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Search of human proteins with 226246682
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226246682 prostaglandin reductase 2 [Homo sapiens]
(351 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226246682 prostaglandin reductase 2 [Homo sapiens] 714 0.0
gi|226246680 prostaglandin reductase 2 [Homo sapiens] 714 0.0
gi|22748929 prostaglandin reductase 2 [Homo sapiens] 714 0.0
gi|226059159 prostaglandin reductase 1 isoform 1 [Homo sapiens] 203 2e-52
gi|226059133 prostaglandin reductase 1 isoform 1 [Homo sapiens] 203 2e-52
gi|226056130 prostaglandin reductase 1 isoform 2 [Homo sapiens] 166 3e-41
gi|28557745 zinc binding alcohol dehydrogenase domain containing... 91 2e-18
gi|47519420 reticulon 4 interacting protein 1 precursor [Homo sa... 40 0.002
gi|22538446 tumor protein p53 inducible protein 3 [Homo sapiens] 36 0.059
gi|22538444 tumor protein p53 inducible protein 3 [Homo sapiens] 36 0.059
gi|18379349 vesicle amine transport protein 1 [Homo sapiens] 34 0.22
gi|37620210 hypothetical protein LOC116228 [Homo sapiens] 32 1.1
gi|23510356 RIO kinase 1 isoform 1 [Homo sapiens] 31 1.5
gi|23510358 RIO kinase 1 isoform 2 [Homo sapiens] 31 1.5
gi|31543093 galactosidase, beta 1-like 2 [Homo sapiens] 31 1.9
gi|221554518 cyclin L2 isoform D [Homo sapiens] 31 1.9
gi|221554516 cyclin L2 isoform C [Homo sapiens] 31 1.9
gi|88758578 cyclin L2 isoform B [Homo sapiens] 31 1.9
gi|88758580 cyclin L2 isoform A [Homo sapiens] 31 1.9
gi|49640014 ubiquitin associated and SH3 domain containing, A sh... 28 9.4
gi|9507221 ubiquitin associated and SH3 domain containing, A lon... 28 9.4
>gi|226246682 prostaglandin reductase 2 [Homo sapiens]
Length = 351
Score = 714 bits (1844), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT 60
MIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT
Sbjct: 1 MIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT 60
Query: 61 GTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQ 120
GTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQ
Sbjct: 61 GTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQ 120
Query: 121 LVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGC 180
LVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGC
Sbjct: 121 LVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGC 180
Query: 181 SRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTV 240
SRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTV
Sbjct: 181 SRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTV 240
Query: 241 ISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGI 300
ISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGI
Sbjct: 241 ISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGI 300
Query: 301 LQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEEISL 351
LQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEEISL
Sbjct: 301 LQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEEISL 351
>gi|226246680 prostaglandin reductase 2 [Homo sapiens]
Length = 351
Score = 714 bits (1844), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT 60
MIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT
Sbjct: 1 MIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT 60
Query: 61 GTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQ 120
GTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQ
Sbjct: 61 GTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQ 120
Query: 121 LVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGC 180
LVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGC
Sbjct: 121 LVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGC 180
Query: 181 SRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTV 240
SRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTV
Sbjct: 181 SRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTV 240
Query: 241 ISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGI 300
ISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGI
Sbjct: 241 ISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGI 300
Query: 301 LQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEEISL 351
LQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEEISL
Sbjct: 301 LQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEEISL 351
>gi|22748929 prostaglandin reductase 2 [Homo sapiens]
Length = 351
Score = 714 bits (1844), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT 60
MIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT
