BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|222537730 secernin 2 isoform 2 [Homo sapiens] (378 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|222537730 secernin 2 isoform 2 [Homo sapiens] 768 0.0 gi|222537732 secernin 2 isoform 1 [Homo sapiens] 759 0.0 gi|38504671 secernin 3 [Homo sapiens] 428 e-120 gi|224465194 secernin 1 isoform a [Homo sapiens] 408 e-114 gi|224465190 secernin 1 isoform b [Homo sapiens] 408 e-114 gi|224465187 secernin 1 isoform a [Homo sapiens] 408 e-114 gi|224465192 secernin 1 isoform c [Homo sapiens] 338 4e-93 gi|148539855 epidermal growth factor receptor pathway substrate ... 31 2.1 gi|148539853 epidermal growth factor receptor pathway substrate ... 31 2.1 gi|239756495 PREDICTED: hypothetical protein [Homo sapiens] 30 2.7 gi|239743475 PREDICTED: hypothetical protein LOC100132396 [Homo ... 30 3.6 gi|9951920 paired box 5 [Homo sapiens] 30 4.7 gi|190343023 ATP-binding cassette, sub-family C, member 6 isofor... 29 6.1 gi|29789403 PDZ domain containing 8 [Homo sapiens] 29 6.1 >gi|222537730 secernin 2 isoform 2 [Homo sapiens] Length = 378 Score = 768 bits (1984), Expect = 0.0 Identities = 378/378 (100%), Positives = 378/378 (100%) Query: 1 MASSSPDSPCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCT 60 MASSSPDSPCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCT Sbjct: 1 MASSSPDSPCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCT 60 Query: 61 YIEVEQVSKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRL 120 YIEVEQVSKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRL Sbjct: 61 YIEVEQVSKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRL 120 Query: 121 ALERSSSAQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWA 180 ALERSSSAQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWA Sbjct: 121 ALERSSSAQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWA 180 Query: 181 AQRIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRME 240 AQRIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRME Sbjct: 181 AQRIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRME 240 Query: 241 AAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQP 300 AAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQP Sbjct: 241 AAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQP 300 Query: 301 CVHFLTATPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYR 360 CVHFLTATPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYR Sbjct: 301 CVHFLTATPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYR 360 Query: 361 GHQAALGLMERDQVSPRE 378 GHQAALGLMERDQVSPRE Sbjct: 361 GHQAALGLMERDQVSPRE 378 >gi|222537732 secernin 2 isoform 1 [Homo sapiens] Length = 425 Score = 759 bits (1959), Expect = 0.0 Identities = 373/373 (100%), Positives = 373/373 (100%) Query: 1 MASSSPDSPCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCT 60 MASSSPDSPCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCT Sbjct: 1 MASSSPDSPCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCT 60 Query: 61 YIEVEQVSKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRL 120 YIEVEQVSKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRL Sbjct: 61 YIEVEQVSKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRL 120 Query: 121 ALERSSSAQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWA 180 ALERSSSAQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWA Sbjct: 121 ALERSSSAQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWA 180 Query: 181 AQRIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRME 240 AQRIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRME Sbjct: 181 AQRIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRME 240 Query: 241 AAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQP 300 AAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQP Sbjct: 241 AAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQP 300 Query: 301 CVHFLTATPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYR 360 CVHFLTATPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYR