Guide to the Human Genome
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Search of human proteins with 222537730

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|222537730 secernin 2 isoform 2 [Homo sapiens]
         (378 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|222537730 secernin 2 isoform 2 [Homo sapiens]                      768   0.0  
gi|222537732 secernin 2 isoform 1 [Homo sapiens]                      759   0.0  
gi|38504671 secernin 3 [Homo sapiens]                                 428   e-120
gi|224465194 secernin 1 isoform a [Homo sapiens]                      408   e-114
gi|224465190 secernin 1 isoform b [Homo sapiens]                      408   e-114
gi|224465187 secernin 1 isoform a [Homo sapiens]                      408   e-114
gi|224465192 secernin 1 isoform c [Homo sapiens]                      338   4e-93
gi|148539855 epidermal growth factor receptor pathway substrate ...    31   2.1  
gi|148539853 epidermal growth factor receptor pathway substrate ...    31   2.1  
gi|239756495 PREDICTED: hypothetical protein [Homo sapiens]            30   2.7  
gi|239743475 PREDICTED: hypothetical protein LOC100132396 [Homo ...    30   3.6  
gi|9951920 paired box 5 [Homo sapiens]                                 30   4.7  
gi|190343023 ATP-binding cassette, sub-family C, member 6 isofor...    29   6.1  
gi|29789403 PDZ domain containing 8 [Homo sapiens]                     29   6.1  

>gi|222537730 secernin 2 isoform 2 [Homo sapiens]
          Length = 378

 Score =  768 bits (1984), Expect = 0.0
 Identities = 378/378 (100%), Positives = 378/378 (100%)

Query: 1   MASSSPDSPCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCT 60
           MASSSPDSPCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCT
Sbjct: 1   MASSSPDSPCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCT 60

Query: 61  YIEVEQVSKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRL 120
           YIEVEQVSKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRL
Sbjct: 61  YIEVEQVSKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRL 120

Query: 121 ALERSSSAQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWA 180
           ALERSSSAQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWA
Sbjct: 121 ALERSSSAQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWA 180

Query: 181 AQRIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRME 240
           AQRIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRME
Sbjct: 181 AQRIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRME 240

Query: 241 AAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQP 300
           AAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQP
Sbjct: 241 AAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQP 300

Query: 301 CVHFLTATPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYR 360
           CVHFLTATPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYR
Sbjct: 301 CVHFLTATPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYR 360

Query: 361 GHQAALGLMERDQVSPRE 378
           GHQAALGLMERDQVSPRE
Sbjct: 361 GHQAALGLMERDQVSPRE 378


>gi|222537732 secernin 2 isoform 1 [Homo sapiens]
          Length = 425

 Score =  759 bits (1959), Expect = 0.0
 Identities = 373/373 (100%), Positives = 373/373 (100%)

Query: 1   MASSSPDSPCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCT 60
           MASSSPDSPCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCT
Sbjct: 1   MASSSPDSPCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCT 60

Query: 61  YIEVEQVSKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRL 120
           YIEVEQVSKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRL
Sbjct: 61  YIEVEQVSKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRL 120

Query: 121 ALERSSSAQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWA 180
           ALERSSSAQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWA
Sbjct: 121 ALERSSSAQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWA 180

Query: 181 AQRIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRME 240
           AQRIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRME
Sbjct: 181 AQRIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRME 240

Query: 241 AAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQP 300
           AAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQP
Sbjct: 241 AAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQP 300

Query: 301 CVHFLTATPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYR 360
           CVHFLTATPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYR
Sbjct: 301 CVHFLTATPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYR 360

Query: 361 GHQAALGLMERDQ 373
           GHQAALGLMERDQ
Sbjct: 361 GHQAALGLMERDQ 373


>gi|38504671 secernin 3 [Homo sapiens]
          Length = 424

 Score =  428 bits (1101), Expect = e-120
 Identities = 214/366 (58%), Positives = 270/366 (73%), Gaps = 5/366 (1%)

Query: 9   PCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTP-GSRLQCTYIEVEQV 67
           P SCD FV++PPA+    +IF KNSDR  DEVQEVV+ PA  H   G RL+CTYIE++QV
Sbjct: 3   PFSCDTFVALPPATVDNRIIFGKNSDRLYDEVQEVVYFPAVVHDNLGERLKCTYIEIDQV 62

Query: 68  SKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSS 127
            +T+AV+LSRP+WLWGAEMGANEHGVCIGNEAVW +E V + EALLGMDL+RL LER+ +
Sbjct: 63  PETYAVVLSRPAWLWGAEMGANEHGVCIGNEAVWGREEVCDEEALLGMDLVRLGLERADT 122

