RSLQ-TICSWFKHQGYTE----RSIPTHREIQQALVDA---GDKPA-------TFVGSRQ 349
R+ Q + S ++ Y + IP +IQ + DA G P G++
Sbjct: 363 RNFQMLLSSLLQNDAYDDCLKGMLIPCIPKIQSMIEDAWKEGFDPQGASQLNNRLQGTKA 422
Query: 350 WIGSIEVQLVLNQLIGITSKILFVSQGSEIASQGR---ELANHFQSEG-----------T 395
WIG+ EV ++L L + F + + R + N++ SEG
Sbjct: 423 WIGACEVYILLTSLRVKCHIVDFHKSTGPLGTHPRLFEWILNYYSSEGEGSPKVVCTSKP 482
Query: 396 PVMIGGGVLAHTILGVAWNEITGQIKFLILDP 427
P+ + + T++G+ + + LILDP
Sbjct: 483 PIYLQHQGHSRTVIGIE-EKKNRTLCLLILDP 513
>gi|225543474 myotubularin related protein 7 [Homo sapiens]
Length = 660
Score = 30.8 bits (68), Expect = 2.8
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 400 GGGVLAHTILGVAWNEITGQIKFLILDPHYTGAEDLQVILEKGW 443
G VL H G + L+LDPHY + V++EK W
Sbjct: 331 GASVLVHCSDGWDRTAQVCSVASLLLDPHYRTLKGFMVLIEKDW 374
>gi|197313732 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 30.8 bits (68), Expect = 2.8
Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 22/134 (16%)
Query: 80 ACKNILRFIQFEPEEDI---KRKFMRKKDKKLSDMHQIVNIDLMLEMSTSLAAVTPIIER 136
A +N L + P + KR + +KD H +++ D L S+ + P
Sbjct: 262 ATENQLTPLSLPPRNSLGNSKRTKLGEKDLP----HSVIDNDNYLNFSSLSSGALPYKTS 317
Query: 137 ESGGHHYVNMTLPVDAVISVAPEETWGKVRKLLVDAIHNQLTDMEKCILKYMKGTSIVVP 196
S G+ YV+ TL V A VA RK+L L C S V
Sbjct: 318 ASEGNPYVSSTLSVPASPRVA--------RKML-------LASTSSCASDDFDQASYVGT 362
Query: 197 EPLHFLLPGKKNLV 210
P H LL G+ + V
Sbjct: 363 NPSHSLLAGESDRV 376
>gi|197313730 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 30.8 bits (68), Expect = 2.8
Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 22/134 (16%)
Query: 80 ACKNILRFIQFEPEEDI---KRKFMRKKDKKLSDMHQIVNIDLMLEMSTSLAAVTPIIER 136
A +N L + P + KR + +KD H +++ D L S+ + P
Sbjct: 262 ATENQLTPLSLPPRNSLGNSKRTKLGEKDLP----HSVIDNDNYLNFSSLSSGALPYKTS 317
Query: 137 ESGGHHYVNMTLPVDAVISVAPEETWGKVRKLLVDAIHNQLTDMEKCILKYMKGTSIVVP 196
S G+ YV+ TL V A VA RK+L L C S V
Sbjct: 318 ASEGNPYVSSTLSVPASPRVA--------RKML-------LASTSSCASDDFDQASYVGT 362
Query: 197 EPLHFLLPGKKNLV 210
P H LL G+ + V
Sbjct: 363 NPSHSLLAGESDRV 376
>gi|197313728 pleckstrin homology-like domain, family B, member 2
isoform b [Homo sapiens]
Length = 1237
Score = 30.8 bits (68), Expect = 2.8
Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 22/134 (16%)
Query: 80 ACKNILRFIQFEPEEDI---KRKFMRKKDKKLSDMHQIVNIDLMLEMSTSLAAVTPIIER 136
A +N L + P + KR + +KD H +++ D L S+ + P
Sbjct: 289 ATENQLTPLSLPPRNSLGNSKRTKLGEKDLP----HSVIDNDNYLNFSSLSSGALPYKTS 344
Query: 137 ESGGHHYVNMTLPVDAVISVAPEETWGKVRKLLVDAIHNQLTDMEKCILKYMKGTSIVVP 196
S G+ YV+ TL V A VA RK+L L C S V
Sbjct: 345 ASEGNPYVSSTLSVPASPRVA--------RKML-------LASTSSCASDDFDQASYVGT 389
Query: 197 EPLHFLLPGKKNLV 210
P H LL G+ + V
Sbjct: 390 NPSHSLLAGESDRV 403
>gi|21955172 pleckstrin homology-like domain, family B, member 2
isoform c [Homo sapiens]
Length = 1210
Score = 30.8 bits (68), Expect = 2.8
Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 22/134 (16%)
