Guide to the Human Genome
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Name: SPIN3 Sequence: fasta or formatted (258aa) NCBI GI: 115527078
Description:

spindlin family, member 3

Referenced in:

Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         14           3
 C cysteine            0.8          2           1
 D aspartate           8.1         21           3
 E glutamate           6.2         16           2
 F phenylalanine       2.7          7           1
 G glycine             7.8         20           1
 H histidine           3.5          9           1
 I isoleucine          5.0         13           1
 K lysine              7.4         19           2
 L leucine             7.0         18           2
 M methionine          2.7          7           1
 N asparagine          2.3          6           1
 P proline             4.7         12           1
 Q glutamine           3.9         10           1
 R arginine            5.8         15           1
 S serine              7.0         18           2
 T threonine           4.7         12           1
 V valine              8.9         23           1
 W tryptophan          1.6          4           1
 Y tyrosine            4.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   spindlin family, member 3 
SPIN1                 0.850   spindlin 
SPIN2B                0.764   spindlin-like protein 2 
SPIN2B                0.764   spindlin-like protein 2 
SPIN2B                0.764   spindlin-like protein 2 
SPIN2A                0.762   spindlin family, member 2 
SPIN4                 0.657   spindlin family, member 4 
KIAA1751              0.010   hypothetical protein LOC85452 
MLXIP                 0.008   MLX interacting protein 
LOC100292094          0.008   PREDICTED: hypothetical protein XP_002345030 
LOC100291221          0.008   PREDICTED: hypothetical protein XP_002347757 
LOC100287561          0.008   PREDICTED: hypothetical protein XP_002343529 
C19orf70              0.008   hypothetical protein LOC125988 
HEMGN                 0.006   hemogen 
HEMGN                 0.006   hemogen 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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