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Search of human proteins with 22547144
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22547144 F-box only protein 32 isoform 2 [Homo sapiens]
(210 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22547144 F-box only protein 32 isoform 2 [Homo sapiens] 435 e-122
gi|17158037 F-box only protein 32 isoform 1 [Homo sapiens] 435 e-122
gi|34878765 F-box only protein 25 isoform 2 [Homo sapiens] 273 8e-74
gi|34878757 F-box only protein 25 isoform 3 [Homo sapiens] 273 8e-74
gi|34878769 F-box only protein 25 isoform 1 [Homo sapiens] 265 2e-71
gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [H... 35 0.046
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H... 35 0.046
gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [H... 35 0.046
gi|30795121 F-box and WD repeat domain containing 8 isoform 2 [H... 34 0.10
gi|30795123 F-box and WD repeat domain containing 8 isoform 1 [H... 34 0.10
gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens] 31 0.67
gi|156105693 PPAR-alpha interacting complex protein 285 isoform ... 30 1.5
gi|156105695 PPAR-alpha interacting complex protein 285 isoform ... 30 1.5
gi|39812019 amino-terminal enhancer of split isoform a [Homo sap... 30 1.9
gi|5706731 amino-terminal enhancer of split isoform b [Homo sapi... 30 1.9
gi|20149693 fuzzy homolog [Homo sapiens] 29 2.5
gi|145580615 KRI1 homolog [Homo sapiens] 29 3.3
gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens] 29 3.3
gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens] 28 4.3
gi|157502184 kinesin family member 6 [Homo sapiens] 28 4.3
gi|62526031 neurochondrin isoform 2 [Homo sapiens] 28 5.6
gi|24307949 neurochondrin isoform 1 [Homo sapiens] 28 5.6
gi|62526029 neurochondrin isoform 1 [Homo sapiens] 28 5.6
gi|24497519 mannosidase, alpha, class 1A, member 1 [Homo sapiens] 28 7.4
gi|32483361 apoptotic peptidase activating factor 1 isoform d [H... 28 7.4
gi|32483359 apoptotic peptidase activating factor 1 isoform c [H... 28 7.4
gi|4502123 apoptotic peptidase activating factor 1 isoform b [Ho... 28 7.4
gi|7108333 apoptotic peptidase activating factor 1 isoform a [Ho... 28 7.4
gi|39812027 amino-terminal enhancer of split isoform c [Homo sap... 28 7.4
gi|19387844 muscleblind-like 3 isoform G [Homo sapiens] 27 9.6
>gi|22547144 F-box only protein 32 isoform 2 [Homo sapiens]
Length = 210
Score = 435 bits (1118), Expect = e-122
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MNILEKVVLKVLEDQQNIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILH 60
MNILEKVVLKVLEDQQNIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILH
Sbjct: 1 MNILEKVVLKVLEDQQNIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILH 60
Query: 61 WQQQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLL 120
WQQQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLL
Sbjct: 61 WQQQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLL 120
Query: 121 WKKLCQYHFSERQIRKRLILSDKGQLDWKKMYFKLVRCYPRKEQYGDTLQLCKHCHILSW 180
WKKLCQYHFSERQIRKRLILSDKGQLDWKKMYFKLVRCYPRKEQYGDTLQLCKHCHILSW
Sbjct: 121 WKKLCQYHFSERQIRKRLILSDKGQLDWKKMYFKLVRCYPRKEQYGDTLQLCKHCHILSW 180
