Search of human proteins with 209571542

Search of human proteins with 209571542

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|209571542 connexin 43-interacting protein 150 isoform b
[Homo sapiens]
         (1086 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|209571542 connexin 43-interacting protein 150 isoform b [Homo...  2204   0.0  
gi|75832029 connexin 43-interacting protein 150 isoform a [Homo ...  2151   0.0  
gi|14195601 protein phosphatase 1, regulatory (inhibitor) subuni...    38   0.059
gi|4505319 protein phosphatase 1, regulatory (inhibitor) subunit...    38   0.059
gi|31077211 hypoxia-inducible factor 1, alpha subunit isoform 2 ...    35   0.50 
gi|4504385 hypoxia-inducible factor 1, alpha subunit isoform 1 [...    35   0.50 
gi|157952215 protein tyrosine phosphatase, receptor type, B isof...    32   3.3  
gi|157952213 protein tyrosine phosphatase, receptor type, B isof...    32   3.3  
gi|21536371 telomerase-associated protein 1 [Homo sapiens]             32   4.3  
gi|134133292 WD repeat domain 27 [Homo sapiens]                        32   4.3  
gi|55743108 ATG16 autophagy related 16-like 2 [Homo sapiens]           31   7.3  
gi|134254450 patched isoform S [Homo sapiens]                          30   9.5  
gi|134254435 patched isoform S [Homo sapiens]                          30   9.5  
gi|134254468 patched isoform S [Homo sapiens]                          30   9.5  
gi|134254452 patched isoform S [Homo sapiens]                          30   9.5  
gi|134254432 patched isoform L' [Homo sapiens]                         30   9.5  
gi|134254466 patched isoform M [Homo sapiens]                          30   9.5  
gi|134254446 patched isoform L [Homo sapiens]                          30   9.5  
gi|23821044 zinc finger/RING finger 2 [Homo sapiens]                   30   9.5  

>gi|209571542 connexin 43-interacting protein 150 isoform b [Homo
            sapiens]
          Length = 1086

 Score = 2204 bits (5711), Expect = 0.0
 Identities = 1086/1086 (100%), Positives = 1086/1086 (100%)

Query: 1    MIAVSTANGYILFFHITSTRGDKYLYEPVYPKGSPQMKGTPHFKEEQCAPALNLEMRKIL 60
            MIAVSTANGYILFFHITSTRGDKYLYEPVYPKGSPQMKGTPHFKEEQCAPALNLEMRKIL
Sbjct: 1    MIAVSTANGYILFFHITSTRGDKYLYEPVYPKGSPQMKGTPHFKEEQCAPALNLEMRKIL 60

Query: 61   DLQAPIMSLQSVLEDLLVATSDGLLHLIHWEGMTNGRKAINLCTVPFSVDLQSSRVGSFL 120
            DLQAPIMSLQSVLEDLLVATSDGLLHLIHWEGMTNGRKAINLCTVPFSVDLQSSRVGSFL
Sbjct: 61   DLQAPIMSLQSVLEDLLVATSDGLLHLIHWEGMTNGRKAINLCTVPFSVDLQSSRVGSFL 120

Query: 121  GFTDVHIRDMEYCATLDGFAVVFNDGKVGFITPVSSRFTAEQLHGVWPQDVVDGTCVAVN 180
            GFTDVHIRDMEYCATLDGFAVVFNDGKVGFITPVSSRFTAEQLHGVWPQDVVDGTCVAVN
Sbjct: 121  GFTDVHIRDMEYCATLDGFAVVFNDGKVGFITPVSSRFTAEQLHGVWPQDVVDGTCVAVN 180

Query: 181  NKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLELTAKQYPDIWNKTGAVKLMRWSPDNS 240
            NKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLELTAKQYPDIWNKTGAVKLMRWSPDNS
Sbjct: 181  NKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLELTAKQYPDIWNKTGAVKLMRWSPDNS 240

Query: 241  VVIVTWEYGGLSLWSVFGAQLICTLGGDFAYRSDGTKKDPLKINSMSWGAEGYHLWVISG 300
            VVIVTWEYGGLSLWSVFGAQLICTLGGDFAYRSDGTKKDPLKINSMSWGAEGYHLWVISG
Sbjct: 241  VVIVTWEYGGLSLWSVFGAQLICTLGGDFAYRSDGTKKDPLKINSMSWGAEGYHLWVISG 300

