Guide to the Human Genome
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Name: OSCAR Sequence: fasta or formatted (267aa) NCBI GI: 45580713
Description:

osteoclast-associated receptor isoform 3

Referenced in:

Bone and Related Tissues
Additional Genes in Development

Other entries for this name:
alt prot [252aa] osteoclast-associated receptor isoform 5
alt prot [263aa] osteoclast-associated receptor isoform 4
alt prot [286aa] osteoclast-associated receptor isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         24           2
 C cysteine            2.2          6           2
 D aspartate           3.0          8           1
 E glutamate           4.1         11           2
 F phenylalanine       3.0          8           2
 G glycine             7.9         21           2
 H histidine           1.5          4           1
 I isoleucine          3.4          9           2
 K lysine              0.7          2           1
 L leucine            13.1         35           2
 M methionine          0.7          2           1
 N asparagine          1.9          5           1
 P proline            10.5         28           2
 Q glutamine           3.4          9           1
 R arginine            7.5         20           2
 S serine              7.5         20           2
 T threonine           4.9         13           1
 V valine              9.0         24           2
 W tryptophan          3.0          8           1
 Y tyrosine            3.7         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   osteoclast-associated receptor isoform 3 
OSCAR                 0.977   osteoclast-associated receptor isoform 4 
OSCAR                 0.917   osteoclast-associated receptor isoform 5 
OSCAR                 0.837   osteoclast-associated receptor isoform 1 
IGSF1                 0.225   immunoglobulin superfamily, member 1 isoform 1 [Homo...
LILRA2                0.186   leukocyte immunoglobulin-like receptor, subfamily A (...
LOC441864             0.184   hypothetical LOC441864 
LILRA5                0.176   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA2                0.176   leukocyte immunoglobulin-like receptor, subfamily A...
LILRA5                0.176   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA6                0.159   leukocyte immunoglobulin-like receptor, subfamily A...
LILRA4                0.152   leukocyte immunoglobulin-like receptor subfamily A m...
KIR3DL3               0.148   killer cell immunoglobulin-like receptor, three doma...
LILRA1                0.136   leukocyte immunoglobulin-like receptor, subfamily A (...
LILRB3                0.136   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB3                0.136   leukocyte immunoglobulin-like receptor, subfamily B...
KIR3DL2               0.134   killer cell immunoglobulin-like receptor, three dom...
KIR2DL5B              0.134   killer cell immunoglobulin-like receptor, two domain...
KIR2DL5A              0.134   killer cell immunoglobulin-like receptor, two domain...
LILRB4                0.129   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB4                0.129   leukocyte immunoglobulin-like receptor, subfamily B...
KIR2DL4               0.129   killer cell immunoglobulin-like receptor, two domai...
KIR2DL4               0.129   killer cell immunoglobulin-like receptor, two domai...
KIR2DL4               0.129   killer cell immunoglobulin-like receptor, two domai...
GP6                   0.127   glycoprotein VI (platelet) isoform 1 
GP6                   0.127   glycoprotein VI (platelet) isoform 2 
LILRA5                0.125   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA5                0.125   leukocyte immunoglobulin-like receptor subfamily A m...
KIR3DP1               0.125   killer-cell Ig-like receptor 
FCAR                  0.125   Fc alpha receptor isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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