Guide to the Human Genome
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Search of human proteins with 216547920

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|216547920 solute carrier family 35, member B3 [Homo sapiens]
         (401 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|216547942 solute carrier family 35, member B3 [Homo sapiens]       790   0.0  
gi|216547920 solute carrier family 35, member B3 [Homo sapiens]       790   0.0  
gi|21361503 solute carrier family 35, member B3 [Homo sapiens]        790   0.0  
gi|5032213 solute carrier family 35, member B1 [Homo sapiens]         115   9e-26
gi|30026034 solute carrier family 35, member B2 [Homo sapiens]         78   1e-14
gi|14249528 solute carrier family 35, member B4 [Homo sapiens]         67   2e-11
gi|52627162 olfactory receptor, family 5, subfamily M, member 8 ...    30   3.9  
gi|27735127 solute carrier family 35, member F3 [Homo sapiens]         30   5.1  
gi|56912198 solute carrier family 35, member D3 [Homo sapiens]         29   6.6  
gi|118918429 NOD3 protein [Homo sapiens]                               29   6.6  
gi|4759114 solute carrier family 16, member 4 [Homo sapiens]           29   8.6  
gi|86792455 aquaporin 6 [Homo sapiens]                                 29   8.6  

>gi|216547942 solute carrier family 35, member B3 [Homo sapiens]
          Length = 401

 Score =  790 bits (2040), Expect = 0.0
 Identities = 401/401 (100%), Positives = 401/401 (100%)

Query: 1   MDLTQQAKDIQNITVQETNKNNSESIECSKITMDLKFNNSRKYISITVPSKTQTMSPHIK 60
           MDLTQQAKDIQNITVQETNKNNSESIECSKITMDLKFNNSRKYISITVPSKTQTMSPHIK
Sbjct: 1   MDLTQQAKDIQNITVQETNKNNSESIECSKITMDLKFNNSRKYISITVPSKTQTMSPHIK 60

Query: 61  SVDDVVVLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQF 120
           SVDDVVVLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQF
Sbjct: 61  SVDDVVVLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQF 120

Query: 121 AFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKL 180
           AFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKL
Sbjct: 121 AFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKL 180

Query: 181 IPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADA 240
           IPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADA
Sbjct: 181 IPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADA 240

Query: 241 VIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYA 300
           VIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYA
Sbjct: 241 VIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYA 300

Query: 301 FLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLV 360
           FLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLV
Sbjct: 301 FLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLV 360

Query: 361 VLGIFLNVYSKNMDKIRLPSLYDLINKSVEARKSRTLAQTV 401
           VLGIFLNVYSKNMDKIRLPSLYDLINKSVEARKSRTLAQTV
Sbjct: 361 VLGIFLNVYSKNMDKIRLPSLYDLINKSVEARKSRTLAQTV 401


>gi|216547920 solute carrier family 35, member B3 [Homo sapiens]
          Length = 401

 Score =  790 bits (2040), Expect = 0.0
 Identities = 401/401 (100%), Positives = 401/401 (100%)

Query: 1   MDLTQQAKDIQNITVQETNKNNSESIECSKITMDLKFNNSRKYISITVPSKTQTMSPHIK 60
           MDLTQQAKDIQNITVQETNKNNSESIECSKITMDLKFNNSRKYISITVPSKTQTMSPHIK
Sbjct: 1   MDLTQQAKDIQNITVQETNKNNSESIECSKITMDLKFNNSRKYISITVPSKTQTMSPHIK 60

Query: 61  SVDDVVVLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQF 120
           SVDDVVVLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQF
Sbjct: 61  SVDDVVVLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQF 120

Query: 121 AFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKL 180
           AFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKL
Sbjct: 121 AFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKL 180

Query: 181 IPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADA 240
           IPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADA
Sbjct: 181 IPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADA 240

Query: 241 VIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYA 300
           VIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYA
Sbjct: 241 VIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYA 300

Query: 301 FLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLV 360
           FLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLV
Sbjct: 301 FLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLV 360