Query: 80 ACKNILRFIQFEPEEDI---KRKFMRKKDKKLSDMHQIVNIDLMLEMSTSLAAVTPIIER 136
A +N L + P + KR + +KD H +++ D L S+ + P
Sbjct: 262 ATENQLTPLSLPPRNSLGNSKRTKLGEKDLP----HSVIDNDNYLNFSSLSSGALPYKTS 317
Query: 137 ESGGHHYVNMTLPVDAVISVAPEETWGKVRKLLVDAIHNQLTDMEKCILKYMKGTSIVVP 196
S G+ YV+ TL V A VA RK+L L C S V
Sbjct: 318 ASEGNPYVSSTLSVPASPRVA--------RKML-------LASTSSCASDDFDQASYVGT 362
Query: 197 EPLHFLLPGKKNLV 210
P H LL G+ + V
Sbjct: 363 NPSHSLLAGESDRV 376
>gi|4505167 N-acetylglucosaminyltransferase V [Homo sapiens]
Length = 741
Score = 30.0 bits (66), Expect = 4.7
Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 24/145 (16%)
Query: 142 HYVNMTLPVDAVISVAPEETWGKVRKLLVDAIHNQLT-------DMEKCILKYMKGTSIV 194
H++N + + +++ K +K+ +D IH + K I Y+K I+
Sbjct: 438 HHINEIKRQNQSLVYGKVDSFWKNKKIYLDIIHTYMEVHATVYGSSTKNIPSYVKNHGIL 497
Query: 195 VPEPLHFLLPGKKNLVTISYPSGIPDGQLQAYRKE---LHDLFNLPHD---------RPY 242
L FLL K V + +P P L+A L+ FN P +P
Sbjct: 498 SGRDLQFLLRETKLFVGLGFPYEGP-APLEAIANGCAFLNPKFNPPKSSKNTDFFIGKPT 556
Query: 243 FKRSNAYHFPDEPYKDGYIRNPHTY 267
+ + H PY + +I PH +
Sbjct: 557 LRELTSQH----PYAEVFIGRPHVW 577
>gi|169218211 PREDICTED: similar to plectin 1, partial [Homo
sapiens]
Length = 1369
Score = 29.6 bits (65), Expect = 6.1
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 271 PNMETGMIYVVQGIYGYHHYMQDRIDDNGWGCAYRSLQTICSWFKHQGYTERSIPTHREI 330
P +E + +Q + + Q R+D WG S++ H+G + +I
Sbjct: 648 PELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLG--SHRGLHQSIEEFQAKI 705
Query: 331 QQALVDAGD-KPATFVGSRQWIGSIEVQ 357
++A D G PAT R +G +++Q
Sbjct: 706 ERARSDEGQLSPATRGAYRDCLGRLDLQ 733
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 29.6 bits (65), Expect = 6.1
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 271 PNMETGMIYVVQGIYGYHHYMQDRIDDNGWGCAYRSLQTICSWFKHQGYTERSIPTHREI 330
P +E + +Q + + Q R+D WG S++ H+G + +I
Sbjct: 515 PELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLG--SHRGLHQSIEEFRAKI 572
Query: 331 QQALVDAGD-KPATFVGSRQWIGSIEVQ 357
++A D G PAT R +G +++Q
Sbjct: 573 ERARSDEGQLSPATRGAYRDCLGRLDLQ 600
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 29.6 bits (65), Expect = 6.1
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 271 PNMETGMIYVVQGIYGYHHYMQDRIDDNGWGCAYRSLQTICSWFKHQGYTERSIPTHREI 330
P +E + +Q + + Q R+D WG S++ H+G + +I
Sbjct: 519 PELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLG--SHRGLHQSIEEFRAKI 576
Query: 331 QQALVDAGD-KPATFVGSRQWIGSIEVQ 357
++A D G PAT R +G +++Q
Sbjct: 577 ERARSDEGQLSPATRGAYRDCLGRLDLQ 604
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 29.6 bits (65), Expect = 6.1
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 271 PNMETGMIYVVQGIYGYHHYMQDRIDDNGWGCAYRSLQTICSWFKHQGYTERSIPTHREI 330
P +E + +Q + + Q R+D WG S++ H+G + +I
Sbjct: 515 PELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLG--SHRGLHQSIEEFRAKI 572
