Search of human proteins with 115298676

Search of human proteins with 115298676

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|115298676 hypothetical protein LOC160140 [Homo sapiens]
         (313 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|115298676 hypothetical protein LOC160140 [Homo sapiens]            655   0.0  
gi|22749497 hypothetical protein LOC254158 [Homo sapiens]              54   2e-07
gi|120953300 leucine-rich repeats and IQ motif containing 1 isof...    39   0.008
gi|34304381 inversin isoform a [Homo sapiens]                          31   1.6  
gi|34304379 inversin isoform b [Homo sapiens]                          31   1.6  
gi|42733592 hypothetical protein LOC399693 [Homo sapiens]              30   2.8  
gi|224451032 KIAA1683 isoform a [Homo sapiens]                         30   3.6  
gi|224451036 KIAA1683 isoform c [Homo sapiens]                         30   3.6  
gi|54606862 KIAA1683 isoform b [Homo sapiens]                          30   3.6  
gi|93204861 protein phosphatase 1, regulatory (inhibitor) subuni...    30   3.6  
gi|157426862 transmembrane channel-like 5 isoform b [Homo sapiens]     29   4.7  
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]         29   6.2  
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]         29   6.2  

>gi|115298676 hypothetical protein LOC160140 [Homo sapiens]
          Length = 313

 Score =  655 bits (1689), Expect = 0.0
 Identities = 313/313 (100%), Positives = 313/313 (100%)

Query: 1   MPWKEESEFTKQDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQGEPRQIVKYINPKEAE 60
           MPWKEESEFTKQDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQGEPRQIVKYINPKEAE
Sbjct: 1   MPWKEESEFTKQDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQGEPRQIVKYINPKEAE 60

Query: 61  LLDAAAGIHVRFRLGGVKFPPDIYYKIFTHRPIEDLCANSPRNYAKLPAKHTSHNKNDHL 120
           LLDAAAGIHVRFRLGGVKFPPDIYYKIFTHRPIEDLCANSPRNYAKLPAKHTSHNKNDHL
Sbjct: 61  LLDAAAGIHVRFRLGGVKFPPDIYYKIFTHRPIEDLCANSPRNYAKLPAKHTSHNKNDHL 120

Query: 121 QEEDHSGWYHRIENNGWRPVSDTFWLSTDGMVVEDKKESEFHFSKLKRRQDLEKKRKLRK 180
           QEEDHSGWYHRIENNGWRPVSDTFWLSTDGMVVEDKKESEFHFSKLKRRQDLEKKRKLRK
Sbjct: 121 QEEDHSGWYHRIENNGWRPVSDTFWLSTDGMVVEDKKESEFHFSKLKRRQDLEKKRKLRK 180

Query: 181 IEWMRQMYYSGSLEAKSTHHETLGLIHTATKGLIRAFEDGGIDSVMEWEVDEVLNWTNTL 240
           IEWMRQMYYSGSLEAKSTHHETLGLIHTATKGLIRAFEDGGIDSVMEWEVDEVLNWTNTL
Sbjct: 181 IEWMRQMYYSGSLEAKSTHHETLGLIHTATKGLIRAFEDGGIDSVMEWEVDEVLNWTNTL 240

Query: 241 NFDEYIASWKEIATSNSSANFKGFRFNQAQKNIYNYGGDISKMQMGIPDDTYYENVYQEP 300
           NFDEYIASWKEIATSNSSANFKGFRFNQAQKNIYNYGGDISKMQMGIPDDTYYENVYQEP
Sbjct: 241 NFDEYIASWKEIATSNSSANFKGFRFNQAQKNIYNYGGDISKMQMGIPDDTYYENVYQEP 300

Query: 301 NVTRLTPDSTYGL 313
           NVTRLTPDSTYGL
Sbjct: 301 NVTRLTPDSTYGL 313


>gi|22749497 hypothetical protein LOC254158 [Homo sapiens]
          Length = 332