Query: 128 AQEALHVITGLLEHYGQGGNCLEDAAPFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEG 187
           A++AL+VI  LLE YGQGGNC E    FSYH++FL+ADR EAW+LETAG+ WAA+++QEG
Sbjct: 123 AEKALNVIVDLLEKYGQGGNCTEGRMVFSYHNSFLIADRNEAWILETAGKYWAAEKVQEG 182

Query: 188 ARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQ 247
            RNISNQLSI T I+ +HP++R +A+ KGWWDG+  FDFA  +S      +M  +  R+ 
Sbjct: 183 VRNISNQLSITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYSYL-DTAKMMTSSGRYC 241

Query: 248 AGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTA 307
            G +LL + +G IT E MM ILRDK SGI M+ G F TTASMVS+LPQD + PC+HF T 
Sbjct: 242 EGYKLLNKHKGNITFETMMEILRDKPSGINME-GEFLTTASMVSILPQDSSLPCIHFFTG 300

Query: 308 TPDPSRSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALG 367
           TPDP RSVFKPFIF   ++Q     SPTF  +D V+    F+   DRRH LY+ HQ AL 
Sbjct: 301 TPDPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHFKP--DRRHPLYQKHQQALE 358

Query: 368 LMERDQ 373
           ++  ++
Sbjct: 359 VVNNNE 364


>gi|224465194 secernin 1 isoform a [Homo sapiens]
          Length = 414

 Score =  408 bits (1049), Expect = e-114
 Identities = 197/366 (53%), Positives = 262/366 (71%), Gaps = 8/366 (2%)

Query: 14  CFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCTYIEVEQVSKTHAV 73
           CFV+ PP +    V+F KNS RPRDEVQEVV+  A  H P S+++CTYI ++QV +T+A+
Sbjct: 9   CFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISIDQVPRTYAI 68

Query: 74  ILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSSAQEALH 133
           ++SRP+WLWGAEMGANEHGVCI NEA+ T+EP  E EALLGMDL+RL LER  +A+EAL 
Sbjct: 69  MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 128

Query: 134 VITGLLEHYGQGGNCLEDA-APFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEGARNIS 192
           VI  LLE +GQGGN  EDA +  S+ S +L+ DR EAWVLET G+ WAA+++ EG R I 
Sbjct: 129 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 188

Query: 193 NQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQAGREL 252
           +QLS+ T + A+HPELR++AQ++GWW G+G F+F+++FS  +  +          AG++ 
Sbjct: 189 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDC-------GAGKDS 241

Query: 253 LRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTATPDPS 312
           L +++  IT + MM  LRDK SG+C+DS  F TTAS VSVLPQ+ + PC+H+ T TPDPS
Sbjct: 242 LEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPS 301

Query: 313 RSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALGLMERD 372
           RS+FKPFIF   V   P+  SP FG  DP +  PRFQ + DRRH LY+ H+ A  ++E D
Sbjct: 302 RSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESD 361

Query: 373 QVSPRE 378
           Q   R+
Sbjct: 362 QEQGRK 367


>gi|224465190 secernin 1 isoform b [Homo sapiens]
          Length = 434

 Score =  408 bits (1049), Expect = e-114
 Identities = 197/366 (53%), Positives = 262/366 (71%), Gaps = 8/366 (2%)

Query: 14  CFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCTYIEVEQVSKTHAV 73
           CFV+ PP +    V+F KNS RPRDEVQEVV+  A  H P S+++CTYI ++QV +T+A+
Sbjct: 29  CFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISIDQVPRTYAI 88

Query: 74  ILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSSAQEALH 133
           ++SRP+WLWGAEMGANEHGVCI NEA+ T+EP  E EALLGMDL+RL LER  +A+EAL 
Sbjct: 89  MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 148

Query: 134 VITGLLEHYGQGGNCLEDA-APFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEGARNIS 192
           VI  LLE +GQGGN  EDA +  S+ S +L+ DR EAWVLET G+ WAA+++ EG R I 
Sbjct: 149 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 208

Query: 193 NQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQAGREL 252
           +QLS+ T + A+HPELR++AQ++GWW G+G F+F+++FS  +  +          AG++ 
Sbjct: 209 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDC-------GAGKDS 261

Query: 253 LRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTATPDPS 312
           L +++  IT + MM  LRDK SG+C+DS  F TTAS VSVLPQ+ + PC+H+ T TPDPS
Sbjct: 262 LEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPS 321

Query: 313 RSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALGLMERD 372
           RS+FKPFIF   V   P+  SP FG  DP +  PRFQ + DRRH LY+ H+ A  ++E D
Sbjct: 322 RSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESD 381

