Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GAS6 Sequence: fasta or formatted (379aa) NCBI GI: 221316738
Description:

growth arrest-specific 6 isoform 3

Referenced in:

Additional Cell Cycle Functions
Coagulation
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [405aa] growth arrest-specific 6 isoform 2
alt prot [678aa] growth arrest-specific 6 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         32           3
 C cysteine            1.3          5           1
 D aspartate           5.3         20           1
 E glutamate           6.3         24           2
 F phenylalanine       4.0         15           1
 G glycine             7.1         27           2
 H histidine           2.9         11           1
 I isoleucine          3.4         13           1
 K lysine              2.9         11           2
 L leucine            11.3         43           2
 M methionine          2.1          8           1
 N asparagine          2.6         10           1
 P proline             5.3         20           2
 Q glutamine           3.4         13           1
 R arginine            7.1         27           2
 S serine              5.3         20           2
 T threonine           6.9         26           2
 V valine             10.6         40           2
 W tryptophan          1.6          6           1
 Y tyrosine            2.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   growth arrest-specific 6 isoform 3 
GAS6                  1.000   growth arrest-specific 6 isoform 2 
GAS6                  1.000   growth arrest-specific 6 isoform 1 precursor 
PROS1                 0.355   protein S, alpha preproprotein 
LOC732446             0.242   PREDICTED: similar to growth arrest-specific 6 [Hom...
SHBG                  0.091   sex hormone-binding globulin isoform 3 precursor [H...
SHBG                  0.091   sex hormone-binding globulin isoform 1 precursor [Hom...
SHBG                  0.082   sex hormone-binding globulin isoform 4 precursor [H...
LAMA1                 0.062   laminin, alpha 1 precursor 
SHBG                  0.056   sex hormone-binding globulin isoform 2 precursor [H...
LAMA2                 0.046   laminin alpha 2 subunit isoform b precursor 
LAMA2                 0.046   laminin alpha 2 subunit isoform a precursor 
LAMA5                 0.045   laminin alpha 5 
CNTNAP2               0.038   cell recognition molecule Caspr2 precursor 
AGRN                  0.024   agrin 
CNTNAP4               0.023   cell recognition protein CASPR4 isoform 1 
LOC389722             0.022   PREDICTED: hypothetical protein LOC389722 isoform 2...
LOC389722             0.022   PREDICTED: hypothetical protein LOC389722 isoform 1...
CNTNAP3               0.022   cell recognition molecule CASPR3 
CNTNAP4               0.022   cell recognition protein CASPR4 isoform 2 
HSPG2                 0.020   heparan sulfate proteoglycan 2 
CNTNAP1               0.019   contactin associated protein 1 precursor 
NRXN3                 0.019   neurexin 3 isoform 1 precursor 
CNTNAP5               0.018   contactin associated protein-like 5 
LAMA3                 0.018   laminin alpha 3 subunit isoform 1 
LAMA3                 0.018   laminin alpha 3 subunit isoform 4 
LAMA3                 0.018   laminin alpha 3 subunit isoform 3 
LAMA3                 0.018   laminin alpha 3 subunit isoform 2 
NRXN1                 0.018   neurexin 1 isoform alpha2 precursor 
NRXN1                 0.018   neurexin 1 isoform alpha1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press