BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|115527078 spindlin family, member 3 [Homo sapiens] (258 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|115527078 spindlin family, member 3 [Homo sapiens] 530 e-151 gi|112293285 spindlin [Homo sapiens] 454 e-128 gi|56682949 spindlin-like protein 2 [Homo sapiens] 411 e-115 gi|56682947 spindlin-like protein 2 [Homo sapiens] 411 e-115 gi|56682945 spindlin-like protein 2 [Homo sapiens] 411 e-115 gi|117606320 spindlin family, member 2 [Homo sapiens] 410 e-115 gi|108796661 spindlin family, member 4 [Homo sapiens] 357 7e-99 gi|122937416 hypothetical protein LOC85452 [Homo sapiens] 30 2.7 gi|111955326 MLX interacting protein [Homo sapiens] 29 3.6 gi|239756714 PREDICTED: hypothetical protein XP_002345030 [Homo ... 29 4.6 gi|239751209 PREDICTED: hypothetical protein XP_002347757 [Homo ... 29 4.6 gi|239745699 PREDICTED: hypothetical protein XP_002343529 [Homo ... 29 4.6 gi|45387955 hypothetical protein LOC125988 [Homo sapiens] 29 4.6 gi|37574618 hemogen [Homo sapiens] 28 7.9 gi|37574622 hemogen [Homo sapiens] 28 7.9 >gi|115527078 spindlin family, member 3 [Homo sapiens] Length = 258 Score = 530 bits (1365), Expect = e-151 Identities = 258/258 (100%), Positives = 258/258 (100%) Query: 1 MKTPFGKAAAGQRSRTGAGHGSVSVTMIKRKAAHKKHRSRPTSQPRGNIVGCRIQHGWKD 60 MKTPFGKAAAGQRSRTGAGHGSVSVTMIKRKAAHKKHRSRPTSQPRGNIVGCRIQHGWKD Sbjct: 1 MKTPFGKAAAGQRSRTGAGHGSVSVTMIKRKAAHKKHRSRPTSQPRGNIVGCRIQHGWKD 60 Query: 61 GDEPLTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHRDERVSSLEVLPNRVASSRIS 120 GDEPLTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHRDERVSSLEVLPNRVASSRIS Sbjct: 61 GDEPLTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHRDERVSSLEVLPNRVASSRIS 120 Query: 121 DTHLAEIMVGKAVEHIFETEEGSKNEWRGMVLAQAPVMNTWFYITYEKDPVLYMYQLLDD 180 DTHLAEIMVGKAVEHIFETEEGSKNEWRGMVLAQAPVMNTWFYITYEKDPVLYMYQLLDD Sbjct: 121 DTHLAEIMVGKAVEHIFETEEGSKNEWRGMVLAQAPVMNTWFYITYEKDPVLYMYQLLDD 180 Query: 181 YKDGDLRILQDSNDSPLAEREPGEVIDSLVGKQVEYAKDDGSKRTGMVIHQVEAKPSVYF 240 YKDGDLRILQDSNDSPLAEREPGEVIDSLVGKQVEYAKDDGSKRTGMVIHQVEAKPSVYF Sbjct: 181 YKDGDLRILQDSNDSPLAEREPGEVIDSLVGKQVEYAKDDGSKRTGMVIHQVEAKPSVYF 240 Query: 241 IKFDDDFHIYVYDLVKTS 258 IKFDDDFHIYVYDLVKTS Sbjct: 241 IKFDDDFHIYVYDLVKTS 258 >gi|112293285 spindlin [Homo sapiens] Length = 262 Score = 454 bits (1168), Expect = e-128 Identities = 218/263 (82%), Positives = 241/263 (91%), Gaps = 6/263 (2%) Query: 1 MKTPFGKAAAGQRSRTGAGHGSVSVTMIKRKAAHKKHRS-----RPTSQPRGNIVGCRIQ 55 MKTPFGK GQRSR AGH VS M+K++ +HKKHRS +P SQPR NIVGCRIQ Sbjct: 1 MKTPFGKTP-GQRSRADAGHAGVSANMMKKRTSHKKHRSSVGPSKPVSQPRRNIVGCRIQ 