Query: 373 QVSPRE 378
           Q   R+
Sbjct: 382 QEQGRK 387


>gi|224465187 secernin 1 isoform a [Homo sapiens]
          Length = 414

 Score =  408 bits (1049), Expect = e-114
 Identities = 197/366 (53%), Positives = 262/366 (71%), Gaps = 8/366 (2%)

Query: 14  CFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCTYIEVEQVSKTHAV 73
           CFV+ PP +    V+F KNS RPRDEVQEVV+  A  H P S+++CTYI ++QV +T+A+
Sbjct: 9   CFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISIDQVPRTYAI 68

Query: 74  ILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSSAQEALH 133
           ++SRP+WLWGAEMGANEHGVCI NEA+ T+EP  E EALLGMDL+RL LER  +A+EAL 
Sbjct: 69  MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 128

Query: 134 VITGLLEHYGQGGNCLEDA-APFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEGARNIS 192
           VI  LLE +GQGGN  EDA +  S+ S +L+ DR EAWVLET G+ WAA+++ EG R I 
Sbjct: 129 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 188

Query: 193 NQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQAGREL 252
           +QLS+ T + A+HPELR++AQ++GWW G+G F+F+++FS  +  +          AG++ 
Sbjct: 189 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDC-------GAGKDS 241

Query: 253 LRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTATPDPS 312
           L +++  IT + MM  LRDK SG+C+DS  F TTAS VSVLPQ+ + PC+H+ T TPDPS
Sbjct: 242 LEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPS 301

Query: 313 RSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALGLMERD 372
           RS+FKPFIF   V   P+  SP FG  DP +  PRFQ + DRRH LY+ H+ A  ++E D
Sbjct: 302 RSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESD 361

Query: 373 QVSPRE 378
           Q   R+
Sbjct: 362 QEQGRK 367


>gi|224465192 secernin 1 isoform c [Homo sapiens]
          Length = 346

 Score =  338 bits (868), Expect = 4e-93
 Identities = 165/306 (53%), Positives = 218/306 (71%), Gaps = 8/306 (2%)

Query: 74  ILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSSAQEALH 133
           ++SRP+WLWGAEMGANEHGVCI NEA+ T+EP  E EALLGMDL+RL LER  +A+EAL 
Sbjct: 1   MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 60

Query: 134 VITGLLEHYGQGGNCLEDA-APFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEGARNIS 192
           VI  LLE +GQGGN  EDA +  S+ S +L+ DR EAWVLET G+ WAA+++ EG R I 
Sbjct: 61  VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 120

Query: 193 NQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQAGREL 252
           +QLS+ T + A+HPELR++AQ++GWW G+G F+F+++FS  +  +   A       G++ 
Sbjct: 121 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGA-------GKDS 173

Query: 253 LRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTATPDPS 312
           L +++  IT + MM  LRDK SG+C+DS  F TTAS VSVLPQ+ + PC+H+ T TPDPS
Sbjct: 174 LEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPS 233

Query: 313 RSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALGLMERD 372
           RS+FKPFIF   V   P+  SP FG  DP +  PRFQ + DRRH LY+ H+ A  ++E D
Sbjct: 234 RSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESD 293

Query: 373 QVSPRE 378
           Q   R+
Sbjct: 294 QEQGRK 299


>gi|148539855 epidermal growth factor receptor pathway substrate
           8-like protein 1 isoform b [Homo sapiens]
          Length = 596

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 14/103 (13%)

Query: 183 RIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQ----GAFDFAQIFSLTQQPVR 238
           R   G R    QLS G+D S    E+R   QAKG+  G     G    AQ+FSL ++ +R
Sbjct: 491 RAVPGPRAPEPQLSPGSDAS----EVRAWLQAKGFSSGTVDALGVLTGAQLFSLQKEELR 546

Query: 239 M----EAAKARFQ--AGRELLRQRQGGITAEVMMGILRDKESG 275
                E A+   Q    R LL  ++     E +M   + K  G
Sbjct: 547 AVSPEEGARVYSQVTVQRSLLEDKEKVSELEAVMEKQKKKVEG 589


>gi|148539853 epidermal growth factor receptor pathway substrate
           8-like protein 1 isoform a [Homo sapiens]
          Length = 723

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 14/103 (13%)

Query: 183 RIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWWDGQ----GAFDFAQIFSLTQQPVR 238
           R   G R    QLS G+D S    E+R   QAKG+  G     G    AQ+FSL ++ +R
Sbjct: 618 RAVPGPRAPEPQLSPGSDAS----EVRAWLQAKGFSSGTVDALGVLTGAQLFSLQKEELR 673

