Guide to the Human Genome
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Name: ZNF626 Sequence: fasta or formatted (92aa) NCBI GI: 21699082
Description:

zinc finger protein 626 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [528aa] zinc finger protein 626 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3          3           1
 C cysteine            2.2          2           1
 D aspartate           4.3          4           1
 E glutamate           7.6          7           2
 F phenylalanine       4.3          4           1
 G glycine             3.3          3           1
 H histidine           3.3          3           1
 I isoleucine          5.4          5           1
 K lysine              4.3          4           1
 L leucine            13.0         12           1
 M methionine          4.3          4           1
 N asparagine          5.4          5           1
 P proline             5.4          5           1
 Q glutamine           5.4          5           1
 R arginine            5.4          5           1
 S serine              8.7          8           1
 T threonine           4.3          4           1
 V valine              6.5          6           1
 W tryptophan          1.1          1           1
 Y tyrosine            2.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 626 isoform 2 
ZNF626                0.805   zinc finger protein 626 isoform 1 
LOC100128975          0.793   PREDICTED: similar to zinc finger protein 626 [Homo...
LOC100128975          0.793   PREDICTED: similar to zinc finger protein 626 [Homo...
LOC100128975          0.793   PREDICTED: similar to zinc finger protein 626 [Homo...
ZNF737                0.744   zinc finger protein 737 
ZNF737                0.744   PREDICTED: zinc finger protein 737 
ZNF737                0.744   PREDICTED: zinc finger protein 737 
ZNF737                0.744   PREDICTED: zinc finger protein 737 
ZNF253                0.726   zinc finger protein 253 
ZNF93                 0.720   zinc finger protein 93 
ZNF506                0.720   zinc finger protein 506 isoform 1 
ZNF66                 0.671   PREDICTED: zinc finger protein 66 
ZNF66                 0.671   PREDICTED: zinc finger protein 66 
ZNF66                 0.671   PREDICTED: zinc finger protein 66 
ZNF90                 0.665   zinc finger protein 90 
ZNF486                0.665   zinc finger protein 486 
ZNF257                0.665   zinc finger protein 257 
ZNF273                0.646   zinc finger protein 273 
ZNF85                 0.640   zinc finger protein 85 
LOC730110             0.640   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.640   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.640   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
ZNF680                0.634   zinc finger protein 680 isoform 1 
ZNF680                0.628   zinc finger protein 680 isoform 2 
ZNF429                0.604   zinc finger protein 429 
ZNF708                0.604   zinc finger protein 708 
ZNF98                 0.604   zinc finger protein 98 
ZNF681                0.604   zinc finger protein 681 
ZNF675                0.598   zinc finger protein 675 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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