Guide to the Human Genome
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Name: OSCAR Sequence: fasta or formatted (252aa) NCBI GI: 19557664
Description:

osteoclast-associated receptor isoform 5

Referenced in:

Bone and Related Tissues
Additional Genes in Development

Other entries for this name:
alt prot [263aa] osteoclast-associated receptor isoform 4
alt prot [267aa] osteoclast-associated receptor isoform 3
alt prot [286aa] osteoclast-associated receptor isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         23           2
 C cysteine            2.0          5           2
 D aspartate           2.8          7           1
 E glutamate           4.4         11           2
 F phenylalanine       3.6          9           2
 G glycine             8.3         21           2
 H histidine           1.2          3           1
 I isoleucine          2.4          6           1
 K lysine              0.8          2           1
 L leucine            13.5         34           2
 M methionine          0.8          2           1
 N asparagine          2.0          5           1
 P proline            10.3         26           2
 Q glutamine           3.6          9           1
 R arginine            7.9         20           2
 S serine              7.5         19           2
 T threonine           4.4         11           1
 V valine              8.7         22           2
 W tryptophan          2.8          7           1
 Y tyrosine            4.0         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   osteoclast-associated receptor isoform 5 
OSCAR                 0.978   osteoclast-associated receptor isoform 4 
OSCAR                 0.976   osteoclast-associated receptor isoform 3 
OSCAR                 0.802   osteoclast-associated receptor isoform 1 
IGSF1                 0.240   immunoglobulin superfamily, member 1 isoform 1 [Homo...
LILRA2                0.196   leukocyte immunoglobulin-like receptor, subfamily A (...
LOC441864             0.196   hypothetical LOC441864 
LILRA5                0.188   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA5                0.188   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA2                0.185   leukocyte immunoglobulin-like receptor, subfamily A...
LILRA6                0.165   leukocyte immunoglobulin-like receptor, subfamily A...
LILRA4                0.161   leukocyte immunoglobulin-like receptor subfamily A m...
KIR3DL3               0.159   killer cell immunoglobulin-like receptor, three doma...
KIR3DL2               0.147   killer cell immunoglobulin-like receptor, three dom...
LILRA1                0.147   leukocyte immunoglobulin-like receptor, subfamily A (...
LILRB3                0.145   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB3                0.145   leukocyte immunoglobulin-like receptor, subfamily B...
KIR2DL5B              0.143   killer cell immunoglobulin-like receptor, two domain...
KIR2DL5A              0.143   killer cell immunoglobulin-like receptor, two domain...
LILRB4                0.137   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB4                0.137   leukocyte immunoglobulin-like receptor, subfamily B...
KIR2DL4               0.137   killer cell immunoglobulin-like receptor, two domai...
KIR2DL4               0.137   killer cell immunoglobulin-like receptor, two domai...
KIR2DL4               0.137   killer cell immunoglobulin-like receptor, two domai...
GP6                   0.135   glycoprotein VI (platelet) isoform 1 
GP6                   0.135   glycoprotein VI (platelet) isoform 2 
LILRA5                0.133   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA5                0.133   leukocyte immunoglobulin-like receptor subfamily A m...
KIR3DP1               0.133   killer-cell Ig-like receptor 
FCAR                  0.133   Fc alpha receptor isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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