Guide to the Human Genome
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Name: SLC25A39 Sequence: fasta or formatted (351aa) NCBI GI: 7706306
Description:

solute carrier family 25, member 39 isoform b

Referenced in:

Mitochondria
Solute Carrier Families

Other entries for this name:
alt prot [359aa] solute carrier family 25, member 39 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         35           2
 C cysteine            2.0          7           1
 D aspartate           3.4         12           1
 E glutamate           2.6          9           1
 F phenylalanine       4.6         16           2
 G glycine             8.0         28           2
 H histidine           0.9          3           1
 I isoleucine          2.8         10           2
 K lysine              3.4         12           1
 L leucine            12.3         43           3
 M methionine          3.4         12           1
 N asparagine          1.7          6           1
 P proline             5.4         19           1
 Q glutamine           4.3         15           2
 R arginine            6.6         23           2
 S serine              7.1         25           2
 T threonine           7.7         27           1
 V valine              8.3         29           2
 W tryptophan          2.8         10           1
 Y tyrosine            2.8         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 25, member 39 isoform b 
SLC25A39              0.982   solute carrier family 25, member 39 isoform a [Homo...
SLC25A40              0.472   mitochondrial carrier family protein 
SLC25A23              0.113   solute carrier family 25, member 23 
SLC25A28              0.111   solute carrier family 25, member 28 
SLC25A24              0.105   solute carrier family 25 member 24 isoform 1 
SLC25A41              0.105   solute carrier family 25, member 41 
SLC25A24              0.105   solute carrier family 25 member 24 isoform 2 
SLC25A20              0.105   carnitine/acylcarnitine translocase 
SLC25A13              0.105   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.105   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A37              0.104   solute carrier family 25, member 37 
SLC25A21              0.104   solute carrier family 25 (mitochondrial oxodicarboxy...
SLC25A38              0.101   solute carrier family 25, member 38 
SLC25A43              0.096   mitochondrial solute carrier protein 
LOC100292202          0.095   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.095   PREDICTED: similar to solute carrier family 25, mem...
SLC25A25              0.095   solute carrier family 25, member 25 isoform c 
SLC25A25              0.095   solute carrier family 25, member 25 isoform a 
SLC25A25              0.095   solute carrier family 25, member 25 isoform d 
SLC25A25              0.095   solute carrier family 25, member 25 isoform b 
SLC25A44              0.092   solute carrier family 25, member 44 isoform 1 
SLC25A36              0.089   solute carrier family 25, member 36 isoform a [Homo...
SLC25A12              0.085   solute carrier family 25, member 12 
SLC25A16              0.083   solute carrier family 25, member 16 
SLC25A36              0.082   solute carrier family 25, member 36 isoform b [Homo...
SLC25A33              0.080   mitochondrial carrier protein MGC4399 
UCP2                  0.079   uncoupling protein 2 
SLC25A19              0.079   solute carrier family 25, member 19 
SLC25A19              0.079   solute carrier family 25, member 19 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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