Query: 181 KGTDHPCTANNPESCSVSLSPQDFINLFKF 210
KGTDHPCTANNPESCSVSLSPQDFINLFKF
Sbjct: 181 KGTDHPCTANNPESCSVSLSPQDFINLFKF 210
>gi|17158037 F-box only protein 32 isoform 1 [Homo sapiens]
Length = 355
Score = 435 bits (1118), Expect = e-122
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MNILEKVVLKVLEDQQNIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILH 60
MNILEKVVLKVLEDQQNIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILH
Sbjct: 146 MNILEKVVLKVLEDQQNIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILH 205
Query: 61 WQQQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLL 120
WQQQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLL
Sbjct: 206 WQQQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLL 265
Query: 121 WKKLCQYHFSERQIRKRLILSDKGQLDWKKMYFKLVRCYPRKEQYGDTLQLCKHCHILSW 180
WKKLCQYHFSERQIRKRLILSDKGQLDWKKMYFKLVRCYPRKEQYGDTLQLCKHCHILSW
Sbjct: 266 WKKLCQYHFSERQIRKRLILSDKGQLDWKKMYFKLVRCYPRKEQYGDTLQLCKHCHILSW 325
Query: 181 KGTDHPCTANNPESCSVSLSPQDFINLFKF 210
KGTDHPCTANNPESCSVSLSPQDFINLFKF
Sbjct: 326 KGTDHPCTANNPESCSVSLSPQDFINLFKF 355
>gi|34878765 F-box only protein 25 isoform 2 [Homo sapiens]
Length = 358
Score = 273 bits (698), Expect = 8e-74
Identities = 126/209 (60%), Positives = 163/209 (77%)
Query: 2 NILEKVVLKVLEDQQNIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILHW 61
NIL+K+V KVL+D N RLI++LLQ L ++LC L++ VGKSVLVGNIN+W+ R+ETIL W
Sbjct: 150 NILDKIVQKVLDDHHNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAW 209
Query: 62 QQQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLW 121
QQQL ++Q+T+ GLT +DLPL + NI+ R SDG D+++LGQ P L++LSEDR LW
Sbjct: 210 QQQLQDLQMTKQVNNGLTLSDLPLHMLNNILYRFSDGWDIITLGQVTPTLYMLSEDRQLW 269
Query: 122 KKLCQYHFSERQIRKRLILSDKGQLDWKKMYFKLVRCYPRKEQYGDTLQLCKHCHILSWK 181
KKLCQYHF+E+Q + LILS+KG ++WK MYF L + YP KEQYGDTL C+HC IL WK
Sbjct: 270 KKLCQYHFAEKQFCRHLILSEKGHIEWKLMYFALQKHYPAKEQYGDTLHFCRHCSILFWK 329
Query: 182 GTDHPCTANNPESCSVSLSPQDFINLFKF 210
+ HPCTA +P+SC +SPQ FI+LFKF
Sbjct: 330 DSGHPCTAADPDSCFTPVSPQHFIDLFKF 358
>gi|34878757 F-box only protein 25 isoform 3 [Homo sapiens]
Length = 291
Score = 273 bits (698), Expect = 8e-74
Identities = 126/209 (60%), Positives = 163/209 (77%)
Query: 2 NILEKVVLKVLEDQQNIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILHW 61
NIL+K+V KVL+D N RLI++LLQ L ++LC L++ VGKSVLVGNIN+W+ R+ETIL W
Sbjct: 83 NILDKIVQKVLDDHHNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAW 142
Query: 62 QQQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLW 121
QQQL ++Q+T+ GLT +DLPL + NI+ R SDG D+++LGQ P L++LSEDR LW
Sbjct: 143 QQQLQDLQMTKQVNNGLTLSDLPLHMLNNILYRFSDGWDIITLGQVTPTLYMLSEDRQLW 202
Query: 122 KKLCQYHFSERQIRKRLILSDKGQLDWKKMYFKLVRCYPRKEQYGDTLQLCKHCHILSWK 181
KKLCQYHF+E+Q + LILS+KG ++WK MYF L + YP KEQYGDTL C+HC IL WK
Sbjct: 203 KKLCQYHFAEKQFCRHLILSEKGHIEWKLMYFALQKHYPAKEQYGDTLHFCRHCSILFWK 262
Query: 182 GTDHPCTANNPESCSVSLSPQDFINLFKF 210
+ HPCTA +P+SC +SPQ FI+LFKF
Sbjct: 263 DSGHPCTAADPDSCFTPVSPQHFIDLFKF 291
>gi|34878769 F-box only protein 25 isoform 1 [Homo sapiens]
Length = 367
Score = 265 bits (678), Expect = 2e-71
Identities = 126/218 (57%), Positives = 163/218 (74%), Gaps = 9/218 (4%)