Sbjct: 301 CVHFLTATPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYR 360 Query: 361 GHQAALGLMERDQ 373 GHQAALGLMERDQ Sbjct: 361 GHQAALGLMERDQ 373 >gi|38504671 secernin 3 [Homo sapiens] Length = 424 Score = 428 bits (1101), Expect = e-120 Identities = 214/366 (58%), Positives = 270/366 (73%), Gaps = 5/366 (1%) Query: 9 PCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTP-GSRLQCTYIEVEQV 67 P SCD FV++PPA+ +IF KNSDR DEVQEVV+ PA H G RL+CTYIE++QV Sbjct: 3 PFSCDTFVALPPATVDNRIIFGKNSDRLYDEVQEVVYFPAVVHDNLGERLKCTYIEIDQV 62 Query: 68 SKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSS 127 +T+AV+LSRP+WLWGAEMGANEHGVCIGNEAVW +E V + EALLGMDL+RL LER+ + Sbjct: 63 PETYAVVLSRPAWLWGAEMGANEHGVCIGNEAVWGREEVCDEEALLGMDLVRLGLERADT 122 Query: 128 AQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEG 187 A++AL+VI LLE YGQGGNC E FSYH++FL+ADR EAW+LETAG+ WAA+++QEG Sbjct: 123 AEKALNVIVDLLEKYGQGGNCTEGRMVFSYHNSFLIADRNEAWILETAGKYWAAEKVQEG 182 Query: 188 ARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQ 247 RNISNQLSI T I+ +HP++R +A+ KGWWDG+ FDFA +S +M + R+ Sbjct: 183 VRNISNQLSITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYSYL-DTAKMMTSSGRYC 241 Query: 248 AGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTA 307 G +LL + +G IT E MM ILRDK SGI M+ G F TTASMVS+LPQD + PC+HF T Sbjct: 242 EGYKLLNKHKGNITFETMMEILRDKPSGINME-GEFLTTASMVSILPQDSSLPCIHFFTG 300 Query: 308 TPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALG 367 TPDP RSVFKPFIF ++Q SPTF +D V+ F+ DRRH LY+ HQ AL Sbjct: 301 TPDPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHFKP--DRRHPLYQKHQQALE 358 Query: 368 LMERDQ 373 ++ ++ Sbjct: 359 VVNNNE 364 >gi|224465194 secernin 1 isoform a [Homo sapiens] Length = 414 Score = 408 bits (1049), Expect = e-114 Identities = 197/366 (53%), Positives = 262/366 (71%), Gaps = 8/366 (2%) Query: 14 CFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCTYIEVEQVSKTHAV 73 CFV+ PP + V+F KNS RPRDEVQEVV+ A H P S+++CTYI ++QV +T+A+ Sbjct: 9 CFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISIDQVPRTYAI 68 Query: 74 ILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSSAQEALH 133 ++SRP+WLWGAEMGANEHGVCI NEA+ T+EP E EALLGMDL+RL LER +A+EAL Sbjct: 69 MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 128 Query: 134 VITGLLEHYGQGGNCLEDA-APFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEGARNIS 192 VI LLE +GQGGN EDA + S+ S +L+ DR EAWVLET G+ WAA+++ EG R I Sbjct: 129 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 188 Query: 193 NQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQAGREL 252 +QLS+ T + A+HPELR++AQ++GWW G+G F+F+++FS + + AG++ Sbjct: 189 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDC-------GAGKDS 241 Query: 253 LRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTATPDPS 312 L +++ IT + MM LRDK SG+C+DS F TTAS VSVLPQ+ + PC+H+ T TPDPS Sbjct: 242 LEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPS 301 Query: 313 RSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALGLMERD 372 RS+FKPFIF V P+ SP FG DP + PRFQ + DRRH LY+ H+ A ++E D Sbjct: 302 RSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESD 361 Query: 373 QVSPRE 378 Q R+ Sbjct: 362 QEQGRK 367 >gi|224465190 secernin 1 isoform b [Homo sapiens] Length = 434 Score = 408 bits (1049), Expect = e-114 Identities = 197/366 (53%), Positives = 262/366 (71%), Gaps = 8/366 (2%) Query: 14 CFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCTYIEVEQVSKTHAV 73 CFV+ PP + V+F KNS RPRDEVQEVV+ A H P S+++CTYI ++QV +T+A+ Sbjct: 29 CFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISIDQVPRTYAI 88 Query: 74 ILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSSAQEALH 133 ++SRP+WLWGAEMGANEHGVCI NEA+ T+EP E EALLGMDL+RL LER +A+EAL Sbjct: 89 MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 148 Query: 134 VITGLLEHYGQGGNCLEDA-APFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEGARNIS 192 VI LLE +GQGGN EDA + S+ S +L+ DR EAWVLET G+ WAA+++ EG R I Sbjct: 149 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 