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Search of human proteins with 21071039
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21071039 carnosinase 1 [Homo sapiens]
(507 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21071039 carnosinase 1 [Homo sapiens] 1014 0.0
gi|8922699 CNDP dipeptidase 2 [Homo sapiens] 526 e-149
gi|47458827 peptidase M20 domain containing 1 [Homo sapiens] 50 6e-06
gi|4501901 aminoacylase 1 [Homo sapiens] 43 8e-04
gi|19718759 myoferlin isoform b [Homo sapiens] 37 0.055
gi|7305053 myoferlin isoform a [Homo sapiens] 37 0.055
gi|18921093 transient receptor potential cation channel, subfami... 33 0.47
gi|154091314 transient receptor potential cation channel, subfam... 33 0.47
gi|154091312 transient receptor potential cation channel, subfam... 32 1.0
gi|154091308 transient receptor potential cation channel, subfam... 32 1.0
gi|154091310 transient receptor potential cation channel, subfam... 32 1.0
gi|55953096 transient receptor potential cation channel, subfami... 32 1.0
gi|45935368 transient receptor potential cation channel, subfami... 32 1.0
gi|154091320 transient receptor potential cation channel, subfam... 32 1.0
gi|154091318 transient receptor potential cation channel, subfam... 32 1.0
gi|154091316 transient receptor potential cation channel, subfam... 32 1.0
gi|224451124 neurobeachin-like 1 isoform 3 [Homo sapiens] 30 6.8
gi|154240744 neurobeachin-like 1 isoform 2 [Homo sapiens] 30 6.8
gi|149944613 neurobeachin-like 1 isoform 1 [Homo sapiens] 30 6.8
gi|94538366 transient receptor potential cation channel, subfami... 30 6.8
gi|60685227 SECIS binding protein 2-like [Homo sapiens] 29 8.8
>gi|21071039 carnosinase 1 [Homo sapiens]
Length = 507
Score = 1014 bits (2623), Expect = 0.0
Identities = 507/507 (100%), Positives = 507/507 (100%)
Query: 1 MDPKLGRMAASLLAVLLLLLERGMFSSPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIE 60
MDPKLGRMAASLLAVLLLLLERGMFSSPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIE
Sbjct: 1 MDPKLGRMAASLLAVLLLLLERGMFSSPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIE 60
Query: 61 SDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGS 120
SDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGS
Sbjct: 61 SDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGS 120
Query: 121 DPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAF 180
DPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAF
Sbjct: 121 DPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAF 180
Query: 181 RALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAIT 240
RALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAIT
Sbjct: 181 RALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAIT 240
Query: 241 YGTRGNSYFMVEVKCRDQDFHSGTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVV 300
YGTRGNSYFMVEVKCRDQDFHSGTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVV
Sbjct: 241 YGTRGNSYFMVEVKCRDQDFHSGTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVV 300
Query: 301 PLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPG 360
PLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPG
Sbjct: 301 PLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPG 360
Query: 361 TKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWIA 420
TKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWIA
Sbjct: 361 TKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWIA 420
Query: 421 NIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQ 480
NIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQ
Sbjct: 421 NIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQ 480
Query: 481 NEKINRWNYIEGTKLFAAFFLEMAQLH 507
NEKINRWNYIEGTKLFAAFFLEMAQLH
Sbjct: 481 NEKINRWNYIEGTKLFAAFFLEMAQLH 507
>gi|8922699 CNDP dipeptidase 2 [Homo sapiens]
Length = 475
Score = 526 bits (1354), Expect = e-149
Identities = 251/474 (52%), Positives = 336/474 (70%), Gaps = 2/474 (0%)
Query: 33 ALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARV 92
A L +F+YID +QD +++ L +WVAI+S V P R E+ RMM VAA +++LG V
Sbjct: 2 AALTTLFKYIDENQDRYIKKLAKWVAIQS--VSAWPEKRGEIRRMMEVAAADVKQLGGSV 59
Query: 93 ASVDMGPQQLPDGQSLPIPPVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLT 152
VD+G Q+LPDG +P+PP++L LGSDP K TVC YGHLDVQPA DGW ++P+ L
Sbjct: 60 ELVDIGKQKLPDGSEIPLPPILLGRLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLV 119
Query: 153 EVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEK 212
E DGKLYG G+TD+KGPV WINA+ A++ Q++PVN++F +EGMEE+GS L+EL+
Sbjct: 120 ERDGKLYGGGSTDDKGPVAGWINALEAYQKTGQEIPVNVRFCLEGMEESGSEGLDELIFA 179
Query: 213 EKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILHEP 272
KD FF VDY+ ISDN W+ ++KP ITYG RG YF +EV+C ++D HSG +GG +HE
Sbjct: 180 RKDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVECSNKDLHSGVYGGSVHEA 239
Query: 273 MADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFD 332
M DL+ L+GSLVD G+IL+PGI + V +TEEE Y I D+EE+ + L
Sbjct: 240 MTDLILLMGSLVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHS 299
Query: 333 TKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTR 392
K++ILMH WRYPSLS+HGIEGAF G KTVIP +V+GKFSIRLVP+M V +QVT
Sbjct: 300 HKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTS 359
Query: 393 HLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIP 452
+L F++ S N+ V M G PW+++ YLA +RA++TVFG EPD+ R+G +IP
Sbjct: 360 YLTKKFAELRSPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIP 419
Query: 453 IAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLEMAQL 506
+ FQE K+V+L+P+G+ DDG HSQNEK+NR+NYIEGTK+ AA+ E++QL
Sbjct: 420 VTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTKMLAAYLYEVSQL 473
>gi|47458827 peptidase M20 domain containing 1 [Homo sapiens]
Length = 502
Score = 49.7 bits (117), Expect = 6e-06
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 119 GSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVS 178
GSDP+ H DV PA +GW P+ E DG +YGRG D+K V+A + A+
Sbjct: 112 GSDPSLQPYLLMAHFDVVPAPE-EGWEVPPFSGLERDGVIYGRGTLDDKNSVMALLQALE 170
Query: 179 AFRALEQDLPVNIKFIIEGMEEAGS 203
+ + +P FI G +E S
Sbjct: 171 LL-LIRKYIPRRSFFISLGHDEESS 194
>gi|4501901 aminoacylase 1 [Homo sapiens]
Length = 408
Score = 42.7 bits (99), Expect = 8e-04
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 89 GARVASVDMGPQQLPDG-QSLPIPP----VILAELGSDPTKGTVCFYGHLDVQPADRGDG 143
GA VA + +QL G Q + + P +L G++PT ++ H DV P + +
Sbjct: 32 GAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFK-EH 90
Query: 144 WLTDPY-VLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAG 202
W DP+ + +G +Y RGA D K + ++ AV + P I EE G
Sbjct: 91 WSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVG 150
