Guide to the Human Genome
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Name: DNAJC19 Sequence: fasta or formatted (116aa) NCBI GI: 21687102
Description:

DnaJ homolog, subfamily C, member 19

Referenced in:

Heat-Shock Proteins and Chaperonins
Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.8         16           3
 C cysteine            0.0          0           0
 D aspartate           2.6          3           1
 E glutamate           4.3          5           1
 F phenylalanine       3.4          4           1
 G glycine            10.3         12           2
 H histidine           2.6          3           1
 I isoleucine          5.2          6           1
 K lysine             10.3         12           2
 L leucine             7.8          9           2
 M methionine          4.3          5           1
 N asparagine          2.6          3           1
 P proline             5.2          6           1
 Q glutamine           4.3          5           1
 R arginine            5.2          6           2
 S serine              5.2          6           1
 T threonine           3.4          4           1
 V valine              6.0          7           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.4          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ homolog, subfamily C, member 19 
DNAJC15               0.551   DNAJ domain-containing 
DNAJB5                0.059   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.059   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.059   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJC24               0.054   zinc finger, CSL domain containing 3 
DNAJB9                0.049   DnaJ (Hsp40) homolog, subfamily B, member 9 
DNAJC10               0.044   DnaJ (Hsp40) homolog, subfamily C, member 10 
DNAJC16               0.039   DnaJ (Hsp40) homolog, subfamily C, member 16 
DNAJA4                0.039   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.039   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB13               0.039   testis spermatogenesis apoptosis-related protein 6 [...
DNAJC27               0.039   DnaJ (Hsp40) homolog, subfamily C, member 27 
DNAJA1                0.039   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJB4                0.039   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJC7                0.034   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.034   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJB12               0.034   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.034   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJC18               0.029   DnaJ (Hsp40) homolog, subfamily C, member 18 
SEC63                 0.029   SEC63-like protein 
DNAJC25-GNG10         0.029   DNAJC25-GNG10 protein 
DNAJC14               0.029   dopamine receptor interacting protein 
DNAJC25               0.029   DnaJ (Hsp40) homolog, subfamily C , member 25 [Homo...
DNAJB1                0.024   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJC11               0.024   DnaJ (Hsp40) homolog, subfamily C, member 11 
DNAJA2                0.024   DnaJ subfamily A member 2 
DNAJC1                0.020   DnaJ (Hsp40) homolog, subfamily C, member 1 
DNAJB14               0.020   DnaJ (Hsp40) homolog, subfamily B, member 14 isoform...
DNAJC3                0.020   DnaJ (Hsp40) homolog, subfamily C, member 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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