Sbjct: 1 MIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT 60
Query: 61 GTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQ 120
GTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQ
Sbjct: 61 GTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQ 120
Query: 121 LVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGC 180
LVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGC
Sbjct: 121 LVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGC 180
Query: 181 SRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTV 240
SRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTV
Sbjct: 181 SRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTV 240
Query: 241 ISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGI 300
ISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGI
Sbjct: 241 ISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGI 300
Query: 301 LQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEEISL 351
LQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEEISL
Sbjct: 301 LQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEEISL 351
>gi|226059159 prostaglandin reductase 1 isoform 1 [Homo sapiens]
Length = 329
Score = 203 bits (516), Expect = 2e-52
Identities = 134/331 (40%), Positives = 183/331 (55%), Gaps = 21/331 (6%)
Query: 16 GNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVD 75
G P +F ++ LP + G+V + L+L+VDPYMR D + Q+++VV
Sbjct: 15 GYPTNSDFELKTAELPP-LKNGEVLLEALFLTVDPYMRVAAKRLKEGDTMMGQQVAKVV- 72
Query: 76 GGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDG-HLSYFLGAIG 134
ESK+ L KG V + W T I DG LEK+ + D LS LG +G
Sbjct: 73 --------ESKNVALPKGTIVLASPG-WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVG 123
Query: 135 MPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCI 194
MPGLT+ G+ E + G +T++V+ AAGA GSV GQI GC +VVG G+ EK
Sbjct: 124 MPGLTAYFGLLEICGVKGG--ETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAVGSDEKVA 180
Query: 195 LLTSELGFDAAINYKK-DNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILC 253
L +LGFD NYK +++ E L+++ P G D YFDNVGG S+TVI QM + I +C
Sbjct: 181 YL-QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAIC 239
Query: 254 GQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYK-DKFEPGILQLSQWFKEGKL 312
G IS YN+ P PP P I Q+ R E F+V ++ D + + L +W EGK+
Sbjct: 240 GAISTYNRTGPLPPGPPPEIVIYQELR---MEAFVVYRWQGDARQKALKDLLKWVLEGKI 296
Query: 313 KIKETVINGLENMGAAFQSMMTGGNIGKQIV 343
+ KE +I G ENM AAF M+ G N+GK IV
Sbjct: 297 QYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 327
>gi|226059133 prostaglandin reductase 1 isoform 1 [Homo sapiens]
Length = 329
Score = 203 bits (516), Expect = 2e-52
Identities = 134/331 (40%), Positives = 183/331 (55%), Gaps = 21/331 (6%)
Query: 16 GNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVD 75
G P +F ++ LP + G+V + L+L+VDPYMR D + Q+++VV
Sbjct: 15 GYPTNSDFELKTAELPP-LKNGEVLLEALFLTVDPYMRVAAKRLKEGDTMMGQQVAKVV- 72
Query: 76 GGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDG-HLSYFLGAIG 134
ESK+ L KG V + W T I DG LEK+ + D LS LG +G
Sbjct: 73 --------ESKNVALPKGTIVLASPG-WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVG 123
Query: 135 MPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCI 194
MPGLT+ G+ E + G +T++V+ AAGA GSV GQI GC +VVG G+ EK
Sbjct: 124 MPGLTAYFGLLEICGVKGG--ETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAVGSDEKVA 180
Query: 195 LLTSELGFDAAINYKK-DNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILC 253
L +LGFD NYK +++ E L+++ P G D YFDNVGG S+TVI QM + I +C
Sbjct: 181 YL-QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAIC 239
Query: 254 GQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYK-DKFEPGILQLSQWFKEGKL 312
G IS YN+ P PP P I Q+ R E F+V ++ D + + L +W EGK+
Sbjct: 240 GAISTYNRTGPLPPGPPPEIVIYQELR---MEAFVVYRWQGDARQKALKDLLKWVLEGKI 296
Query: 313 KIKETVINGLENMGAAFQSMMTGGNIGKQIV 343
+ KE +I G ENM AAF M+ G N+GK IV
Sbjct: 297 QYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 327
>gi|226056130 prostaglandin reductase 1 isoform 2 [Homo sapiens]
Length = 301
Score = 166 bits (420), Expect = 3e-41
Identities = 117/304 (38%), Positives = 163/304 (53%), Gaps = 21/304 (6%)
Query: 16 GNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVD 75
G P +F ++ LP + G+V + L+L+VDPYMR D + Q+++VV
Sbjct: 15 GYPTNSDFELKTAELPP-LKNGEVLLEALFLTVDPYMRVAAKRLKEGDTMMGQQVAKVV- 72
Query: 76 GGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDG-HLSYFLGAIG 134
ESK+ L KG V + W T I DG LEK+ + D LS LG +G
