Guide to the Human Genome
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Name: LOC441864 Sequence: fasta or formatted (271aa) NCBI GI: 208879429
Description:

hypothetical LOC441864

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         19           2
 C cysteine            2.2          6           1
 D aspartate           3.3          9           1
 E glutamate           4.4         12           1
 F phenylalanine       4.1         11           1
 G glycine             8.1         22           2
 H histidine           1.1          3           1
 I isoleucine          3.7         10           2
 K lysine              4.4         12           1
 L leucine            11.8         32           4
 M methionine          1.5          4           1
 N asparagine          3.3          9           2
 P proline             7.4         20           2
 Q glutamine           3.7         10           1
 R arginine            5.2         14           1
 S serine             10.0         27           2
 T threonine           5.9         16           2
 V valine              8.1         22           2
 W tryptophan          1.5          4           1
 Y tyrosine            3.3          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical LOC441864 
IGSF1                 0.197   immunoglobulin superfamily, member 1 isoform 1 [Homo...
OSCAR                 0.185   osteoclast-associated receptor isoform 4 
OSCAR                 0.185   osteoclast-associated receptor isoform 5 
OSCAR                 0.185   osteoclast-associated receptor isoform 3 
GP6                   0.185   glycoprotein VI (platelet) isoform 2 
GP6                   0.166   glycoprotein VI (platelet) isoform 1 
FCAR                  0.163   Fc alpha receptor isoform a precursor 
LILRB3                0.149   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB3                0.149   leukocyte immunoglobulin-like receptor, subfamily B...
LILRA6                0.145   leukocyte immunoglobulin-like receptor, subfamily A...
LILRB4                0.143   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB4                0.143   leukocyte immunoglobulin-like receptor, subfamily B...
LILRA5                0.141   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA2                0.141   leukocyte immunoglobulin-like receptor, subfamily A (...
LILRB5                0.138   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB5                0.138   leukocyte immunoglobulin-like receptor, subfamily B, ...
LILRA4                0.138   leukocyte immunoglobulin-like receptor subfamily A m...
NCR1                  0.136   natural cytotoxicity triggering receptor 1 isoform ...
FCAR                  0.136   Fc alpha receptor isoform d 
VSTM1                 0.132   V-set and transmembrane domain containing 1 precurs...
LILRB2                0.132   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB2                0.132   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB5                0.132   leukocyte immunoglobulin-like receptor, subfamily B...
LILRA2                0.130   leukocyte immunoglobulin-like receptor, subfamily A...
LILRA5                0.128   leukocyte immunoglobulin-like receptor subfamily A m...
OSCAR                 0.128   osteoclast-associated receptor isoform 1 
KIR3DL1               0.128   killer cell immunoglobulin-like receptor, three dom...
LILRA1                0.126   leukocyte immunoglobulin-like receptor, subfamily A (...
KIR2DL4               0.126   killer cell immunoglobulin-like receptor, two domai...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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