59 Query: 56 HGWKDGDEPLTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHRDERVSSLEVLPNRVA 115 HGWK+G+ P+TQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLEL++DERVS+LEVLP+RVA Sbjct: 60 HGWKEGNGPVTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELNKDERVSALEVLPDRVA 119 Query: 116 SSRISDTHLAEIMVGKAVEHIFETEEGSKNEWRGMVLAQAPVMNTWFYITYEKDPVLYMY 175 +SRISD HLA+ M+GKAVEH+FETE+GSK+EWRGMVLA+APVMNTWFYITYEKDPVLYMY Sbjct: 120 TSRISDAHLADTMIGKAVEHMFETEDGSKDEWRGMVLARAPVMNTWFYITYEKDPVLYMY 179 Query: 176 QLLDDYKDGDLRILQDSNDSPLAEREPGEVIDSLVGKQVEYAKDDGSKRTGMVIHQVEAK 235 QLLDDYK+GDLRI+ DSNDSP AEREPGEV+DSLVGKQVEYAK+DGSKRTGMVIHQVEAK Sbjct: 180 QLLDDYKEGDLRIMPDSNDSPPAEREPGEVVDSLVGKQVEYAKEDGSKRTGMVIHQVEAK 239 Query: 236 PSVYFIKFDDDFHIYVYDLVKTS 258 PSVYFIKFDDDFHIYVYDLVKTS Sbjct: 240 PSVYFIKFDDDFHIYVYDLVKTS 262 >gi|56682949 spindlin-like protein 2 [Homo sapiens] Length = 258 Score = 411 bits (1057), Expect = e-115 Identities = 192/258 (74%), Positives = 220/258 (85%) Query: 1 MKTPFGKAAAGQRSRTGAGHGSVSVTMIKRKAAHKKHRSRPTSQPRGNIVGCRIQHGWKD 60 MKTP + A GQ++R AG + S M K+K + KK R RP+SQPR NIVGCRI HGWK+ Sbjct: 1 MKTPNAQEAEGQQTRAAAGRATGSANMTKKKVSQKKQRGRPSSQPRRNIVGCRISHGWKE 60 Query: 61 GDEPLTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHRDERVSSLEVLPNRVASSRIS 120 GDEP+TQWKGTVLDQVP+NPSLYL+KYDG DCVYGLELHRDERV SL++L +RVASS IS Sbjct: 61 GDEPITQWKGTVLDQVPINPSLYLVKYDGIDCVYGLELHRDERVLSLKILSDRVASSHIS 120 Query: 121 DTHLAEIMVGKAVEHIFETEEGSKNEWRGMVLAQAPVMNTWFYITYEKDPVLYMYQLLDD 180 D +LA ++GKAVEH+FE E GSK+EWRGMVLAQAP+M WFYITYEKDPVLYMYQLLDD Sbjct: 121 DANLANTIIGKAVEHMFEGEHGSKDEWRGMVLAQAPIMKAWFYITYEKDPVLYMYQLLDD 180 Query: 181 YKDGDLRILQDSNDSPLAEREPGEVIDSLVGKQVEYAKDDGSKRTGMVIHQVEAKPSVYF 240 YK+GDLRI+ +S++SP EREPG V+D L+GK VEY K+DGSKR GMVIHQVEAKPSVYF Sbjct: 181 YKEGDLRIMPESSESPPTEREPGGVVDGLIGKHVEYTKEDGSKRIGMVIHQVEAKPSVYF 240 Query: 241 IKFDDDFHIYVYDLVKTS 258 IKFDDDFHIYVYDLVK S Sbjct: 241 IKFDDDFHIYVYDLVKKS 258 >gi|56682947 spindlin-like protein 2 [Homo sapiens] Length = 258 Score = 411 bits (1057), Expect = e-115 Identities = 192/258 (74%), Positives = 220/258 (85%) Query: 1 MKTPFGKAAAGQRSRTGAGHGSVSVTMIKRKAAHKKHRSRPTSQPRGNIVGCRIQHGWKD 60 MKTP + A GQ++R AG + S M K+K + KK R RP+SQPR NIVGCRI HGWK+ Sbjct: 1 MKTPNAQEAEGQQTRAAAGRATGSANMTKKKVSQKKQRGRPSSQPRRNIVGCRISHGWKE 60 Query: 61 GDEPLTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHRDERVSSLEVLPNRVASSRIS 120 GDEP+TQWKGTVLDQVP+NPSLYL+KYDG DCVYGLELHRDERV SL++L +RVASS IS Sbjct: 61 GDEPITQWKGTVLDQVPINPSLYLVKYDGIDCVYGLELHRDERVLSLKILSDRVASSHIS 120 Query: 121 DTHLAEIMVGKAVEHIFETEEGSKNEWRGMVLAQAPVMNTWFYITYEKDPVLYMYQLLDD 