Guide to the Human Genome
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Name: BTF3L4 Sequence: fasta or formatted (100aa) NCBI GI: 211057406
Description:

basic transcription factor 3-like 4 isoform 2

Referenced in:

RNA Polymerase and General Transcription Factors
Translation Factors

Other entries for this name:
alt prot [158aa] basic transcription factor 3-like 4 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         10           1
 C cysteine            0.0          0           0
 D aspartate          11.0         11           3
 E glutamate           9.0          9           2
 F phenylalanine       4.0          4           1
 G glycine             4.0          4           1
 H histidine           2.0          2           1
 I isoleucine          6.0          6           1
 K lysine              7.0          7           1
 L leucine             9.0          9           1
 M methionine          2.0          2           1
 N asparagine          6.0          6           2
 P proline             7.0          7           1
 Q glutamine           4.0          4           1
 R arginine            2.0          2           1
 S serine              7.0          7           1
 T threonine           5.0          5           1
 V valine              5.0          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   basic transcription factor 3-like 4 isoform 2 [Homo... 
BTF3L4                1.000   basic transcription factor 3-like 4 isoform 1 
BTF3                  0.691   basic transcription factor 3 isoform B 
BTF3                  0.691   basic transcription factor 3 isoform A 
LOC654258             0.040   PREDICTED: similar to leucine rich repeat containin...
LRRC49                0.040   leucine rich repeat containing 49 
TOP2B                 0.029   DNA topoisomerase II, beta isozyme 
DZIP3                 0.029   DAZ interacting protein 3, zinc finger 
UBTF                  0.023   upstream binding transcription factor, RNA polymera...
UBTF                  0.023   upstream binding transcription factor, RNA polymera...
UBTF                  0.023   upstream binding transcription factor, RNA polymerase...
MLLT4                 0.017   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.017   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.017   myeloid/lymphoid or mixed-lineage leukemia (trithora...
STX8                  0.017   syntaxin 8 
RAD54L                0.017   RAD54-like protein 
RAD54L                0.017   RAD54-like protein 
RUNDC2B               0.017   RUN domain containing 2B 
SCHIP1                0.017   schwannomin interacting protein 1 
FCRL6                 0.017   Fc receptor-like 6 
LOC647055             0.011   PREDICTED: similar to hCG1790759 
LOC647055             0.011   PREDICTED: similar to hCG1790759 
LOC647055             0.011   PREDICTED: similar to hCG1790759 
MPP7                  0.011   palmitoylated membrane protein 7 
RUNDC2A               0.011   RUN domain containing 2A 
CYP17A1               0.011   cytochrome P450, family 17 
PAWR                  0.011   PRKC, apoptosis, WT1, regulator 
MAGI2                 0.011   membrane associated guanylate kinase, WW and PDZ dom...
WDR43                 0.011   WD repeat domain 43 
KRT3                  0.011   keratin 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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