Query: 301  FGSQNTEIESDLRSVVKQPSILLFQFIKSVLTVNPCMSNQEQVLLQGEDRLYLNCGEASQ 360
            FGSQNTEIESDLRSVVKQPSILLFQFIKSVLTVNPCMSNQEQVLLQGEDRLYLNCGEASQ
Sbjct: 301  FGSQNTEIESDLRSVVKQPSILLFQFIKSVLTVNPCMSNQEQVLLQGEDRLYLNCGEASQ 360

Query: 361  TQNPRSSSTHSEHKPSREKSPFADGGLESQGLSTLLGHRHWHVVQISSTYLESNWPIRFS 420
            TQNPRSSSTHSEHKPSREKSPFADGGLESQGLSTLLGHRHWHVVQISSTYLESNWPIRFS
Sbjct: 361  TQNPRSSSTHSEHKPSREKSPFADGGLESQGLSTLLGHRHWHVVQISSTYLESNWPIRFS 420

Query: 421  AIDKLGQNIAVVGKFGFAHYSLLTKKWKLFGNITQEQNMIVTGGLAWWNDFMVLACYNIN 480
            AIDKLGQNIAVVGKFGFAHYSLLTKKWKLFGNITQEQNMIVTGGLAWWNDFMVLACYNIN
Sbjct: 421  AIDKLGQNIAVVGKFGFAHYSLLTKKWKLFGNITQEQNMIVTGGLAWWNDFMVLACYNIN 480

Query: 481  DRQEELRVYLRTSNLDNAFAHVTKAQAETLLLSVFQDMVIVFRADCSICLYSIERKSDGP 540
            DRQEELRVYLRTSNLDNAFAHVTKAQAETLLLSVFQDMVIVFRADCSICLYSIERKSDGP
Sbjct: 481  DRQEELRVYLRTSNLDNAFAHVTKAQAETLLLSVFQDMVIVFRADCSICLYSIERKSDGP 540

Query: 541  NTTAGIQVLQEVSMSRYIPHPFLVVSVTLTSVSTENGITLKMPQQARGAESIMLNLAGQL 600
            NTTAGIQVLQEVSMSRYIPHPFLVVSVTLTSVSTENGITLKMPQQARGAESIMLNLAGQL
Sbjct: 541  NTTAGIQVLQEVSMSRYIPHPFLVVSVTLTSVSTENGITLKMPQQARGAESIMLNLAGQL 600

Query: 601  IMMQRDRSGPQIREKDSNPNNQRKLLPFCPPVVLAQSVENVWTTCRANKQKRHLLEALWL 660
            IMMQRDRSGPQIREKDSNPNNQRKLLPFCPPVVLAQSVENVWTTCRANKQKRHLLEALWL
Sbjct: 601  IMMQRDRSGPQIREKDSNPNNQRKLLPFCPPVVLAQSVENVWTTCRANKQKRHLLEALWL 660

Query: 661  SCGGAGMKVWLPLFPRDHRKPHSFLSQRIMLPFHINIYPLAVLFEDALVLGAVNDTLLYD 720
            SCGGAGMKVWLPLFPRDHRKPHSFLSQRIMLPFHINIYPLAVLFEDALVLGAVNDTLLYD
Sbjct: 661  SCGGAGMKVWLPLFPRDHRKPHSFLSQRIMLPFHINIYPLAVLFEDALVLGAVNDTLLYD 720

Query: 721  SLYTRNNAREQLEVLFPFCVVERTSQIYLHHILRQLLVRNLGEQALLLAQSCATLPYFPH 780
            SLYTRNNAREQLEVLFPFCVVERTSQIYLHHILRQLLVRNLGEQALLLAQSCATLPYFPH
Sbjct: 721  SLYTRNNAREQLEVLFPFCVVERTSQIYLHHILRQLLVRNLGEQALLLAQSCATLPYFPH 780