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 12  QDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQGEPRQIVKYINPKEAELL-DAAAGIHV 70
           +D +A++IQ+AW S  N  IF+  K  I         +I+K + P EA+L+ D      +
Sbjct: 42  KDISAQIIQRAWLSHTNKMIFRLLKHAICAAEFYVTHEILKKVAPLEAKLIKDPTMQCKI 101

Query: 71  RFRLGGVKFPPDIYYKIFTH 90
           RFR  G  FPP I +KIF H
Sbjct: 102 RFRFRGETFPPFIVFKIFLH 121


>gi|120953300 leucine-rich repeats and IQ motif containing 1 isoform 1
            [Homo sapiens]
          Length = 1722

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 25/189 (13%)

Query: 11   KQDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQGEPRQIVKYINPKEAELLDAAAGIHV 70
            +++KAA +IQ  WK F+   + +   + ++  +  E  +  + I+  E  + D AA    
Sbjct: 1394 QREKAAILIQAVWKGFI---LRKKLTTALEAIKNEESDEEYREID-LEDFIFDEAALEEE 1449

Query: 71   RFRLGGVKFPPDI--------YYKIFTHRPIEDLCANSPRNYAKLPAKHTSHNKNDHLQE 122
               L   +FP           + KI  +   +D   N P N    PA+    N  ++L  
Sbjct: 1450 WLALDSTRFPSQTLLLSNQLHWPKIPGNLKWDDTSFNLPSN----PAQAWLCNDKENLSS 1505

Query: 123  EDHSGWYHRIEN--NGWRPVSDTFWLSTDGMVVEDKKESEFHF-------SKLKRRQDLE 173
             +H+ +  R EN  + W P S T   S      E K   E+ F         LKR Q ++
Sbjct: 1506 SEHTQFNSRSENKTSSWTPESKTSRKSLLKSEKEKKISEEWGFKDISTAQQMLKRAQKMK 1565

Query: 174  KKRKLRKIE 182
             K+  +KI+
Sbjct: 1566 SKKLKKKID 1574


>gi|34304381 inversin isoform a [Homo sapiens]
          Length = 1065

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 8/60 (13%)

Query: 9   FTKQDKAARVIQQAWKSF---LNVAIFQHFKSL----IDLRRQGEPRQIVKYINPKEAEL 61
           F K++KAA VIQ+AW+S+    +++  +H K L    +D  RQ E   ++  +  KE EL
Sbjct: 913 FRKKNKAAAVIQRAWRSYQLRKHLSHLRHMKQLGAGDVDRWRQ-ESTALLLQVWRKELEL 971


>gi|34304379 inversin isoform b [Homo sapiens]
          Length = 895

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 8/60 (13%)

Query: 9   FTKQDKAARVIQQAWKSF---LNVAIFQHFKSL----IDLRRQGEPRQIVKYINPKEAEL 61
           F K++KAA VIQ+AW+S+    +++  +H K L    +D  RQ E   ++  +  KE EL
Sbjct: 743 FRKKNKAAAVIQRAWRSYQLRKHLSHLRHMKQLGAGDVDRWRQ-ESTALLLQVWRKELEL 801


>gi|42733592 hypothetical protein LOC399693 [Homo sapiens]
          Length = 953

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)

Query: 38  LIDLRRQGEPRQIVKYINPKEAELLDAAAGIHVRFR 73
           L DL  +  PR +  Y++PKEAE L  ++ +H+R +
Sbjct: 785 LQDLTTRYLPRGMCIYLDPKEAEHLGTSSSLHLRHK 820


>gi|224451032 KIAA1683 isoform a [Homo sapiens]
          Length = 1367

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 8/58 (13%)

Query: 12  QDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQGE-------PRQIVKYINPKEAELL 62
           Q  AA+ IQ+AW+ F    I    KSL+   R  E       P+Q V++ +P+E  LL
Sbjct: 126 QMMAAKAIQEAWRRFNKRHILHSSKSLVKKTRAEEGDIPYHAPQQ-VRFQHPEENRLL 182


