Guide to the Human Genome
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Name: SPIN2A Sequence: fasta or formatted (258aa) NCBI GI: 117606320
Description:

spindlin family, member 2

Referenced in:

Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         14           3
 C cysteine            0.8          2           1
 D aspartate           7.0         18           3
 E glutamate           7.4         19           1
 F phenylalanine       1.9          5           1
 G glycine             8.1         21           2
 H histidine           3.1          8           1
 I isoleucine          6.6         17           2
 K lysine              8.5         22           3
 L leucine             6.2         16           2
 M methionine          3.1          8           1
 N asparagine          2.3          6           1
 P proline             5.0         13           2
 Q glutamine           4.3         11           2
 R arginine            5.4         14           2
 S serine              7.0         18           2
 T threonine           4.3         11           1
 V valine              7.4         19           2
 W tryptophan          1.6          4           1
 Y tyrosine            4.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   spindlin family, member 2 
SPIN2B                0.996   spindlin-like protein 2 
SPIN2B                0.996   spindlin-like protein 2 
SPIN2B                0.996   spindlin-like protein 2 
SPIN1                 0.772   spindlin 
SPIN3                 0.764   spindlin family, member 3 
SPIN4                 0.625   spindlin family, member 4 
MLXIP                 0.016   MLX interacting protein 
ZNF777                0.012   zinc finger protein 777 
FGD5                  0.010   FYVE, RhoGEF and PH domain containing 5 
CHD1                  0.010   chromodomain helicase DNA binding protein 1 
TUT1                  0.008   terminal uridylyl transferase 1, U6 snRNA-specific ...
ATXN7                 0.006   ataxin 7 isoform b 
ATXN7                 0.006   ataxin 7 isoform a 
ATP2B1                0.006   plasma membrane calcium ATPase 1 isoform 1b 
SMURF2                0.006   SMAD specific E3 ubiquitin protein ligase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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