Query: 781  VLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVHCARKTEYALWNYLFAA 840
            VLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVHCARKTEYALWNYLFAA
Sbjct: 781  VLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVHCARKTEYALWNYLFAA 840

Query: 841  VGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFNTALEQGKWDLCRHMI 900
            VGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFNTALEQGKWDLCRHMI
Sbjct: 841  VGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFNTALEQGKWDLCRHMI 900

Query: 901  RFLKAIGSGESETPPSTPTAQEPSSSGGFEFFRNRSISLSQSAENVPASKFSLQKTLSMP 960
            RFLKAIGSGESETPPSTPTAQEPSSSGGFEFFRNRSISLSQSAENVPASKFSLQKTLSMP
Sbjct: 901  RFLKAIGSGESETPPSTPTAQEPSSSGGFEFFRNRSISLSQSAENVPASKFSLQKTLSMP 960

Query: 961  SGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEDVRLKDLGCFAAQLGFELISWLCKERT 1020
            SGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEDVRLKDLGCFAAQLGFELISWLCKERT
Sbjct: 961  SGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEDVRLKDLGCFAAQLGFELISWLCKERT 1020

Query: 1021 RAARVDNFVIALKRLHKDFLWPLPIIPASSISSPFKNGKYRTGNVDFMSLVQGELYFTPC 1080
            RAARVDNFVIALKRLHKDFLWPLPIIPASSISSPFKNGKYRTGNVDFMSLVQGELYFTPC
Sbjct: 1021 RAARVDNFVIALKRLHKDFLWPLPIIPASSISSPFKNGKYRTGNVDFMSLVQGELYFTPC 1080

Query: 1081 IYTFCY 1086
            IYTFCY
Sbjct: 1081 IYTFCY 1086


>gi|75832029 connexin 43-interacting protein 150 isoform a [Homo
            sapiens]
          Length = 1344

 Score = 2151 bits (5574), Expect = 0.0
 Identities = 1062/1062 (100%), Positives = 1062/1062 (100%)

Query: 1    MIAVSTANGYILFFHITSTRGDKYLYEPVYPKGSPQMKGTPHFKEEQCAPALNLEMRKIL 60
            MIAVSTANGYILFFHITSTRGDKYLYEPVYPKGSPQMKGTPHFKEEQCAPALNLEMRKIL
Sbjct: 1    MIAVSTANGYILFFHITSTRGDKYLYEPVYPKGSPQMKGTPHFKEEQCAPALNLEMRKIL 60

Query: 61   DLQAPIMSLQSVLEDLLVATSDGLLHLIHWEGMTNGRKAINLCTVPFSVDLQSSRVGSFL 120
            DLQAPIMSLQSVLEDLLVATSDGLLHLIHWEGMTNGRKAINLCTVPFSVDLQSSRVGSFL
Sbjct: 61   DLQAPIMSLQSVLEDLLVATSDGLLHLIHWEGMTNGRKAINLCTVPFSVDLQSSRVGSFL 120

Query: 121  GFTDVHIRDMEYCATLDGFAVVFNDGKVGFITPVSSRFTAEQLHGVWPQDVVDGTCVAVN 180
            GFTDVHIRDMEYCATLDGFAVVFNDGKVGFITPVSSRFTAEQLHGVWPQDVVDGTCVAVN
Sbjct: 121  GFTDVHIRDMEYCATLDGFAVVFNDGKVGFITPVSSRFTAEQLHGVWPQDVVDGTCVAVN 180

Query: 181  NKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLELTAKQYPDIWNKTGAVKLMRWSPDNS 240
            NKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLELTAKQYPDIWNKTGAVKLMRWSPDNS
Sbjct: 181  NKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLELTAKQYPDIWNKTGAVKLMRWSPDNS 240

Query: 241  VVIVTWEYGGLSLWSVFGAQLICTLGGDFAYRSDGTKKDPLKINSMSWGAEGYHLWVISG 300
            VVIVTWEYGGLSLWSVFGAQLICTLGGDFAYRSDGTKKDPLKINSMSWGAEGYHLWVISG
Sbjct: 241  VVIVTWEYGGLSLWSVFGAQLICTLGGDFAYRSDGTKKDPLKINSMSWGAEGYHLWVISG 300