Query: 239 M----EAAKARFQ--AGRELLRQRQGGITAEVMMGILRDKESG 275
                E A+   Q    R LL  ++     E +M   + K  G
Sbjct: 674 AVSPEEGARVYSQVTVQRSLLEDKEKVSELEAVMEKQKKKVEG 716


>gi|239756495 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1312

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 13/92 (14%)

Query: 218  WDGQGAFDFAQIFSLTQQP---VRMEAAKARFQAGREL-LRQRQGGITAEVMMGILRDKE 273
            W   G  +F Q F L  +P   + ++    +  AG ++ +  R G   + +  G+LR +E
Sbjct: 1068 WPQGGQIEF-QDFGLRYRPELPLAVQGVSFKIHAGEKVGIVGRTGAGKSSLASGLLRLQE 1126

Query: 274  S--------GICMDSGGFRTTASMVSVLPQDP 297
            +        G+ +   G  T  S +S++PQDP
Sbjct: 1127 AAEGGIWIDGVPIAHVGLHTLRSRISIIPQDP 1158


>gi|239743475 PREDICTED: hypothetical protein LOC100132396 [Homo
           sapiens]
          Length = 300

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 10/115 (8%)

Query: 190 NISNQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQAG 249
           NIS+ +S+G  IS  +  L+     + WW+G       ++F   Q P R  A K +    
Sbjct: 39  NISHLVSLGYQISKSYIILQLEQGKELWWEG-------RVFLQDQNPDRESALKKKHMIS 91

Query: 250 RELLRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVS--VLPQDPTQPCV 302
              +  R+   T+  M   L  ++     DSG   T +S ++  +L     +PCV
Sbjct: 92  MHPI-IRKDTSTSMTMENSLILEDPFEYNDSGEDCTHSSTITQCLLTHSGKKPCV 145


>gi|9951920 paired box 5 [Homo sapiens]
          Length = 391

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 17/131 (12%)

Query: 17  SVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHT---PGSRLQCTYIEVEQVSKTHAV 73
           +VP  S+I  +I  K    P   V      PA +H+    GS  Q + +  +    ++++
Sbjct: 128 TVPSVSSINRIIRTKVQQPPNQPV------PASSHSIVSTGSVTQVSSVSTDSAGSSYSI 181

Query: 74  ILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSSAQEALH 133
                S + G    + +      +E +  + PV  G +L G D LR  +      Q+ L 
Sbjct: 182 -----SGILGITSPSADTNKRKRDEGI-QESPVPNGHSLPGRDFLRKQMRGDLFTQQQLE 235

Query: 134 VITGLLE--HY 142
           V+  + E  HY
Sbjct: 236 VLDRVFERQHY 246


>gi|190343023 ATP-binding cassette, sub-family C, member 6 isoform 1
            [Homo sapiens]
          Length = 1503

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 13/92 (14%)

Query: 218  WDGQGAFDFAQIFSLTQQP---VRMEAAKARFQAGREL-LRQRQGGITAEVMMGILRDKE 273
            W   G  +F   F L  +P   + ++    +  AG ++ +  R G   + +  G+LR +E
Sbjct: 1259 WPQGGQIEFRD-FGLRYRPELPLAVQGVSFKIHAGEKVGIVGRTGAGKSSLASGLLRLQE 1317

Query: 274  S--------GICMDSGGFRTTASMVSVLPQDP 297
            +        G+ +   G  T  S +S++PQDP
Sbjct: 1318 AAEGGIWIDGVPIAHVGLHTLRSRISIIPQDP 1349


>gi|29789403 PDZ domain containing 8 [Homo sapiens]
          Length = 1154

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 227 AQIFSL-TQQPVRMEAAKARFQAGRELLRQRQGGITAEVMMGILRDKESGICMDSGGFRT 285
           AQ F L  +QP       AR   G   ++   G +  E + G  RD+E       GG   
Sbjct: 21  AQFFLLYRRQPEPPADEAARAGEGFRYIKPVPGLLLREYLYGGGRDEEPSGAAPEGGATP 80

Query: 286 TASMVSVLPQDPTQPCVHFLTAT 308
           TA+  +  P  PT+   +FL AT
Sbjct: 81  TAAPET--PAPPTRETCYFLNAT 101


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,973,859
Number of Sequences: 37866
Number of extensions: 674431
Number of successful extensions: 1355
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1331
Number of HSP's gapped (non-prelim): 14
length of query: 378
length of database: 18,247,518
effective HSP length: 104
effective length of query: 274
effective length of database: 14,309,454
effective search space: 3920790396
effective search space used: 3920790396
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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