Sbjct: 73 --------ESKNVALPKGTIVLASPG-WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVG 123
Query: 135 MPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCI 194
MPGLT+ G+ E + G +T++V+ AAGA GSV GQI GC +VVG G+ EK
Sbjct: 124 MPGLTAYFGLLEICGVKGG--ETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAVGSDEKVA 180
Query: 195 LLTSELGFDAAINYKK-DNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILC 253
L +LGFD NYK +++ E L+++ P G D YFDNVGG S+TVI QM + I +C
Sbjct: 181 YL-QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAIC 239
Query: 254 GQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYK-DKFEPGILQLSQWFKEGKL 312
G IS YN+ P PP P I Q+ R E F+V ++ D + + L +W E K
Sbjct: 240 GAISTYNRTGPLPPGPPPEIVIYQELR---MEAFVVYRWQGDARQKALKDLLKWVLEIKR 296
Query: 313 KIKE 316
+ +E
Sbjct: 297 ENEE 300
>gi|28557745 zinc binding alcohol dehydrogenase domain containing 2
[Homo sapiens]
Length = 377
Score = 90.9 bits (224), Expect = 2e-18
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 137 GLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILL 196
G T+ I ++E G ++ G K ++V+ AAG G A Q+ C V+G C + EK L
Sbjct: 157 GTTAYISLKELGGLSEG--KKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFL 213
Query: 197 TSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQI 256
S LG D INYK + V L++ P GVDV +++VGG + D + + +I+ G I
Sbjct: 214 KS-LGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFI 272
Query: 257 SQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIK- 315
S Y P + + A +++ + + F + +Y K++ + L + G L +
Sbjct: 273 SGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 332
Query: 316 -------ETVINGLENMGAAFQSMMTGGNIGKQIVCISEEIS 350
E GLE++ A M G N GK +V + ++
Sbjct: 333 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPHSVN 374
>gi|47519420 reticulon 4 interacting protein 1 precursor [Homo
sapiens]
Length = 396
Score = 40.4 bits (93), Expect = 0.002
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Query: 93 GDFVTSFYWPWQTK-----VILDGNSLEKVDPQLVDGHLSY--FLGAIGMPGLTSLIGIQ 145
GD V + PW+ V++ GN + L + ++ + + G+
Sbjct: 140 GDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLN 199
Query: 146 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAA 205
+K + K +++ GA+G G+ A Q+ + V +C + L +LG D
Sbjct: 200 DKNC----TGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVCS--QDASELVRKLGADDV 252
Query: 206 INYKKDNVAEQLRESCPAGVDVYFDNVGGN 235
I+YK +V EQL+ P D DNVGG+
Sbjct: 253 IDYKSGSVEEQLKSLKP--FDFILDNVGGS 280
>gi|22538446 tumor protein p53 inducible protein 3 [Homo sapiens]
Length = 332
Score = 35.8 bits (81), Expect = 0.059
Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 132 AIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 191
AI LT+ + G++ AG + ++ +G +G G+ A Q+ G +V G+ +
Sbjct: 120 AIPEAWLTAFQLLHLVGNVQAG-DYVLIHAGLSGV-GTAAIQLTRMAGAIPLV-TAGSQK 176
Query: 192 KCILLTSELGFDAAINYKKDNVAE-QLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 250
K + + +LG A NYKK++ +E L+ + AGV++ D +GG+ + ++ + +
Sbjct: 177 K-LQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRW 235
Query: 251 ILCG 254
+L G
Sbjct: 236 VLYG 239
>gi|22538444 tumor protein p53 inducible protein 3 [Homo sapiens]
Length = 332
Score = 35.8 bits (81), Expect = 0.059
Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 132 AIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 191
AI LT+ + G++ AG + ++ +G +G G+ A Q+ G +V G+ +
Sbjct: 120 AIPEAWLTAFQLLHLVGNVQAG-DYVLIHAGLSGV-GTAAIQLTRMAGAIPLV-TAGSQK 176
Query: 192 KCILLTSELGFDAAINYKKDNVAE-QLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 250
K + + +LG A NYKK++ +E L+ + AGV++ D +GG+ + ++ + +
Sbjct: 177 K-LQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRW 235
Query: 251 ILCG 254
+L G
Sbjct: 236 VLYG 239
>gi|18379349 vesicle amine transport protein 1 [Homo sapiens]
Length = 393
Score = 33.9 bits (76), Expect = 0.22
Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 63 DYITPWQLSQVVDGGGIGIIEESKHTNLTKGD--FVTSFYWPWQTKVILDGNSLEKVDPQ 120
D + P ++ ++G G+ I ++ GD V + WQ +V ++ V
Sbjct: 101 DRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEV-----TVPSVQTF 155
Query: 121 LVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLG 179
L+ +++ A+ + +T+ + + + G++ G + ++V AAG G A Q+ +
Sbjct: 156 LIPEAMTFEEAAALLVNYITAYMVLFDFGNLQPGHS--VLVHMAAGGVGMAAVQLCRTVE 213
Query: 180 CSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDT 239
V G + L E G I+Y + +++++ P GVD+ D +GG SDT
Sbjct: 214 NVTVFGTASASKHEAL--KENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGG--SDT 269