208 Query: 193 NQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQAGREL 252 +QLS+ T + A+HPELR++AQ++GWW G+G F+F+++FS + + AG++ Sbjct: 209 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDC-------GAGKDS 261 Query: 253 LRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTATPDPS 312 L +++ IT + MM LRDK SG+C+DS F TTAS VSVLPQ+ + PC+H+ T TPDPS Sbjct: 262 LEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPS 321 Query: 313 RSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALGLMERD 372 RS+FKPFIF V P+ SP FG DP + PRFQ + DRRH LY+ H+ A ++E D Sbjct: 322 RSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESD 381 Query: 373 QVSPRE 378 Q R+ Sbjct: 382 QEQGRK 387 >gi|224465187 secernin 1 isoform a [Homo sapiens] Length = 414 Score = 408 bits (1049), Expect = e-114 Identities = 197/366 (53%), Positives = 262/366 (71%), Gaps = 8/366 (2%) Query: 14 CFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCTYIEVEQVSKTHAV 73 CFV+ PP + V+F KNS RPRDEVQEVV+ A H P S+++CTYI ++QV +T+A+ Sbjct: 9 CFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISIDQVPRTYAI 68 Query: 74 ILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSSAQEALH 133 ++SRP+WLWGAEMGANEHGVCI NEA+ T+EP E EALLGMDL+RL LER +A+EAL Sbjct: 69 MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 128 Query: 134 VITGLLEHYGQGGNCLEDA-APFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEGARNIS 192 VI LLE +GQGGN EDA + S+ S +L+ DR EAWVLET G+ WAA+++ EG R I Sbjct: 129 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 188 Query: 193 NQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQAGREL 252 +QLS+ T + A+HPELR++AQ++GWW G+G F+F+++FS + + AG++ Sbjct: 189 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDC-------GAGKDS 241 Query: 253 LRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTATPDPS 312 L +++ IT + MM LRDK SG+C+DS F TTAS VSVLPQ+ + PC+H+ T TPDPS Sbjct: 242 LEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPS 301 Query: 313 RSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALGLMERD 372 RS+FKPFIF V P+ SP FG DP + PRFQ + DRRH LY+ H+ A ++E D Sbjct: 302 RSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESD 361 Query: 373 QVSPRE 378 Q R+ Sbjct: 362 QEQGRK 367 >gi|224465192 secernin 1 isoform c [Homo sapiens] Length = 346 Score = 338 bits (868), Expect = 4e-93 Identities = 165/306 (53%), Positives = 218/306 (71%), Gaps = 8/306 (2%) Query: 74 ILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSSAQEALH 133 ++SRP+WLWGAEMGANEHGVCI NEA+ T+EP E EALLGMDL+RL LER +A+EAL Sbjct: 1 MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 60 Query: 134 VITGLLEHYGQGGNCLEDA-APFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEGARNIS 192 VI LLE +GQGGN EDA + S+ S +L+ DR EAWVLET G+ WAA+++ EG R I Sbjct: 61 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 120 Query: 193 NQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQAGREL 252 +QLS+ T + A+HPELR++AQ++GWW G+G F+F+++FS + + A G++ Sbjct: 121 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGA-------GKDS 173 Query: 253 LRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTATPDPS 312 L +++ IT + MM LRDK SG+C+DS F TTAS VSVLPQ+ + PC+H+ T TPDPS Sbjct: 174 LEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPS 233 Query: 313 RSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALGLMERD 372 RS+FKPFIF V P+ SP FG DP + PRFQ + DRRH LY+ H+ A ++E D Sbjct: 234 RSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESD 293 Query: 373 QVSPRE 378 Q R+ Sbjct: 294 QEQGRK 299 >gi|148539855 epidermal growth factor receptor pathway substrate 8-like protein 1 isoform b [Homo sapiens] Length = 596 Score = 30.8 bits (68), Expect = 2.1 Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 14/103 (13%) Query: 183 RIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQ----GAFDFAQIFSLTQQPVR 238 R G R QLS G+D S E+R QAKG+ G G AQ+FSL ++ +R Sbjct: 491 RAVPGPRAPEPQLSPGSDAS----EVRAWLQAKGFSSGTVDALGVLTGAQLFSLQKEELR 546 Query: 239 M----EAAKARFQ--AGRELLRQRQGGITAEVMMGILRDKESG 