Query: 361 VLGIFLNVYSKNMDKIRLPSLYDLINKSVEARKSRTLAQTV 401
           VLGIFLNVYSKNMDKIRLPSLYDLINKSVEARKSRTLAQTV
Sbjct: 361 VLGIFLNVYSKNMDKIRLPSLYDLINKSVEARKSRTLAQTV 401


>gi|21361503 solute carrier family 35, member B3 [Homo sapiens]
          Length = 401

 Score =  790 bits (2040), Expect = 0.0
 Identities = 401/401 (100%), Positives = 401/401 (100%)

Query: 1   MDLTQQAKDIQNITVQETNKNNSESIECSKITMDLKFNNSRKYISITVPSKTQTMSPHIK 60
           MDLTQQAKDIQNITVQETNKNNSESIECSKITMDLKFNNSRKYISITVPSKTQTMSPHIK
Sbjct: 1   MDLTQQAKDIQNITVQETNKNNSESIECSKITMDLKFNNSRKYISITVPSKTQTMSPHIK 60

Query: 61  SVDDVVVLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQF 120
           SVDDVVVLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQF
Sbjct: 61  SVDDVVVLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQF 120

Query: 121 AFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKL 180
           AFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKL
Sbjct: 121 AFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKL 180

Query: 181 IPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADA 240
           IPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADA
Sbjct: 181 IPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADA 240

Query: 241 VIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYA 300
           VIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYA
Sbjct: 241 VIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYA 300

Query: 301 FLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLV 360
           FLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLV
Sbjct: 301 FLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLV 360

Query: 361 VLGIFLNVYSKNMDKIRLPSLYDLINKSVEARKSRTLAQTV 401
           VLGIFLNVYSKNMDKIRLPSLYDLINKSVEARKSRTLAQTV
Sbjct: 361 VLGIFLNVYSKNMDKIRLPSLYDLINKSVEARKSRTLAQTV 401


>gi|5032213 solute carrier family 35, member B1 [Homo sapiens]
          Length = 322

 Score =  115 bits (287), Expect = 9e-26
 Identities = 93/297 (31%), Positives = 138/297 (46%), Gaps = 14/297 (4%)

Query: 83  ICVAGVFVFYLIYGYLQELIFSV---EGFK----SCGWYLTLVQFAFYSIFGLIELQLIQ 135
           +C  GVFV Y  YG LQE I      EG K    +    L  +Q    ++F  I +Q   
Sbjct: 16  LCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQCVINAVFAKILIQFFD 75

Query: 136 DKR-RRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQGKR 194
             R  R     Y   +   +G M  SN++L ++NYPTQV+ K CK IPVML GV +  K+
Sbjct: 76  TARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKK 135

Query: 195 YNVADVSAAICMSLGLIWFTLADSTTAPNFNLT---GVVLISLALCADAVIGNVQEKAMK 251
           Y +A     + +  G+  F             T   G +L+ L+L  D + G V +  M+
Sbjct: 136 YPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGYGELLLLLSLTLDGLTG-VSQDHMR 194

Query: 252 LHNASNSEMVLYSYSIGFVYIL-LGLTCTSGLGPAVTFCAKNPVRTYGYAFLFSLTGYFG 310
            H  + S  ++ + ++    +L +G+  T  L   ++F  + P   Y    LF LT   G
Sbjct: 195 AHYQTGSNHMMLNINLWSTLLLGMGILFTGELWEFLSFAERYPAIIYN-ILLFGLTSALG 253

Query: 311 ISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLVVLGIFLN 367
            SF+   +  FG L    +TT RK  TI+ S I FA P +       +LV LG+ L+
Sbjct: 254 QSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVLVFLGLGLD 310


>gi|30026034 solute carrier family 35, member B2 [Homo sapiens]
          Length = 432

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 16/311 (5%)

Query: 80  QFFICVAGVFVFYLIYGYLQELIFSV----------EGFKSCGWYLTLVQFAFYSIFGLI 129
           +   C  G+ V YL +G LQE + +           E F     +L L+      I   +
Sbjct: 111 KLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTD-SQFLVLMNRVLALIVAGL 169