>gi|19718759 myoferlin isoform b [Homo sapiens]
Length = 2048
Score = 36.6 bits (83), Expect = 0.055
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 102 LPDGQSLPIPPVILAEL-GSDPTKGTVCFY--GHLDVQPADRGDGWLTDPYVLTEVDGKL 158
LPD S+P PP EL S P + TV Y L++QP D + L DPY+ + K+
Sbjct: 1516 LPDDPSVPAPPRQFRELPDSVPQECTVRIYIVRGLELQPQD--NNGLCDPYIKITLGKKV 1573
Query: 159 Y---GRGATDNKGPVLAWINAVSAFRALEQDLPVNI-KFIIEGMEEAGSVALEELVEKEK 214
+ PV + +S + E+DL +++ + +E + +L +
Sbjct: 1574 IEDRDHYIPNTLNPVFGRMYELSCYLPQEKDLKISVYDYDTFTRDEKVGETIIDLENRFL 1633
Query: 215 DRFFS--GV--DYIVISDNLWISQRKP 237
RF S G+ +Y V N W Q +P
Sbjct: 1634 SRFGSHCGIPEEYCVSGVNTWRDQLRP 1660
>gi|7305053 myoferlin isoform a [Homo sapiens]
Length = 2061
Score = 36.6 bits (83), Expect = 0.055
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 102 LPDGQSLPIPPVILAEL-GSDPTKGTVCFY--GHLDVQPADRGDGWLTDPYVLTEVDGKL 158
LPD S+P PP EL S P + TV Y L++QP D + L DPY+ + K+
Sbjct: 1529 LPDDPSVPAPPRQFRELPDSVPQECTVRIYIVRGLELQPQD--NNGLCDPYIKITLGKKV 1586
Query: 159 Y---GRGATDNKGPVLAWINAVSAFRALEQDLPVNI-KFIIEGMEEAGSVALEELVEKEK 214
+ PV + +S + E+DL +++ + +E + +L +
Sbjct: 1587 IEDRDHYIPNTLNPVFGRMYELSCYLPQEKDLKISVYDYDTFTRDEKVGETIIDLENRFL 1646
Query: 215 DRFFS--GV--DYIVISDNLWISQRKP 237
RF S G+ +Y V N W Q +P
Sbjct: 1647 SRFGSHCGIPEEYCVSGVNTWRDQLRP 1673
>gi|18921093 transient receptor potential cation channel, subfamily
M, member 6 [Homo sapiens]
Length = 2022
Score = 33.5 bits (75), Expect = 0.47
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 303 TEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHL----WR--YPSL--SIHGIEG 354
T+ +T+ I+ E+ + ++ + +DTK + L+HL W+ P L S+HG
Sbjct: 88 TKSPTDTFGTINFQDGEHTHHAKYIRTSYDTKLDHLLHLMLKEWKMELPKLVISVHGGIQ 147
Query: 355 AFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLG 414
F P I + + K + + + V++H+ D K +SS+ + T+G
Sbjct: 148 NFTMPSKFKEIFSQGLVKAAETTGAWIITEGINTGVSKHVGDAL-KSHSSHSLRKIWTVG 206
Query: 415 LHPW 418
+ PW
Sbjct: 207 IPPW 210
>gi|154091314 transient receptor potential cation channel, subfamily
M, member 3 isoform k [Homo sapiens]
Length = 1707
Score = 33.5 bits (75), Expect = 0.47
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 320 YRNSSRVEKFLFDTKEEILMHL----WR--YPSL--SIHGIEGAFD-EPGTKTVIPGRVI 370
+ N + + FDTK ++L+HL W+ P L S+HG F+ +P K V G+ +
Sbjct: 149 HSNKAMYVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVF-GKGL 207
Query: 371 GKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPW 418
K ++ + V V RH+ D S ++ + T+G+ PW
Sbjct: 208 IKAAMTTGAWIFTGGVNTGVIRHVGDALKDHASKSRGKI-CTIGIAPW 254
>gi|154091312 transient receptor potential cation channel, subfamily
M, member 3 isoform b [Homo sapiens]
Length = 1566
Score = 32.3 bits (72), Expect = 1.0
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 331 FDTKEEILMHL----WR--YPSL--SIHGIEGAFD-EPGTKTVIPGRVIGKFSIRLVPHM 381
FDTK ++L+HL W+ P L S+HG F+ +P K V G+ + K ++ +
Sbjct: 7 FDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVF-GKGLIKAAMTTGAWI 65
Query: 382 NVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPW 418
V V RH+ D S ++ + T+G+ PW
Sbjct: 66 FTGGVNTGVIRHVGDALKDHASKSRGKI-CTIGIAPW 101
>gi|154091308 transient receptor potential cation channel, subfamily
M, member 3 isoform f [Homo sapiens]
Length = 1579
Score = 32.3 bits (72), Expect = 1.0