275 E A+ Q R LL ++ E +M + K G Sbjct: 547 AVSPEEGARVYSQVTVQRSLLEDKEKVSELEAVMEKQKKKVEG 589 >gi|148539853 epidermal growth factor receptor pathway substrate 8-like protein 1 isoform a [Homo sapiens] Length = 723 Score = 30.8 bits (68), Expect = 2.1 Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 14/103 (13%) Query: 183 RIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQ----GAFDFAQIFSLTQQPVR 238 R G R QLS G+D S E+R QAKG+ G G AQ+FSL ++ +R Sbjct: 618 RAVPGPRAPEPQLSPGSDAS----EVRAWLQAKGFSSGTVDALGVLTGAQLFSLQKEELR 673 Query: 239 M----EAAKARFQ--AGRELLRQRQGGITAEVMMGILRDKESG 275 E A+ Q R LL ++ E +M + K G Sbjct: 674 AVSPEEGARVYSQVTVQRSLLEDKEKVSELEAVMEKQKKKVEG 716 >gi|239756495 PREDICTED: hypothetical protein [Homo sapiens] Length = 1312 Score = 30.4 bits (67), Expect = 2.7 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 13/92 (14%) Query: 218 WDGQGAFDFAQIFSLTQQP---VRMEAAKARFQAGREL-LRQRQGGITAEVMMGILRDKE 273 W G +F Q F L +P + ++ + AG ++ + R G + + G+LR +E Sbjct: 1068 WPQGGQIEF-QDFGLRYRPELPLAVQGVSFKIHAGEKVGIVGRTGAGKSSLASGLLRLQE 1126 Query: 274 S--------GICMDSGGFRTTASMVSVLPQDP 297 + G+ + G T S +S++PQDP Sbjct: 1127 AAEGGIWIDGVPIAHVGLHTLRSRISIIPQDP 1158 >gi|239743475 PREDICTED: hypothetical protein LOC100132396 [Homo sapiens] Length = 300 Score = 30.0 bits (66), Expect = 3.6 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 10/115 (8%) Query: 190 NISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQAG 249 NIS+ +S+G IS + L+ + WW+G ++F Q P R A K + Sbjct: 39 NISHLVSLGYQISKSYIILQLEQGKELWWEG-------RVFLQDQNPDRESALKKKHMIS 91 Query: 250 RELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVS--VLPQDPTQPCV 302 + R+ T+ M L ++ DSG T +S ++ +L +PCV Sbjct: 92 MHPI-IRKDTSTSMTMENSLILEDPFEYNDSGEDCTHSSTITQCLLTHSGKKPCV 145 >gi|9951920 paired box 5 [Homo sapiens] Length = 391 Score = 29.6 bits (65), Expect = 4.7 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 17/131 (12%) Query: 17 SVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHT---PGSRLQCTYIEVEQVSKTHAV 73 +VP S+I +I K P V PA +H+ GS Q + + + ++++ Sbjct: 128 TVPSVSSINRIIRTKVQQPPNQPV------PASSHSIVSTGSVTQVSSVSTDSAGSSYSI 181 Query: 74 ILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSSAQEALH 133 S + G + + +E + + PV G +L G D LR + Q+ L Sbjct: 182 -----SGILGITSPSADTNKRKRDEGI-QESPVPNGHSLPGRDFLRKQMRGDLFTQQQLE 235 Query: 134 VITGLLE--HY 142 V+ + E HY Sbjct: 236 VLDRVFERQHY 246 >gi|190343023 ATP-binding cassette, sub-family C, member 6 isoform 1 [Homo sapiens] Length = 1503 Score = 29.3 bits (64), Expect = 6.1 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 13/92 (14%) Query: 218 WDGQGAFDFAQIFSLTQQP---VRMEAAKARFQAGREL-LRQRQGGITAEVMMGILRDKE 273 W G +F F L +P + ++ + AG ++ + R G + + G+LR +E Sbjct: 1259 WPQGGQIEFRD-FGLRYRPELPLAVQGVSFKIHAGEKVGIVGRTGAGKSSLASGLLRLQE 1317 Query: 274 S--------GICMDSGGFRTTASMVSVLPQDP 297 + G+ + G T S +S++PQDP Sbjct: 1318 AAEGGIWIDGVPIAHVGLHTLRSRISIIPQDP 1349 >gi|29789403 PDZ domain containing 8 [Homo sapiens] Length = 1154 Score = 29.3 bits (64), Expect = 6.1 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 3/83 (3%) Query: 227 AQIFSL-TQQPVRMEAAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRT 285 AQ F L +QP AR G ++ G + E + G RD+E GG Sbjct: 21 AQFFLLYRRQPEPPADEAARAGEGFRYIKPVPGLLLREYLYGGGRDEEPSGAAPEGGATP 80 Query: 286 TASMVSVLPQDPTQPCVHFLTAT 308 TA+ + P PT+ +FL AT Sbjct: 81 TAAPET--PAPPTRETCYFLNAT 101 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.133 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,973,859 Number of Sequences: 37866 Number of extensions: 674431 Number of successful extensions: 1355 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 1331 Number of HSP's gapped (non-prelim): 14 length of query: 378 length of database: 18,247,518 effective HSP length: 104 effective length of query: 274 effective length of database: 14,309,454 effective search space: 3920790396 effective search space used: 3920790396 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.