Query: 301  FGSQNTEIESDLRSVVKQPSILLFQFIKSVLTVNPCMSNQEQVLLQGEDRLYLNCGEASQ 360
            FGSQNTEIESDLRSVVKQPSILLFQFIKSVLTVNPCMSNQEQVLLQGEDRLYLNCGEASQ
Sbjct: 301  FGSQNTEIESDLRSVVKQPSILLFQFIKSVLTVNPCMSNQEQVLLQGEDRLYLNCGEASQ 360

Query: 361  TQNPRSSSTHSEHKPSREKSPFADGGLESQGLSTLLGHRHWHVVQISSTYLESNWPIRFS 420
            TQNPRSSSTHSEHKPSREKSPFADGGLESQGLSTLLGHRHWHVVQISSTYLESNWPIRFS
Sbjct: 361  TQNPRSSSTHSEHKPSREKSPFADGGLESQGLSTLLGHRHWHVVQISSTYLESNWPIRFS 420

Query: 421  AIDKLGQNIAVVGKFGFAHYSLLTKKWKLFGNITQEQNMIVTGGLAWWNDFMVLACYNIN 480
            AIDKLGQNIAVVGKFGFAHYSLLTKKWKLFGNITQEQNMIVTGGLAWWNDFMVLACYNIN
Sbjct: 421  AIDKLGQNIAVVGKFGFAHYSLLTKKWKLFGNITQEQNMIVTGGLAWWNDFMVLACYNIN 480

Query: 481  DRQEELRVYLRTSNLDNAFAHVTKAQAETLLLSVFQDMVIVFRADCSICLYSIERKSDGP 540
            DRQEELRVYLRTSNLDNAFAHVTKAQAETLLLSVFQDMVIVFRADCSICLYSIERKSDGP
Sbjct: 481  DRQEELRVYLRTSNLDNAFAHVTKAQAETLLLSVFQDMVIVFRADCSICLYSIERKSDGP 540

Query: 541  NTTAGIQVLQEVSMSRYIPHPFLVVSVTLTSVSTENGITLKMPQQARGAESIMLNLAGQL 600
            NTTAGIQVLQEVSMSRYIPHPFLVVSVTLTSVSTENGITLKMPQQARGAESIMLNLAGQL
Sbjct: 541  NTTAGIQVLQEVSMSRYIPHPFLVVSVTLTSVSTENGITLKMPQQARGAESIMLNLAGQL 600

Query: 601  IMMQRDRSGPQIREKDSNPNNQRKLLPFCPPVVLAQSVENVWTTCRANKQKRHLLEALWL 660
            IMMQRDRSGPQIREKDSNPNNQRKLLPFCPPVVLAQSVENVWTTCRANKQKRHLLEALWL
Sbjct: 601  IMMQRDRSGPQIREKDSNPNNQRKLLPFCPPVVLAQSVENVWTTCRANKQKRHLLEALWL 660

Query: 661  SCGGAGMKVWLPLFPRDHRKPHSFLSQRIMLPFHINIYPLAVLFEDALVLGAVNDTLLYD 720
            SCGGAGMKVWLPLFPRDHRKPHSFLSQRIMLPFHINIYPLAVLFEDALVLGAVNDTLLYD
Sbjct: 661  SCGGAGMKVWLPLFPRDHRKPHSFLSQRIMLPFHINIYPLAVLFEDALVLGAVNDTLLYD 720

Query: 721  SLYTRNNAREQLEVLFPFCVVERTSQIYLHHILRQLLVRNLGEQALLLAQSCATLPYFPH 780
            SLYTRNNAREQLEVLFPFCVVERTSQIYLHHILRQLLVRNLGEQALLLAQSCATLPYFPH
Sbjct: 721  SLYTRNNAREQLEVLFPFCVVERTSQIYLHHILRQLLVRNLGEQALLLAQSCATLPYFPH 780

Query: 781  VLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVHCARKTEYALWNYLFAA 840
            VLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVHCARKTEYALWNYLFAA
Sbjct: 781  VLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVHCARKTEYALWNYLFAA 840

Query: 841  VGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFNTALEQGKWDLCRHMI 900
            VGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFNTALEQGKWDLCRHMI
Sbjct: 841  VGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFNTALEQGKWDLCRHMI 900

Query: 901  RFLKAIGSGESETPPSTPTAQEPSSSGGFEFFRNRSISLSQSAENVPASKFSLQKTLSMP 960
            RFLKAIGSGESETPPSTPTAQEPSSSGGFEFFRNRSISLSQSAENVPASKFSLQKTLSMP
Sbjct: 901  RFLKAIGSGESETPPSTPTAQEPSSSGGFEFFRNRSISLSQSAENVPASKFSLQKTLSMP 960

Query: 961  SGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEDVRLKDLGCFAAQLGFELISWLCKERT 1020
            SGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEDVRLKDLGCFAAQLGFELISWLCKERT
Sbjct: 961  SGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEDVRLKDLGCFAAQLGFELISWLCKERT 1020

Query: 1021 RAARVDNFVIALKRLHKDFLWPLPIIPASSISSPFKNGKYRT 1062
            RAARVDNFVIALKRLHKDFLWPLPIIPASSISSPFKNGKYRT
Sbjct: 1021 RAARVDNFVIALKRLHKDFLWPLPIIPASSISSPFKNGKYRT 1062


>gi|14195601 protein phosphatase 1, regulatory (inhibitor) subunit
           12B isoform b [Homo sapiens]
          Length = 998

 Score = 37.7 bits (86), Expect = 0.059
 Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 17/178 (9%)

Query: 300 GFGSQNTEIESDLRSVVKQPSILLFQFIKSVLTVNPCMSNQEQVLLQGEDRLYLNCGEAS 359
           G  +   E+ SDL        +LL Q  K  + +      +EQ +LQ + R +LN G+  
Sbjct: 151 GIVNSEGEVPSDLAEEPAMKDLLLEQVKKQGIDLEQSRKEEEQQMLQ-DARQWLNSGKIE 209

Query: 360 QTQNPRSSST---------HSEHKPSREKSPFADGGLESQGLSTLLGHRHWHVVQISSTY 410
             +  RS +T         +SE      ++ +     +  G + L    HW V +  S  
Sbjct: 210 DVRQARSGATALHVAAAKGYSEVLRLLIQAGYELNVQDYDGWTPLHAAAHWGVKEACSIL 269

Query: 411 LES--NWPIRFSAIDKLGQNIAVVGKFGFA-HYSLLTKKWKLFGNITQEQNMIVTGGL 465
            E+  +  IR    +KLGQ    V   G   H  LL KK  +  +  + +N ++   L
Sbjct: 270 AEALCDMDIR----NKLGQTPFDVADEGLVEHLELLQKKQNVLRSEKETRNKLIESDL 323


>gi|4505319 protein phosphatase 1, regulatory (inhibitor) subunit
           12B isoform a [Homo sapiens]
          Length = 982

 Score = 37.7 bits (86), Expect = 0.059
 Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 17/178 (9%)

Query: 300 GFGSQNTEIESDLRSVVKQPSILLFQFIKSVLTVNPCMSNQEQVLLQGEDRLYLNCGEAS 359
           G  +   E+ SDL        +LL Q  K  + +      +EQ +LQ + R +LN G+  
Sbjct: 151 GIVNSEGEVPSDLAEEPAMKDLLLEQVKKQGIDLEQSRKEEEQQMLQ-DARQWLNSGKIE 209

Query: 360 QTQNPRSSST---------HSEHKPSREKSPFADGGLESQGLSTLLGHRHWHVVQISSTY 410
             +  RS +T         +SE      ++ +     +  G + L    HW V +  S  
Sbjct: 210 DVRQARSGATALHVAAAKGYSEVLRLLIQAGYELNVQDYDGWTPLHAAAHWGVKEACSIL 269

Query: 411 LES--NWPIRFSAIDKLGQNIAVVGKFGFA-HYSLLTKKWKLFGNITQEQNMIVTGGL 465
            E+  +  IR    +KLGQ    V   G   H  LL KK  +  +  + +N ++   L
Sbjct: 270 AEALCDMDIR----NKLGQTPFDVADEGLVEHLELLQKKQNVLRSEKETRNKLIESDL 323