Query: 130 ELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVF 189
              L +  R   P   Y   +   V +      +L ++++PTQV+ K  K+IPVML G  
Sbjct: 170 SCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMGKL 229

Query: 190 IQGKRYNVADVSAAICMSLGLIWFTLA---DSTTAPNFNLTGVVLISLALCADAVIGNVQ 246
           +  + Y   +   A  +S+G+  F L+   +  ++P   L+G++L++  +  D+   N Q
Sbjct: 230 VSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDSFTSNWQ 289

Query: 247 EKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYAFLFSLT 306
           + A+  +  S+ +M+        ++ +  L     L     F  ++      +A L S+ 
Sbjct: 290 D-ALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHS-EFAAHALLLSIC 347

Query: 307 GYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLVVLGIFL 366
              G  F+   I  FGA +   + T R+A  I+LS + +    T        +V   + L
Sbjct: 348 SACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLL 407

Query: 367 NVYSKNMDKIR 377
            VY++   K R
Sbjct: 408 RVYARGRLKQR 418


>gi|14249528 solute carrier family 35, member B4 [Homo sapiens]
          Length = 331

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 70/276 (25%), Positives = 118/276 (42%), Gaps = 28/276 (10%)

Query: 111 CGWYLTLVQFAFYSIFGLIELQLIQDKRRRIPGKTY--MIIAFLTVGTMGLSNTSLGYLN 168
           CG  +T  QF F ++ G +    +  K   IP + Y  M+  F TV  +     +L  + 
Sbjct: 31  CGNIVTFAQFLFIAVEGFLFEADLGRKPPAIPIRYYAIMVTMFFTVSVVNNYALNLN-IA 89

Query: 169 YPTQVIFKCCKLIPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTL-------ADSTTA 221
            P  +IF+   LI  M+ G+ I  KRY++   ++   +S+G+   T        + S+ +
Sbjct: 90  MPLHMIFRSGSLIANMILGIIILKKRYSIFKYTSIALVSVGIFICTFMSAKQVTSQSSLS 149

Query: 222 PNFN-------LTGVVLISLALCADAVIGNVQEKAMKLHNASNSEMVLYSYSI---GFVY 271
            N         L G+  ++ AL   A +G  QE   K     + E + Y++++   GFV+
Sbjct: 150 ENDGFQAFVWWLLGIGALTFALLMSARMGIFQETLYKRFGKHSKEALFYNHALPLPGFVF 209

Query: 272 ILLG------LTCTSGLGPAVTFCAKNPVRTYGYAFLFSLTGYFGISFVLALIKIFGALI 325
           +         L   S L          P+  + Y  +  +T Y  I  V  L     +L 
Sbjct: 210 LASDIYDHAVLFNKSELYEIPVIGVTLPIMWF-YLLMNIITQYVCIRGVFILTTECASLT 268

Query: 326 AVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLVV 361
              V T RK ++++ S ++F  PFT  + W G L V
Sbjct: 269 VTLVVTLRKFVSLIFSILYFQNPFTLWH-WLGTLFV 303


>gi|52627162 olfactory receptor, family 5, subfamily M, member 8
           [Homo sapiens]
          Length = 311

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 60  KSVDDVVVLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEG----FKSCGWYL 115
           K +   +V G NLS     + F IC++ +++F  I       I S EG    F +CG +L
Sbjct: 194 KELSMFIVAGWNLS----FSLFIICISYLYIFPAILK-----IRSTEGRQKAFSTCGSHL 244

Query: 116 TLVQFAFYSIF 126
           T V   + ++F
Sbjct: 245 TAVTIFYATLF 255


>gi|27735127 solute carrier family 35, member F3 [Homo sapiens]
          Length = 490

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 20/201 (9%)

Query: 173 VIFKCCKLIPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLI 232
           V+F C K    +L  + ++ +   V  V+A + ++ G++  T AD      F+   V+ I
Sbjct: 251 VLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIA-GIVMMTYAD-----GFHSHSVIGI 304