Query: 2 NILEKVVLKVLEDQQNIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILHW 61
NIL+K+V KVL+D N RLI++LLQ L ++LC L++ VGKSVLVGNIN+W+ R+ETIL W
Sbjct: 150 NILDKIVQKVLDDHHNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAW 209
Query: 62 QQQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLW 121
QQQL ++Q+T+ GLT +DLPL + NI+ R SDG D+++LGQ P L++LSEDR LW
Sbjct: 210 QQQLQDLQMTKQVNNGLTLSDLPLHMLNNILYRFSDGWDIITLGQVTPTLYMLSEDRQLW 269
Query: 122 KKLCQYHFSERQIRKRLILSDKGQLDWKKMYFKLVRCYPRKEQYGDTLQLCKHCHILSW- 180
KKLCQYHF+E+Q + LILS+KG ++WK MYF L + YP KEQYGDTL C+HC IL W
Sbjct: 270 KKLCQYHFAEKQFCRHLILSEKGHIEWKLMYFALQKHYPAKEQYGDTLHFCRHCSILFWK 329
Query: 181 --------KGTDHPCTANNPESCSVSLSPQDFINLFKF 210
K + HPCTA +P+SC +SPQ FI+LFKF
Sbjct: 330 DYHLALLFKDSGHPCTAADPDSCFTPVSPQHFIDLFKF 367
>gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [Homo
sapiens]
Length = 589
Score = 35.0 bits (79), Expect = 0.046
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 68 IQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLCQY 127
+Q+ P F+ + LP L L ++ L + +DL+ Q +L+ED LLW++ C+
Sbjct: 151 MQVIEPQFQRDFISLLPKELALYVLSFL-EPKDLLQAAQTCRYWRILAEDNLLWREKCKE 209
Query: 128 HFSERQI---RKRLILSDKGQLDWKKMYFK 154
+ + R+++I WK Y +
Sbjct: 210 EGIDEPLHIKRRKVIKPGFIHSPWKSAYIR 239
>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
sapiens]
Length = 707
Score = 35.0 bits (79), Expect = 0.046
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 68 IQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLCQY 127
+Q+ P F+ + LP L L ++ L + +DL+ Q +L+ED LLW++ C+
Sbjct: 269 MQVIEPQFQRDFISLLPKELALYVLSFL-EPKDLLQAAQTCRYWRILAEDNLLWREKCKE 327
Query: 128 HFSERQI---RKRLILSDKGQLDWKKMYFK 154
+ + R+++I WK Y +
Sbjct: 328 EGIDEPLHIKRRKVIKPGFIHSPWKSAYIR 357
>gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [Homo
sapiens]
Length = 627
Score = 35.0 bits (79), Expect = 0.046
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 68 IQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLCQY 127
+Q+ P F+ + LP L L ++ L + +DL+ Q +L+ED LLW++ C+
Sbjct: 189 MQVIEPQFQRDFISLLPKELALYVLSFL-EPKDLLQAAQTCRYWRILAEDNLLWREKCKE 247
Query: 128 HFSERQI---RKRLILSDKGQLDWKKMYFK 154
+ + R+++I WK Y +
Sbjct: 248 EGIDEPLHIKRRKVIKPGFIHSPWKSAYIR 277
>gi|30795121 F-box and WD repeat domain containing 8 isoform 2 [Homo
sapiens]
Length = 532
Score = 33.9 bits (76), Expect = 0.10
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 83 LPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLCQ 126
LP L +NI Q L D ++L Q + V++ED +LW +LCQ
Sbjct: 53 LPYELAINIFQYL-DRKELGRCAQVSKTWKVIAEDEVLWYRLCQ 95
>gi|30795123 F-box and WD repeat domain containing 8 isoform 1 [Homo
sapiens]
Length = 598
Score = 33.9 bits (76), Expect = 0.10
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 83 LPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLCQ 126
LP L +NI Q L D ++L Q + V++ED +LW +LCQ
Sbjct: 119 LPYELAINIFQYL-DRKELGRCAQVSKTWKVIAEDEVLWYRLCQ 161
>gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens]
Length = 580
Score = 31.2 bits (69), Expect = 0.67
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 99 RDLVSLGQAAPDLHVLSEDRLLWKKLCQYHFSERQIRKRLILSDKGQLDWKK 150
RDLV+LGQ H + + +W+++C R++ RL G WK+