>gi|37620210 hypothetical protein LOC116228 [Homo sapiens]
Length = 118
Score = 31.6 bits (70), Expect = 1.1
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 165 GACGSVAGQIGHFLGCSRV-----VGICGTHEKCILLTSELGFDAAINYKKDNVAEQL 217
G+ GSV GHFL SR+ VG+ G IL+T F NY K + E++
Sbjct: 37 GSLGSVVAGFGHFLFTSRIRRSCDVGVGG----FILVTLGCWFHCRYNYAKQRIQERI 90
>gi|23510356 RIO kinase 1 isoform 1 [Homo sapiens]
Length = 568
Score = 31.2 bits (69), Expect = 1.5
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 1 MIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT 60
M+ V++ S GK+ P L N+ + + R LYL V YMR RM +D
Sbjct: 269 MLRSHVLVMSFIGKDDMPAP---------LLKNVQLSESKARELYLQVIQYMR-RMYQDA 318
Query: 61 GTDYITPWQLSQVVDGGGIGIIEESK 86
+ + + + GGG+ II+ S+
Sbjct: 319 RLVHADLSEFNMLYHGGGVYIIDVSQ 344
>gi|23510358 RIO kinase 1 isoform 2 [Homo sapiens]
Length = 327
Score = 31.2 bits (69), Expect = 1.5
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 1 MIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT 60
M+ V++ S GK+ P L N+ + + R LYL V YMR RM +D
Sbjct: 28 MLRSHVLVMSFIGKDDMPAP---------LLKNVQLSESKARELYLQVIQYMR-RMYQDA 77
Query: 61 GTDYITPWQLSQVVDGGGIGIIEESK 86
+ + + + GGG+ II+ S+
Sbjct: 78 RLVHADLSEFNMLYHGGGVYIIDVSQ 103
>gi|31543093 galactosidase, beta 1-like 2 [Homo sapiens]
Length = 636
Score = 30.8 bits (68), Expect = 1.9
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 225 VDVYFDNVGGNISDTVISQMNENSHIILC---GQISQYNKDVPYPPPLSPAIEAIQKERN 281
VD+YFD++ +S V Q II + YNKD Y P + A+E +R
Sbjct: 171 VDLYFDHL---MSRVVPLQYKRGGPIIAVQVENEYGSYNKDPAYMPYVKKALE----DRG 223
Query: 282 ITRERFLVLNYKDKFEPGILQ 302
I E L + KD GI+Q
Sbjct: 224 IV-ELLLTSDNKDGLSKGIVQ 243
>gi|221554518 cyclin L2 isoform D [Homo sapiens]
Length = 227
Score = 30.8 bits (68), Expect = 1.9
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 152 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD 211
AGS +GA G+ G+ +G G +G G+ T E C+L +L F +++ D
Sbjct: 11 AGSAAPAAAAGAPGSGGAPSGSQGVLIGDRLYSGVLITLENCLLPDDKLRFTPSMSSGLD 70
Query: 212 NVAE 215
E
Sbjct: 71 TDTE 74
>gi|221554516 cyclin L2 isoform C [Homo sapiens]
Length = 236
Score = 30.8 bits (68), Expect = 1.9
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 152 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD 211
AGS +GA G+ G+ +G G +G G+ T E C+L +L F +++ D
Sbjct: 11 AGSAAPAAAAGAPGSGGAPSGSQGVLIGDRLYSGVLITLENCLLPDDKLRFTPSMSSGLD 70
Query: 212 NVAE 215
E
Sbjct: 71 TDTE 74
>gi|88758578 cyclin L2 isoform B [Homo sapiens]
Length = 226
Score = 30.8 bits (68), Expect = 1.9
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 152 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD 211
AGS +GA G+ G+ +G G +G G+ T E C+L +L F +++ D
Sbjct: 11 AGSAAPAAAAGAPGSGGAPSGSQGVLIGDRLYSGVLITLENCLLPDDKLRFTPSMSSGLD 70
Query: 212 NVAE 215
E
Sbjct: 71 TDTE 74
>gi|88758580 cyclin L2 isoform A [Homo sapiens]
Length = 520
Score = 30.8 bits (68), Expect = 1.9
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 152 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD 211
AGS +GA G+ G+ +G G +G G+ T E C+L +L F +++ D
Sbjct: 11 AGSAAPAAAAGAPGSGGAPSGSQGVLIGDRLYSGVLITLENCLLPDDKLRFTPSMSSGLD 70
Query: 212 NVAE 215
E
Sbjct: 71 TDTE 74
>gi|49640014 ubiquitin associated and SH3 domain containing, A short
form [Homo sapiens]
Length = 623
Score = 28.5 bits (62), Expect = 9.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 270 SPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQW 306
SPA+ +Q + I E L K + EPGI + ++W
Sbjct: 443 SPALRCVQTAKLILEELKLEKKIKIRVEPGIFEWTKW 479
>gi|9507221 ubiquitin associated and SH3 domain containing, A long
form [Homo sapiens]
Length = 661
Score = 28.5 bits (62), Expect = 9.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 270 SPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQW 306
SPA+ +Q + I E L K + EPGI + ++W
Sbjct: 481 SPALRCVQTAKLILEELKLEKKIKIRVEPGIFEWTKW 517
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.137 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,384,749
Number of Sequences: 37866
Number of extensions: 574193
Number of successful extensions: 1415
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1376
Number of HSP's gapped (non-prelim): 23
length of query: 351
length of database: 18,247,518
effective HSP length: 103
effective length of query: 248
effective length of database: 14,347,320
effective search space: 3558135360
effective search space used: 3558135360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.