180 D +LA ++GKAVEH+FE E GSK+EWRGMVLAQAP+M WFYITYEKDPVLYMYQLLDD Sbjct: 121 DANLANTIIGKAVEHMFEGEHGSKDEWRGMVLAQAPIMKAWFYITYEKDPVLYMYQLLDD 180 Query: 181 YKDGDLRILQDSNDSPLAEREPGEVIDSLVGKQVEYAKDDGSKRTGMVIHQVEAKPSVYF 240 YK+GDLRI+ +S++SP EREPG V+D L+GK VEY K+DGSKR GMVIHQVEAKPSVYF Sbjct: 181 YKEGDLRIMPESSESPPTEREPGGVVDGLIGKHVEYTKEDGSKRIGMVIHQVEAKPSVYF 240 Query: 241 IKFDDDFHIYVYDLVKTS 258 IKFDDDFHIYVYDLVK S Sbjct: 241 IKFDDDFHIYVYDLVKKS 258 >gi|56682945 spindlin-like protein 2 [Homo sapiens] Length = 258 Score = 411 bits (1057), Expect = e-115 Identities = 192/258 (74%), Positives = 220/258 (85%) Query: 1 MKTPFGKAAAGQRSRTGAGHGSVSVTMIKRKAAHKKHRSRPTSQPRGNIVGCRIQHGWKD 60 MKTP + A GQ++R AG + S M K+K + KK R RP+SQPR NIVGCRI HGWK+ Sbjct: 1 MKTPNAQEAEGQQTRAAAGRATGSANMTKKKVSQKKQRGRPSSQPRRNIVGCRISHGWKE 60 Query: 61 GDEPLTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHRDERVSSLEVLPNRVASSRIS 120 GDEP+TQWKGTVLDQVP+NPSLYL+KYDG DCVYGLELHRDERV SL++L +RVASS IS Sbjct: 61 GDEPITQWKGTVLDQVPINPSLYLVKYDGIDCVYGLELHRDERVLSLKILSDRVASSHIS 120 Query: 121 DTHLAEIMVGKAVEHIFETEEGSKNEWRGMVLAQAPVMNTWFYITYEKDPVLYMYQLLDD 180 D +LA ++GKAVEH+FE E GSK+EWRGMVLAQAP+M WFYITYEKDPVLYMYQLLDD Sbjct: 121 DANLANTIIGKAVEHMFEGEHGSKDEWRGMVLAQAPIMKAWFYITYEKDPVLYMYQLLDD 180 Query: 181 YKDGDLRILQDSNDSPLAEREPGEVIDSLVGKQVEYAKDDGSKRTGMVIHQVEAKPSVYF 240 YK+GDLRI+ +S++SP EREPG V+D L+GK VEY K+DGSKR GMVIHQVEAKPSVYF Sbjct: 181 YKEGDLRIMPESSESPPTEREPGGVVDGLIGKHVEYTKEDGSKRIGMVIHQVEAKPSVYF 240 Query: 241 IKFDDDFHIYVYDLVKTS 258 IKFDDDFHIYVYDLVK S Sbjct: 241 IKFDDDFHIYVYDLVKKS 258 >gi|117606320 spindlin family, member 2 [Homo sapiens] Length = 258 Score = 410 bits (1053), Expect = e-115 Identities = 191/258 (74%), Positives = 219/258 (84%) Query: 1 MKTPFGKAAAGQRSRTGAGHGSVSVTMIKRKAAHKKHRSRPTSQPRGNIVGCRIQHGWKD 60 MKTP + A GQ++R AG + S M K+K + KK R RP+SQPR NIVGCRI HGWK+ Sbjct: 1 MKTPNAQEAEGQQTRAAAGRATGSANMTKKKVSQKKQRGRPSSQPRRNIVGCRISHGWKE 60 Query: 61 GDEPLTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHRDERVSSLEVLPNRVASSRIS 120 GDEP+TQWKGTVLDQVP+NPSLYL+KYDG DCVYGLELHRDERV SL++L +RVASS IS Sbjct: 61 GDEPITQWKGTVLDQVPINPSLYLVKYDGIDCVYGLELHRDERVLSLKILSDRVASSHIS 120 Query: 121 DTHLAEIMVGKAVEHIFETEEGSKNEWRGMVLAQAPVMNTWFYITYEKDPVLYMYQLLDD 180 D +LA ++GKAVEH+FE E GSK+EWRGMVLAQAP+M WFYITYEKDPVLYMYQLLDD Sbjct: 121 DANLANTIIGKAVEHMFEGEHGSKDEWRGMVLAQAPIMKAWFYITYEKDPVLYMYQLLDD 180 Query: 181 YKDGDLRILQDSNDSPLAEREPGEVIDSLVGKQVEYAKDDGSKRTGMVIHQVEAKPSVYF 240 YK+GDLRI+ +S++SP EREPG V+D L+GK VEY K+DGSKR GMVIHQVE KPSVYF Sbjct: 181 YKEGDLRIMPESSESPPTEREPGGVVDGLIGKHVEYTKEDGSKRIGMVIHQVETKPSVYF 