Sbjct: 57 RDLVALGQTCRYFHEVCDGEGVWRRIC------RRLSPRLQDQGSGVRPWKR 102
>gi|156105693 PPAR-alpha interacting complex protein 285 isoform 1
[Homo sapiens]
Length = 2649
Score = 30.0 bits (66), Expect = 1.5
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 109 PDLHVLSEDRLLWKKLCQYHFSERQIRKRLILSDKGQLDWKKMYFKLVRCY-------PR 161
PD H L+ + LWK+L + +R ++ +KG+ ++ ++ R + R
Sbjct: 1816 PDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEASQRRELVQVQRSHCGHFLEVAR 1875
Query: 162 KEQYGDTLQL 171
+ GDTLQ+
Sbjct: 1876 ELGSGDTLQV 1885
>gi|156105695 PPAR-alpha interacting complex protein 285 isoform 2
[Homo sapiens]
Length = 2080
Score = 30.0 bits (66), Expect = 1.5
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 109 PDLHVLSEDRLLWKKLCQYHFSERQIRKRLILSDKGQLDWKKMYFKLVRCY-------PR 161
PD H L+ + LWK+L + +R ++ +KG+ ++ ++ R + R
Sbjct: 1247 PDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEASQRRELVQVQRSHCGHFLEVAR 1306
Query: 162 KEQYGDTLQL 171
+ GDTLQ+
Sbjct: 1307 ELGSGDTLQV 1316
>gi|39812019 amino-terminal enhancer of split isoform a [Homo
sapiens]
Length = 264
Score = 29.6 bits (65), Expect = 1.9
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 62 QQQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDR 118
+QQL Q+++ L T LP+ LQ + +S G L+SL H+ ED+
Sbjct: 191 RQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGTGLLSLSALGSQAHLSKEDK 247
>gi|5706731 amino-terminal enhancer of split isoform b [Homo
sapiens]
Length = 197
Score = 29.6 bits (65), Expect = 1.9
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 62 QQQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDR 118
+QQL Q+++ L T LP+ LQ + +S G L+SL H+ ED+
Sbjct: 124 RQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGTGLLSLSALGSQAHLSKEDK 180
>gi|20149693 fuzzy homolog [Homo sapiens]
Length = 418
Score = 29.3 bits (64), Expect = 2.5
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 7 VVLKVLEDQQNIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWV 52
V+L LE+ NIR + L + L S C + +G S L+G++ V
Sbjct: 107 VLLVGLEELTNIRNVERLKKDLRASYCLIDSFLGDSELIGDLTQCV 152
>gi|145580615 KRI1 homolog [Homo sapiens]
Length = 709
Score = 28.9 bits (63), Expect = 3.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 122 KKLCQYHFSERQIRKRLILSDKGQLDWKK 150
KK C Y + ++R + S K Q WKK
Sbjct: 561 KKTCMYRSEQEELRDKRAYSQKAQNSWKK 589
>gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens]
Length = 318
Score = 28.9 bits (63), Expect = 3.3
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 21/95 (22%)
Query: 99 RDLVSLGQAAPDLHVLSEDRLLWKKLCQYHFSERQIRKRLILSDKGQLDWKKMYFKLV-- 156
RDLV+LGQ H + + +W+++C R++ RL D K +YF+
Sbjct: 57 RDLVALGQTCRYFHEVCDGEGVWRRIC------RRLSPRL-----QDQDTKGLYFQAFGG 105
Query: 157 --RCYPRK------EQYGDTLQLCKHCHILSWKGT 183
RC + Y L H IL + GT
Sbjct: 106 RRRCLSKSVAPLLAHGYRRFLPTKDHVFILDYVGT 140
>gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens]
Length = 694
Score = 28.5 bits (62), Expect = 4.3
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 112 HVLSEDRLLWKKLCQYHFSERQIRKRLILSDKGQLDWKKMYFKLVRCYPRK 162
++ S +L+ K L F+E Q +KRL L WK+ KL+R +PRK
Sbjct: 495 NITSYLQLIEKCLTHEAFTETQ-KKRL-------LSWKQQVLKLLRTFPRK 537
>gi|157502184 kinesin family member 6 [Homo sapiens]
Length = 814