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 331 FDTKEEILMHL----WR--YPSL--SIHGIEGAFD-EPGTKTVIPGRVIGKFSIRLVPHM 381
FDTK ++L+HL W+ P L S+HG F+ +P K V G+ + K ++ +
Sbjct: 7 FDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVF-GKGLIKAAMTTGAWI 65
Query: 382 NVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPW 418
V V RH+ D S ++ + T+G+ PW
Sbjct: 66 FTGGVNTGVIRHVGDALKDHASKSRGKI-CTIGIAPW 101
>gi|154091310 transient receptor potential cation channel, subfamily
M, member 3 isoform g [Homo sapiens]
Length = 1569
Score = 32.3 bits (72), Expect = 1.0
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 331 FDTKEEILMHL----WR--YPSL--SIHGIEGAFD-EPGTKTVIPGRVIGKFSIRLVPHM 381
FDTK ++L+HL W+ P L S+HG F+ +P K V G+ + K ++ +
Sbjct: 7 FDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVF-GKGLIKAAMTTGAWI 65
Query: 382 NVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPW 418
V V RH+ D S ++ + T+G+ PW
Sbjct: 66 FTGGVNTGVIRHVGDALKDHASKSRGKI-CTIGIAPW 101
>gi|55953096 transient receptor potential cation channel, subfamily
M, member 3 isoform c [Homo sapiens]
Length = 255
Score = 32.3 bits (72), Expect = 1.0
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 331 FDTKEEILMHL----WR--YPSL--SIHGIEGAFD-EPGTKTVIPGRVIGKFSIRLVPHM 381
FDTK ++L+HL W+ P L S+HG F+ +P K V G+ + K ++ +
Sbjct: 7 FDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVF-GKGLIKAAMTTGAWI 65
Query: 382 NVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPW 418
V V RH+ D S ++ + T+G+ PW
Sbjct: 66 FTGGVNTGVIRHVGDALKDHASKSRGKI-CTIGIAPW 101
>gi|45935368 transient receptor potential cation channel, subfamily
M, member 3 isoform h [Homo sapiens]
Length = 230
Score = 32.3 bits (72), Expect = 1.0
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 331 FDTKEEILMHL----WR--YPSL--SIHGIEGAFD-EPGTKTVIPGRVIGKFSIRLVPHM 381
FDTK ++L+HL W+ P L S+HG F+ +P K V G+ + K ++ +
Sbjct: 7 FDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVF-GKGLIKAAMTTGAWI 65
Query: 382 NVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPW 418
V V RH+ D S ++ + T+G+ PW
Sbjct: 66 FTGGVNTGVIRHVGDALKDHASKSRGKI-CTIGIAPW 101
>gi|154091320 transient receptor potential cation channel, subfamily
M, member 3 isoform a [Homo sapiens]
Length = 1554
Score = 32.3 bits (72), Expect = 1.0
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 331 FDTKEEILMHL----WR--YPSL--SIHGIEGAFD-EPGTKTVIPGRVIGKFSIRLVPHM 381
FDTK ++L+HL W+ P L S+HG F+ +P K V G+ + K ++ +
Sbjct: 7 FDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVF-GKGLIKAAMTTGAWI 65
Query: 382 NVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPW 418
V V RH+ D S ++ + T+G+ PW
Sbjct: 66 FTGGVNTGVIRHVGDALKDHASKSRGKI-CTIGIAPW 101
>gi|154091318 transient receptor potential cation channel, subfamily
M, member 3 isoform d [Homo sapiens]
Length = 1544
Score = 32.3 bits (72), Expect = 1.0
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 331 FDTKEEILMHL----WR--YPSL--SIHGIEGAFD-EPGTKTVIPGRVIGKFSIRLVPHM 381
FDTK ++L+HL W+ P L S+HG F+ +P K V G+ + K ++ +
Sbjct: 7 FDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVF-GKGLIKAAMTTGAWI 65
Query: 382 NVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPW 418
V V RH+ D S ++ + T+G+ PW
Sbjct: 66 FTGGVNTGVIRHVGDALKDHASKSRGKI-CTIGIAPW 101
>gi|154091316 transient receptor potential cation channel, subfamily