>gi|224451036 KIAA1683 isoform c [Homo sapiens]
          Length = 1134

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 8/58 (13%)

Query: 12  QDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQGE-------PRQIVKYINPKEAELL 62
           Q  AA+ IQ+AW+ F    I    KSL+   R  E       P+Q V++ +P+E  LL
Sbjct: 80  QMMAAKAIQEAWRRFNKRHILHSSKSLVKKTRAEEGDIPYHAPQQ-VRFQHPEENRLL 136


>gi|54606862 KIAA1683 isoform b [Homo sapiens]
          Length = 1180

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 8/58 (13%)

Query: 12  QDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQGE-------PRQIVKYINPKEAELL 62
           Q  AA+ IQ+AW+ F    I    KSL+   R  E       P+Q V++ +P+E  LL
Sbjct: 126 QMMAAKAIQEAWRRFNKRHILHSSKSLVKKTRAEEGDIPYHAPQQ-VRFQHPEENRLL 182


>gi|93204861 protein phosphatase 1, regulatory (inhibitor) subunit 9A
            [Homo sapiens]
          Length = 1098

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 9/26 (34%), Positives = 18/26 (69%)

Query: 224  SVMEWEVDEVLNWTNTLNFDEYIASW 249
            +V EW V +V +W  +LN ++Y++ +
Sbjct: 984  AVQEWSVQQVSHWLMSLNLEQYVSEF 1009


>gi|157426862 transmembrane channel-like 5 isoform b [Homo sapiens]
          Length = 948

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 20/81 (24%)

Query: 137 WRPVSDTFWLSTDG----------MVVEDKKESEFHFSKLKRRQDLEKK----------R 176
           WR ++  +W  T+G           ++ + K+  F   KL + QD+EKK          R
Sbjct: 857 WRIITYLYWQITEGRKIMIRLLHEQIINEGKDKMFLIEKLIKLQDMEKKANPSSLVLERR 916

Query: 177 KLRKIEWMRQMYYSGSLEAKS 197
           ++ +  ++    + GSL+ +S
Sbjct: 917 EVEQQGFLHLGEHDGSLDLRS 937


>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
          Length = 3907

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 139  PVSDTFWLSTDGMVVEDKKESEFHFSKLKRRQDLEKKRKLRKIEWMRQMYYSGSLEAKST 198
            P  +T +LS    +   +     H SKL   QDLEK +   +++ +  +  S   + K T
Sbjct: 1298 PKEETEFLSIHSQMTNLEDIDVNHKSKLSSLQDLEKTKLEEQVQELESLISSLQQQLKET 1357

Query: 199  HHETLGLIHTATKGLIRAFEDG-----GIDSVMEWEVD 231
                   IH   K L    E        +DSV+  E D
Sbjct: 1358 EQNYEAEIHCLQKRLQAVSESTVPPSLPVDSVVITESD 1395


>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
          Length = 3899

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 139  PVSDTFWLSTDGMVVEDKKESEFHFSKLKRRQDLEKKRKLRKIEWMRQMYYSGSLEAKST 198
            P  +T +LS    +   +     H SKL   QDLEK +   +++ +  +  S   + K T
Sbjct: 1298 PKEETEFLSIHSQMTNLEDIDVNHKSKLSSLQDLEKTKLEEQVQELESLISSLQQQLKET 1357

Query: 199  HHETLGLIHTATKGLIRAFEDG-----GIDSVMEWEVD 231
                   IH   K L    E        +DSV+  E D
Sbjct: 1358 EQNYEAEIHCLQKRLQAVSESTVPPSLPVDSVVITESD 1395


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,406,849
Number of Sequences: 37866
Number of extensions: 549340
Number of successful extensions: 1419
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1404
Number of HSP's gapped (non-prelim): 20
length of query: 313
length of database: 18,247,518
effective HSP length: 102
effective length of query: 211
effective length of database: 14,385,186
effective search space: 3035274246
effective search space used: 3035274246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.