Score = 28.5 bits (62), Expect = 4.3
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 1 MNILEKVVLKVLEDQQNIRLIREL------LQTLYTSLCTLVQRVGKSVLVGNINMWVYR 54
+ I E + + ++ DQQ +L +L +T++T L L + L+ + +
Sbjct: 620 LGISENMAVPLMPDQQEEKLRSQLEEEKRRYKTMFTRLKALKVEIEHLQLLMDKAKVKLQ 679
Query: 55 METILHWQQQLNNIQITRPAFKGLTFT 81
E + W ++ N+Q+ PA L T
Sbjct: 680 KEFEVWWAEEATNLQVNSPAVNSLDHT 706
>gi|62526031 neurochondrin isoform 2 [Homo sapiens]
Length = 712
Score = 28.1 bits (61), Expect = 5.6
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Query: 24 LLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILHWQQQLNNIQITRPAFKGLTFTDL 83
L+ TL TSL LVQ+ G+ +L N+ M +L L PA +G F
Sbjct: 528 LMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQG----TPASRGF-FAAA 582
Query: 84 PLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLW 121
L L + + R + G D L + + ++ + LW
Sbjct: 583 ILFLSQSHVARATPGSDQAVLALSPEYEGIWADLQELW 620
>gi|24307949 neurochondrin isoform 1 [Homo sapiens]
Length = 729
Score = 28.1 bits (61), Expect = 5.6
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Query: 24 LLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILHWQQQLNNIQITRPAFKGLTFTDL 83
L+ TL TSL LVQ+ G+ +L N+ M +L L PA +G F
Sbjct: 545 LMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQG----TPASRGF-FAAA 599
Query: 84 PLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLW 121
L L + + R + G D L + + ++ + LW
Sbjct: 600 ILFLSQSHVARATPGSDQAVLALSPEYEGIWADLQELW 637
>gi|62526029 neurochondrin isoform 1 [Homo sapiens]
Length = 729
Score = 28.1 bits (61), Expect = 5.6
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Query: 24 LLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILHWQQQLNNIQITRPAFKGLTFTDL 83
L+ TL TSL LVQ+ G+ +L N+ M +L L PA +G F
Sbjct: 545 LMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQG----TPASRGF-FAAA 599
Query: 84 PLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLW 121
L L + + R + G D L + + ++ + LW
Sbjct: 600 ILFLSQSHVARATPGSDQAVLALSPEYEGIWADLQELW 637
>gi|24497519 mannosidase, alpha, class 1A, member 1 [Homo sapiens]
Length = 653
Score = 27.7 bits (60), Expect = 7.4
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 11/51 (21%)
Query: 136 KRLILSDKGQLDWKKMYFKLVRCYP----RKEQYGDTLQLCKHCHILSWKG 182
K ++SDK L+ KKMYF V+ RK G T +I WKG
Sbjct: 421 KAWLMSDKTDLEAKKMYFDAVQAIETHLIRKSSSGLT-------YIAEWKG 464
>gi|32483361 apoptotic peptidase activating factor 1 isoform d [Homo
sapiens]
Length = 1205
Score = 27.7 bits (60), Expect = 7.4
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Query: 17 NIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILHWQQQLNNIQITRPAFK 76
++ ++RE ++ YT L L + V V I +W E + Q+ N +
Sbjct: 371 SVEMLREDIKDYYTDLSILQKDVKVPTKVLCI-LWDMETEEVEDILQEFVNKSLLFCDRN 429
Query: 77 GLTFTDLPLCLQLNIM-----QRLSD-GRDLVSLGQAAPDLHVLS---EDRLLWKKLCQY 127
G +F LQ++ + +L D + +++ Q H LS ED + W Y
Sbjct: 430 GKSFRYYLHDLQVDFLTEKNCSQLQDLHKKIITQFQRYHQPHTLSPDQEDCMYWYNFLAY 489
Query: 128 HFSERQIRKRLILSDKGQLDWKKMYFKLV 156
H + ++ K L + LDW K +LV
Sbjct: 490 HMASAKMHKEL-CALMFSLDWIKAKTELV 517
>gi|32483359 apoptotic peptidase activating factor 1 isoform c [Homo
sapiens]
Length = 1248
Score = 27.7 bits (60), Expect = 7.4