M, member 3 isoform e [Homo sapiens]
Length = 1556
Score = 32.3 bits (72), Expect = 1.0
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 331 FDTKEEILMHL----WR--YPSL--SIHGIEGAFD-EPGTKTVIPGRVIGKFSIRLVPHM 381
FDTK ++L+HL W+ P L S+HG F+ +P K V G+ + K ++ +
Sbjct: 7 FDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVF-GKGLIKAAMTTGAWI 65
Query: 382 NVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPW 418
V V RH+ D S ++ + T+G+ PW
Sbjct: 66 FTGGVNTGVIRHVGDALKDHASKSRGKI-CTIGIAPW 101
>gi|224451124 neurobeachin-like 1 isoform 3 [Homo sapiens]
Length = 2694
Score = 29.6 bits (65), Expect = 6.8
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 20 LERGMFSSPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMA 79
+ERG S P + ++ + D + +Q + EW E+ + P + FR++
Sbjct: 1465 IERGQVFSALSKPGISSELLRPSDEIKLTLLQKMLEWAISENREAKTNPVTAENAFRLVL 1524
Query: 80 VAADTLQRLG 89
+ D LQ G
Sbjct: 1525 IIQDFLQSEG 1534
>gi|154240744 neurobeachin-like 1 isoform 2 [Homo sapiens]
Length = 1335
Score = 29.6 bits (65), Expect = 6.8
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 20 LERGMFSSPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMA 79
+ERG S P + ++ + D + +Q + EW E+ + P + FR++
Sbjct: 175 IERGQVFSALSKPGISSELLRPSDEIKLTLLQKMLEWAISENREAKTNPVTAENAFRLVL 234
Query: 80 VAADTLQRLG 89
+ D LQ G
Sbjct: 235 IIQDFLQSEG 244
>gi|149944613 neurobeachin-like 1 isoform 1 [Homo sapiens]
Length = 1404
Score = 29.6 bits (65), Expect = 6.8
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 20 LERGMFSSPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMA 79
+ERG S P + ++ + D + +Q + EW E+ + P + FR++
Sbjct: 175 IERGQVFSALSKPGISSELLRPSDEIKLTLLQKMLEWAISENREAKTNPVTAENAFRLVL 234
Query: 80 VAADTLQRLG 89
+ D LQ G
Sbjct: 235 IIQDFLQSEG 244
>gi|94538366 transient receptor potential cation channel, subfamily
M, member 1 [Homo sapiens]
Length = 1603
Score = 29.6 bits (65), Expect = 6.8
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Query: 308 NTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHL----WR--YPSL--SIHGIEGAFD-E 358
++Y + Y N + + +DTK + L+HL W+ P L S+HG F+ +
Sbjct: 54 DSYGVLEFQGGGYSNKAMYIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNFEMQ 113
Query: 359 PGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPW 418
P K V G+ + K ++ + V V H+ D +S ++ V +G+ PW
Sbjct: 114 PKLKQVF-GKGLIKAAMTTGAWIFTGGVSTGVISHVGDALKDHSSKSRGRV-CAIGIAPW 171
>gi|60685227 SECIS binding protein 2-like [Homo sapiens]
Length = 1056
Score = 29.3 bits (64), Expect = 8.8
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 279 LLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTK 334
LL S + S+ LVPG+ +E EEE Y + +E N SR+E ++ +T+
Sbjct: 926 LLNSSITSTTSTLVPGMLEEEEDEDEEEEEDYTHEPISVEVQLN-SRIESWVSETQ 980
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,409,169
Number of Sequences: 37866
Number of extensions: 879394
Number of successful extensions: 1863
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1852
Number of HSP's gapped (non-prelim): 25
length of query: 507
length of database: 18,247,518
effective HSP length: 107
effective length of query: 400
effective length of database: 14,195,856
effective search space: 5678342400
effective search space used: 5678342400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.