>gi|31077211 hypoxia-inducible factor 1, alpha subunit isoform 2
           [Homo sapiens]
          Length = 735

 Score = 34.7 bits (78), Expect = 0.50
 Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 15/180 (8%)

Query: 448 KLFGNITQEQNMIVTGGLAWWNDFMVLACYNINDRQEELRVYLRTSNLDNAFAHVTKAQA 507
           KLF   T+ +N   T       D  +LA Y   D   +LR + + S L+++ A    A  
Sbjct: 538 KLFAEDTEAKNPFSTQDTDL--DLEMLAPYIPMDDDFQLRSFDQLSPLESSSASPESASP 595

Query: 508 ETLLLSVFQDMVIVFRADCSICLYSIERKSDGPNTTAGIQVLQEVSMSRYIPHPFLVVSV 567
           ++ + +VFQ   I             E  ++   TTA    L+ V+  R      L+ S 
Sbjct: 596 QSTV-TVFQQTQIQ------------EPTANATTTTATTDELKTVTKDRMEDIKILIASP 642

Query: 568 TLTSVSTENGITLKMPQQARGAESIMLNLAGQLIMMQRDRSGPQIREKDSNPNNQRKLLP 627
           + T +  E       P +   + +   N AG+ ++ Q ++S P+     S   +QR  +P
Sbjct: 643 SPTHIHKETTSATSSPYRDTQSRTASPNRAGKGVIEQTEKSHPRSPNVLSVALSQRTTVP 702


>gi|4504385 hypoxia-inducible factor 1, alpha subunit isoform 1
           [Homo sapiens]
          Length = 826

 Score = 34.7 bits (78), Expect = 0.50
 Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 15/180 (8%)

Query: 448 KLFGNITQEQNMIVTGGLAWWNDFMVLACYNINDRQEELRVYLRTSNLDNAFAHVTKAQA 507
           KLF   T+ +N   T       D  +LA Y   D   +LR + + S L+++ A    A  
Sbjct: 538 KLFAEDTEAKNPFSTQDTDL--DLEMLAPYIPMDDDFQLRSFDQLSPLESSSASPESASP 595

Query: 508 ETLLLSVFQDMVIVFRADCSICLYSIERKSDGPNTTAGIQVLQEVSMSRYIPHPFLVVSV 567
           ++ + +VFQ   I             E  ++   TTA    L+ V+  R      L+ S 
Sbjct: 596 QSTV-TVFQQTQIQ------------EPTANATTTTATTDELKTVTKDRMEDIKILIASP 642

Query: 568 TLTSVSTENGITLKMPQQARGAESIMLNLAGQLIMMQRDRSGPQIREKDSNPNNQRKLLP 627
           + T +  E       P +   + +   N AG+ ++ Q ++S P+     S   +QR  +P
Sbjct: 643 SPTHIHKETTSATSSPYRDTQSRTASPNRAGKGVIEQTEKSHPRSPNVLSVALSQRTTVP 702


>gi|157952215 protein tyrosine phosphatase, receptor type, B isoform a
            [Homo sapiens]
          Length = 2215

 Score = 32.0 bits (71), Expect = 3.3
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 7/61 (11%)

Query: 271  YRSDGTKKDPLKINSMS-WGAEG------YHLWVISGFGSQNTEIESDLRSVVKQPSILL 323
            Y  +GTKK+  K   ++ W  +G      Y LWV++  G  + ++ ++ R+    PS++ 
Sbjct: 1427 YNPNGTKKENWKDKDLTEWRFQGLVPGRKYVLWVVTHSGDLSNKVTAESRTAPSPPSLMS 1486

Query: 324  F 324
            F
Sbjct: 1487 F 1487


>gi|157952213 protein tyrosine phosphatase, receptor type, B isoform b
            precursor [Homo sapiens]
          Length = 1997

 Score = 32.0 bits (71), Expect = 3.3
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 7/61 (11%)

Query: 271  YRSDGTKKDPLKINSMS-WGAEG------YHLWVISGFGSQNTEIESDLRSVVKQPSILL 323
            Y  +GTKK+  K   ++ W  +G      Y LWV++  G  + ++ ++ R+    PS++ 
Sbjct: 1209 YNPNGTKKENWKDKDLTEWRFQGLVPGRKYVLWVVTHSGDLSNKVTAESRTAPSPPSLMS 1268