Query: 331 QQALVDAGD-KPATFVGSRQWIGSIEVQ 357
++A D G PAT R +G +++Q
Sbjct: 573 ERARSDEGQLSPATRGAYRDCLGRLDLQ 600
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 29.6 bits (65), Expect = 6.1
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 271 PNMETGMIYVVQGIYGYHHYMQDRIDDNGWGCAYRSLQTICSWFKHQGYTERSIPTHREI 330
P +E + +Q + + Q R+D WG S++ H+G + +I
Sbjct: 483 PELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLG--SHRGLHQSIEEFRAKI 540
Query: 331 QQALVDAGD-KPATFVGSRQWIGSIEVQ 357
++A D G PAT R +G +++Q
Sbjct: 541 ERARSDEGQLSPATRGAYRDCLGRLDLQ 568
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 29.6 bits (65), Expect = 6.1
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 271 PNMETGMIYVVQGIYGYHHYMQDRIDDNGWGCAYRSLQTICSWFKHQGYTERSIPTHREI 330
P +E + +Q + + Q R+D WG S++ H+G + +I
Sbjct: 652 PELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLG--SHRGLHQSIEEFRAKI 709
Query: 331 QQALVDAGD-KPATFVGSRQWIGSIEVQ 357
++A D G PAT R +G +++Q
Sbjct: 710 ERARSDEGQLSPATRGAYRDCLGRLDLQ 737
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 29.6 bits (65), Expect = 6.1
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 271 PNMETGMIYVVQGIYGYHHYMQDRIDDNGWGCAYRSLQTICSWFKHQGYTERSIPTHREI 330
P +E + +Q + + Q R+D WG S++ H+G + +I
Sbjct: 493 PELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLG--SHRGLHQSIEEFRAKI 550
Query: 331 QQALVDAGD-KPATFVGSRQWIGSIEVQ 357
++A D G PAT R +G +++Q
Sbjct: 551 ERARSDEGQLSPATRGAYRDCLGRLDLQ 578
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 29.6 bits (65), Expect = 6.1
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 271 PNMETGMIYVVQGIYGYHHYMQDRIDDNGWGCAYRSLQTICSWFKHQGYTERSIPTHREI 330
P +E + +Q + + Q R+D WG S++ H+G + +I
Sbjct: 501 PELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLG--SHRGLHQSIEEFRAKI 558
Query: 331 QQALVDAGD-KPATFVGSRQWIGSIEVQ 357
++A D G PAT R +G +++Q
Sbjct: 559 ERARSDEGQLSPATRGAYRDCLGRLDLQ 586
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 29.6 bits (65), Expect = 6.1
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 271 PNMETGMIYVVQGIYGYHHYMQDRIDDNGWGCAYRSLQTICSWFKHQGYTERSIPTHREI 330
P +E + +Q + + Q R+D WG S++ H+G + +I
Sbjct: 542 PELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLG--SHRGLHQSIEEFRAKI 599
Query: 331 QQALVDAGD-KPATFVGSRQWIGSIEVQ 357
++A D G PAT R +G +++Q
Sbjct: 600 ERARSDEGQLSPATRGAYRDCLGRLDLQ 627
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,297,152
Number of Sequences: 37866
Number of extensions: 831488
Number of successful extensions: 1713
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1701
Number of HSP's gapped (non-prelim): 26
length of query: 469
length of database: 18,247,518
effective HSP length: 106
effective length of query: 363
effective length of database: 14,233,722
effective search space: 5166841086
effective search space used: 5166841086
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.