240 Query: 241 IKFDDDFHIYVYDLVKTS 258 IKFDDDFHIYVYDLVK S Sbjct: 241 IKFDDDFHIYVYDLVKKS 258 >gi|108796661 spindlin family, member 4 [Homo sapiens] Length = 249 Score = 357 bits (915), Expect = 7e-99 Identities = 172/240 (71%), Positives = 203/240 (84%), Gaps = 2/240 (0%) Query: 19 GHGSVSVTMIKRKAAHKKHRSRPTSQPRGNIVGCRIQHGWKDGDEPLTQWKGTVLDQVPV 78 G VS ++K++ H+K R +PT R NIVGCRIQHGWK+G+EP+ QWKGTVL+QV V Sbjct: 10 GVDGVSAYLMKKRHTHRKQRRKPTFLTRRNIVGCRIQHGWKEGNEPVEQWKGTVLEQVSV 69 Query: 79 NPSLYLIKYDGFDCVYGLELHRDERVSSLEVLPNRVASSRISDTHLAEIMVGKAVEHIFE 138 P+LY+IKYDG D VYGLELHRD+RV +LE+LP RV + RI D+ LA+ ++GKAVEH+FE Sbjct: 70 KPTLYIIKYDGKDSVYGLELHRDKRVLALEILPERVPTPRI-DSRLADSLIGKAVEHVFE 128 Query: 139 TEEGSKNEWRGMVLAQAPVMNTWFYITYEKDPVLYMYQLLDDYKDGDLRILQDSN-DSPL 197 E G+K+EW+GMVLA+APVM+TWFYITYEKDPVLYMY LLDDYKDGDLRI+ DSN P Sbjct: 129 GEHGTKDEWKGMVLARAPVMDTWFYITYEKDPVLYMYTLLDDYKDGDLRIIPDSNYYFPT 188 Query: 198 AEREPGEVIDSLVGKQVEYAKDDGSKRTGMVIHQVEAKPSVYFIKFDDDFHIYVYDLVKT 257 AE+EPGEV+DSLVGKQVE+AKDDGSKRTG+ IHQV AKPSVYFIKFDDD HIYVY LVKT Sbjct: 189 AEQEPGEVVDSLVGKQVEHAKDDGSKRTGIFIHQVVAKPSVYFIKFDDDIHIYVYGLVKT 248 >gi|122937416 hypothetical protein LOC85452 [Homo sapiens] Length = 762 Score = 29.6 bits (65), Expect = 2.7 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 2 KTPFGKAAAGQRSRTGAGHGSVSVTMIKRKAAHKKHRSRPTSQPRGNIVGCRIQHGWKDG 61 K+ + KAA + G S M RK K + + QP G GC+ + GW G Sbjct: 681 KSLYDKAATSFSEQQLEGTESSQADMQSRKELEKLDKEQEEEQPAGE-PGCQAKPGWAGG 739 Query: 62 D 62 + Sbjct: 740 E 740 >gi|111955326 MLX interacting protein [Homo sapiens] Length = 919 Score = 29.3 bits (64), Expect = 3.6 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 130 GKAVEHIFETEEGSKNEWRGMVLAQAPVMNTWF--YITYEKDPVLYMYQLLDDYKDGD 185 GK V ++ +G K +WR + + W+ Y+ K+PV + LD D D Sbjct: 139 GKLVSPKWKNFKGLKLQWRDKIRLNNAIWRAWYMQYLEKRKNPVCHFVTPLDGSVDVD 196 >gi|239756714 PREDICTED: hypothetical protein XP_002345030 [Homo sapiens] Length = 119 Score = 28.9 bits (63), Expect = 4.6 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 10 AGQRSRTGAGHGSVSVTMIKRKAAHKKHRSRPTSQPRGNIVGCRIQHGWKDGDEPLTQW 68 AG+R+ AG G S + K + + + S GN+ G R+Q + G PL W Sbjct: 6 AGRRAGVSAGAGLTSSSACKHVPSPRNGATM--SSVTGNLSGIRVQRRIRPGLTPLRYW 62 >gi|239751209 PREDICTED: hypothetical protein XP_002347757 [Homo sapiens] Length = 119 Score = 28.9 bits (63), Expect = 4.6 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 10 AGQRSRTGAGHGSVSVTMIKRKAAHKKHRSRPTSQPRGNIVGCRIQHGWKDGDEPLTQW 68 AG+R+ AG G S + K + + + S GN+ G R+Q + G PL W Sbjct: 6 AGRRAGVSAGAGLTSSSACKHVPSPRNGATM--SSVTGNLSGIRVQRRIRPGLTPLRYW 62 >gi|239745699 PREDICTED: hypothetical protein XP_002343529 [Homo sapiens] Length = 119 Score = 28.9 bits (63), Expect = 4.6 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 10 AGQRSRTGAGHGSVSVTMIKRKAAHKKHRSRPTSQPRGNIVGCRIQHGWKDGDEPLTQW 68 AG+R+ AG G S + K + + + S GN+ G R+Q + G PL W Sbjct: 6 AGRRAGVSAGAGLTSSSACKHVPSPRNGATM--SSVTGNLSGIRVQRRIRPGLTPLRYW 62 >gi|45387955 hypothetical protein LOC125988 [Homo sapiens] Length = 118 Score = 28.9 bits (63), Expect = 4.6 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%) Query: 185 DLRILQDSNDSPLAEREPGEVIDSLVGKQVEYAKDDGSKRTGMVIHQVEAKPSVYF 240 D +L S+ S A ++ GEV+ + + +Y ++TG+ I Q+ A P +YF Sbjct: 27 DQELLGPSDKSQAALQKAGEVVPPAMYQFSQYV----CQQTGLQIPQLPAPPKIYF 78 >gi|37574618 hemogen [Homo sapiens] Length = 484 Score = 28.1 bits (61), Expect = 7.9 Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 13/153 (8%) Query: 30 RKAAHKKHRSRPTSQPRGNIVGCRIQHGWKDGDEPLTQWKGTVL--DQVPVNPSLYLIKY 87 ++AA K PTS+ ++ GC +Q + D P KG +L DQ P P Y Sbjct: 234 QEAAVPKILPCPTSEDTADLAGCSLQ-AYPKPDVP----KGYILDTDQNPAEPEEYNETD 288 Query: 88 DGFDCVYGLELHRDERVSSLEVLPNRVASSRISDTHLA-----EIMVGKAVEHIFETEEG 142 G GL + + ++ + L + +L EI+V KA H E Sbjct: 289 QGIAETEGL-FPKIQEIAEPKDLSTKTHQESAEPKYLPHKTCNEIIVPKAPSHKTIQETP 347 Query: 143 SKNEWRGMVLAQAPVMNTWFYITYEKDPVLYMY 175 ++ + + P + TY++ P L Y Sbjct: 348 HSEDYSIEINQETPGSEKYSPETYQEIPGLEEY 380 >gi|37574622 hemogen [Homo sapiens] Length = 484 Score = 28.1 bits (61), Expect = 7.9 Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 13/153 (8%) Query: 30 RKAAHKKHRSRPTSQPRGNIVGCRIQHGWKDGDEPLTQWKGTVL--DQVPVNPSLYLIKY 87 ++AA K PTS+ ++ GC +Q + D P KG +L DQ P P Y Sbjct: 234 QEAAVPKILPCPTSEDTADLAGCSLQ-AYPKPDVP----KGYILDTDQNPAEPEEYNETD 288 Query: 88 DGFDCVYGLELHRDERVSSLEVLPNRVASSRISDTHLA-----EIMVGKAVEHIFETEEG 142 G GL + + ++ + L + +L EI+V KA H E Sbjct: 289 QGIAETEGL-FPKIQEIAEPKDLSTKTHQESAEPKYLPHKTCNEIIVPKAPSHKTIQETP 347 Query: 143 SKNEWRGMVLAQAPVMNTWFYITYEKDPVLYMY 175 ++ + + P + TY++ P L Y Sbjct: 348 HSEDYSIEINQETPGSEKYSPETYQEIPGLEEY 380 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.317 0.135 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,201,694 Number of Sequences: 37866 Number of extensions: 456845 Number of successful extensions: 1014 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 962 Number of HSP's gapped (non-prelim): 15 length of query: 258 length of database: 18,247,518 effective HSP length: 100 effective length of query: 158 effective length of database: 14,460,918 effective search space: 2284825044 effective search space used: 2284825044 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.