Query: 324  F 324
            F
Sbjct: 1269 F 1269


>gi|21536371 telomerase-associated protein 1 [Homo sapiens]
          Length = 2627

 Score = 31.6 bits (70), Expect = 4.3
 Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 36/202 (17%)

Query: 192  SGSVQVYTIDNSTGAMLL-----SHKLELTAKQYPD--IWNKTGAVKLMRWSPDNSVVIV 244
            SG V+   +  ++G ML      S +L    K+  D  I   + AV  + W+PD S+ + 
Sbjct: 2238 SGPVRAAAVSETSGLMLTASEDGSVRLWQVPKEADDTCIPRSSAAVTAVAWAPDGSMAVS 2297

Query: 245  TWEYGGLSLWSVFGAQLICTLGGDFAYRSDGTKKDPLKINSMSWGAEGYHLWVISGFGSQ 304
              + G L LW                 ++  T + P  I ++ W +   H + +     +
Sbjct: 2298 GNQAGELILWQ--------------EAKAVATAQAPGHIGALIWSSA--HTFFVLSADEK 2341

Query: 305  NTEIESDLR--SVVKQPSILLFQFIKSVLTVNPCM--SNQEQVLLQGEDRLYLNC---GE 357
             +E +  LR  S     S+ L + ++  L V   +  +     L+  +  L L C   G+
Sbjct: 2342 ISEWQVKLRKGSAPGNLSLHLNRILQEDLGVLTSLDWAPDGHFLILAKADLKLLCMKPGD 2401

Query: 358  A------SQTQNPRSSSTHSEH 373
            A      S T+NP   STH E+
Sbjct: 2402 APSEIWSSYTENPMILSTHKEY 2423


>gi|134133292 WD repeat domain 27 [Homo sapiens]
          Length = 857

 Score = 31.6 bits (70), Expect = 4.3
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 228 GAVKLMRWSPDNSVVIVTWEYGGLSLWSVFGAQLICTLGGD 268
           GAV  + WS D   ++     G L +WS  GA+L   LG D
Sbjct: 586 GAVNAVCWSQDRRWLLSAARDGTLRMWSARGAELALLLGKD 626


>gi|55743108 ATG16 autophagy related 16-like 2 [Homo sapiens]
          Length = 619

 Score = 30.8 bits (68), Expect = 7.3
 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 6/57 (10%)

Query: 751 HILRQLLVRNLGEQALLLAQSCATLPYFPHVLELMLHEVLEEEATSREPIPDPLLPT 807
           HI+RQL +R+  ++AL L      +P + H+LE    E+L++ +   +P P+ + PT
Sbjct: 17  HIVRQLRLRDRTQKALFL----ELVPAYNHLLEKA--ELLDKFSKKLQPEPNSVTPT 67


>gi|134254450 patched isoform S [Homo sapiens]
          Length = 1296

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 13/98 (13%)

Query: 159 TAEQLHGVWPQD---VVDGTCVAVNNKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLE- 214
           TA   +   P D   V++G C  ++ KY       + G     T+ NSTG ++ +H L+ 
Sbjct: 156 TAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGG----TVKNSTGKLVSAHALQT 211

Query: 215 ----LTAKQYPDIWNKTGAVKLMRWSPDNSVVIV-TWE 247
               +T KQ  + +     V  + W+ D +  I+  W+
Sbjct: 212 MFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQ 249


>gi|134254435 patched isoform S [Homo sapiens]
          Length = 1296

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 13/98 (13%)

Query: 159 TAEQLHGVWPQD---VVDGTCVAVNNKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLE- 214
           TA   +   P D   V++G C  ++ KY       + G     T+ NSTG ++ +H L+ 
Sbjct: 156 TAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGG----TVKNSTGKLVSAHALQT 211

Query: 215 ----LTAKQYPDIWNKTGAVKLMRWSPDNSVVIV-TWE 247
               +T KQ  + +     V  + W+ D +  I+  W+
Sbjct: 212 MFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQ 249