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Query: 17 NIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILHWQQQLNNIQITRPAFK 76
++ ++RE ++ YT L L + V V I +W E + Q+ N +
Sbjct: 371 SVEMLREDIKDYYTDLSILQKDVKVPTKVLCI-LWDMETEEVEDILQEFVNKSLLFCDRN 429
Query: 77 GLTFTDLPLCLQLNIM-----QRLSD-GRDLVSLGQAAPDLHVLS---EDRLLWKKLCQY 127
G +F LQ++ + +L D + +++ Q H LS ED + W Y
Sbjct: 430 GKSFRYYLHDLQVDFLTEKNCSQLQDLHKKIITQFQRYHQPHTLSPDQEDCMYWYNFLAY 489
Query: 128 HFSERQIRKRLILSDKGQLDWKKMYFKLV 156
H + ++ K L + LDW K +LV
Sbjct: 490 HMASAKMHKEL-CALMFSLDWIKAKTELV 517
>gi|4502123 apoptotic peptidase activating factor 1 isoform b [Homo
sapiens]
Length = 1194
Score = 27.7 bits (60), Expect = 7.4
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Query: 17 NIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILHWQQQLNNIQITRPAFK 76
++ ++RE ++ YT L L + V V I +W E + Q+ N +
Sbjct: 360 SVEMLREDIKDYYTDLSILQKDVKVPTKVLCI-LWDMETEEVEDILQEFVNKSLLFCDRN 418
Query: 77 GLTFTDLPLCLQLNIM-----QRLSD-GRDLVSLGQAAPDLHVLS---EDRLLWKKLCQY 127
G +F LQ++ + +L D + +++ Q H LS ED + W Y
Sbjct: 419 GKSFRYYLHDLQVDFLTEKNCSQLQDLHKKIITQFQRYHQPHTLSPDQEDCMYWYNFLAY 478
Query: 128 HFSERQIRKRLILSDKGQLDWKKMYFKLV 156
H + ++ K L + LDW K +LV
Sbjct: 479 HMASAKMHKEL-CALMFSLDWIKAKTELV 506
>gi|7108333 apoptotic peptidase activating factor 1 isoform a [Homo
sapiens]
Length = 1237
Score = 27.7 bits (60), Expect = 7.4
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Query: 17 NIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILHWQQQLNNIQITRPAFK 76
++ ++RE ++ YT L L + V V I +W E + Q+ N +
Sbjct: 360 SVEMLREDIKDYYTDLSILQKDVKVPTKVLCI-LWDMETEEVEDILQEFVNKSLLFCDRN 418
Query: 77 GLTFTDLPLCLQLNIM-----QRLSD-GRDLVSLGQAAPDLHVLS---EDRLLWKKLCQY 127
G +F LQ++ + +L D + +++ Q H LS ED + W Y
Sbjct: 419 GKSFRYYLHDLQVDFLTEKNCSQLQDLHKKIITQFQRYHQPHTLSPDQEDCMYWYNFLAY 478
Query: 128 HFSERQIRKRLILSDKGQLDWKKMYFKLV 156
H + ++ K L + LDW K +LV
Sbjct: 479 HMASAKMHKEL-CALMFSLDWIKAKTELV 506
>gi|39812027 amino-terminal enhancer of split isoform c [Homo
sapiens]
Length = 196
Score = 27.7 bits (60), Expect = 7.4
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 63 QQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDR 118
+QL Q+++ L T LP+ LQ + +S G L+SL H+ ED+
Sbjct: 124 RQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGTGLLSLSALGSQAHLSKEDK 179
>gi|19387844 muscleblind-like 3 isoform G [Homo sapiens]
Length = 354
Score = 27.3 bits (59), Expect = 9.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 57 TILHWQQQLNNIQITRPAF 75
T+ H QQ L N+Q+ +PAF
Sbjct: 286 TVFHCQQALTNLQLPQPAF 304
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.139 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,025,465
Number of Sequences: 37866
Number of extensions: 331679
Number of successful extensions: 913
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 890
Number of HSP's gapped (non-prelim): 32
length of query: 210
length of database: 18,247,518
effective HSP length: 98
effective length of query: 112
effective length of database: 14,536,650
effective search space: 1628104800
effective search space used: 1628104800
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.