Query: 233 SLALCADAVIGNVQEKAMK--LHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCA 290
           +L + A A +  + +   K  L +A   E  L+   +G V+ +L +TC     P + +  
Sbjct: 305 ALVV-ASASMSALYKVLFKLLLGSAKFGEAALFLSILG-VFNILFITCI----PIILYFT 358

Query: 291 KNPV-RTYGYAFLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFA--K 347
           K     ++      +L G+  +     ++  FG  IAVT  T   ++ IVLS    A   
Sbjct: 359 KVEYWSSFDDIPWGNLCGFSVLLLTFNIVLNFG--IAVTYPT-LMSLGIVLSIPVNAVID 415

Query: 348 PFTFQYVWSGLLVVLGIFLNV 368
            +T Q V++G+ V+  I + +
Sbjct: 416 HYTSQIVFNGVRVIAIIIIGL 436


>gi|56912198 solute carrier family 35, member D3 [Homo sapiens]
          Length = 416

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)

Query: 144 KTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFK-CCKLIPVMLGGVFIQGKRYNVADVSA 202
           +++  +A L+     L+  SL  L+ P  V+FK C  L+ +++G + ++    +   ++A
Sbjct: 76  RSFAGVAVLSTLQSSLTLWSLRGLSLPMYVVFKRCLPLVTMLIGVLVLKNGAPSPGVLAA 135

Query: 203 AICMSLGLIWFTLADSTTAPNFNLTGVVLI 232
            +  + G       D T  P   +TGV+ +
Sbjct: 136 VLITTCGAALAGAGDLTGDPIGYVTGVLAV 165


>gi|118918429 NOD3 protein [Homo sapiens]
          Length = 1065

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)

Query: 197 VADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADAVIGNVQEKAMKLHN 254
           VA +  A+C +  L+  +L +++ +P     G   I+ ALCA++ + N+   A  LH+
Sbjct: 823 VAALMGALCTNQTLLSLSLRENSISPE----GAQAIAHALCANSTLKNLDLTANLLHD 876


>gi|4759114 solute carrier family 16, member 4 [Homo sapiens]
          Length = 487

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 21/157 (13%)

Query: 220 TAPNFNLTGVVLISLALCADAVIGNVQE-KAMKLHNASNSEMVLYSYSIGFVYILLGLTC 278
           T+      G ++ SL  CA  ++  + +    K  +   + +V   Y I      +   C
Sbjct: 55  TSEQIGWIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAFVVTGGYLISSWATSIPFLC 114

Query: 279 -TSGLGPAVTFCAKNPVRTYGYAFLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMT 337
            T GL P +           G AFL+ +         +   K F   +A++    R  M 
Sbjct: 115 VTMGLLPGL-----------GSAFLYQVAA-------VVTTKYFKKRLALSTAIARSGMG 156

Query: 338 IVLSFIFFAKPFTFQYVWSGLLVVLG-IFLNVYSKNM 373
           +      F K     Y W+G L++ G I LN+   +M
Sbjct: 157 LTFLLAPFTKFLIDLYDWTGALILFGAIALNLVPSSM 193


>gi|86792455 aquaporin 6 [Homo sapiens]
          Length = 282

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 5/56 (8%)

Query: 273 LLGLTCTSG--LGPAVTFCAKNPVRTYGYAFLFSLTGYFGISFVLALIKIFGALIA 326
           ++G++   G  +G   T C+ NP R++G A +    G F + +V  +  + GAL+A
Sbjct: 175 MIGISVALGHLIGIHFTGCSMNPARSFGPAIII---GKFTVHWVFWVGPLMGALLA 227


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.140    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,347,496
Number of Sequences: 37866
Number of extensions: 473919
Number of successful extensions: 1374
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1363
Number of HSP's gapped (non-prelim): 13
length of query: 401
length of database: 18,247,518
effective HSP length: 104
effective length of query: 297
effective length of database: 14,309,454
effective search space: 4249907838
effective search space used: 4249907838
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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