>gi|134254468 patched isoform S [Homo sapiens]
          Length = 1296

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 13/98 (13%)

Query: 159 TAEQLHGVWPQD---VVDGTCVAVNNKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLE- 214
           TA   +   P D   V++G C  ++ KY       + G     T+ NSTG ++ +H L+ 
Sbjct: 156 TAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGG----TVKNSTGKLVSAHALQT 211

Query: 215 ----LTAKQYPDIWNKTGAVKLMRWSPDNSVVIV-TWE 247
               +T KQ  + +     V  + W+ D +  I+  W+
Sbjct: 212 MFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQ 249


>gi|134254452 patched isoform S [Homo sapiens]
          Length = 1296

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 13/98 (13%)

Query: 159 TAEQLHGVWPQD---VVDGTCVAVNNKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLE- 214
           TA   +   P D   V++G C  ++ KY       + G     T+ NSTG ++ +H L+ 
Sbjct: 156 TAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGG----TVKNSTGKLVSAHALQT 211

Query: 215 ----LTAKQYPDIWNKTGAVKLMRWSPDNSVVIV-TWE 247
               +T KQ  + +     V  + W+ D +  I+  W+
Sbjct: 212 MFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQ 249


>gi|134254432 patched isoform L' [Homo sapiens]
          Length = 1446

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 13/98 (13%)

Query: 159 TAEQLHGVWPQD---VVDGTCVAVNNKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLE- 214
           TA   +   P D   V++G C  ++ KY       + G     T+ NSTG ++ +H L+ 
Sbjct: 306 TAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGG----TVKNSTGKLVSAHALQT 361

Query: 215 ----LTAKQYPDIWNKTGAVKLMRWSPDNSVVIV-TWE 247
               +T KQ  + +     V  + W+ D +  I+  W+
Sbjct: 362 MFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQ 399


>gi|134254466 patched isoform M [Homo sapiens]
          Length = 1381

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 13/98 (13%)

Query: 159 TAEQLHGVWPQD---VVDGTCVAVNNKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLE- 214
           TA   +   P D   V++G C  ++ KY       + G     T+ NSTG ++ +H L+ 
Sbjct: 241 TAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGG----TVKNSTGKLVSAHALQT 296

Query: 215 ----LTAKQYPDIWNKTGAVKLMRWSPDNSVVIV-TWE 247
               +T KQ  + +     V  + W+ D +  I+  W+
Sbjct: 297 MFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQ 334


>gi|134254446 patched isoform L [Homo sapiens]
          Length = 1447

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 13/98 (13%)

Query: 159 TAEQLHGVWPQD---VVDGTCVAVNNKYRLMAFGCVSGSVQVYTIDNSTGAMLLSHKLE- 214
           TA   +   P D   V++G C  ++ KY       + G     T+ NSTG ++ +H L+ 
Sbjct: 307 TAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGG----TVKNSTGKLVSAHALQT 362

Query: 215 ----LTAKQYPDIWNKTGAVKLMRWSPDNSVVIV-TWE 247
               +T KQ  + +     V  + W+ D +  I+  W+
Sbjct: 363 MFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQ 400


>gi|23821044 zinc finger/RING finger 2 [Homo sapiens]
          Length = 242

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 8/67 (11%)

Query: 914 PPSTPTAQEPSSSGGFEF--------FRNRSISLSQSAENVPASKFSLQKTLSMPSGPSG 965
           P   P+A +PS+SGG              RS SL  +  +V +   + Q   S+P+  SG
Sbjct: 50  PAQVPSAHQPSASGGAAAAAAAPAAPAAPRSRSLGGAVGSVASGARAAQSPFSIPNSSSG 109

Query: 966 KRWSKDS 972
              S+DS
Sbjct: 110 PYGSQDS 116


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,753,197
Number of Sequences: 37866
Number of extensions: 1808715
Number of successful extensions: 4419
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 4411
Number of HSP's gapped (non-prelim): 22
length of query: 1086
length of database: 18,247,518
effective HSP length: 113
effective length of query: 973
effective length of database: 13,968,660
effective search space: 13591506180
effective search space used: 13591506180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.