Guide to the Human Genome
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Name: OSCAR Sequence: fasta or formatted (263aa) NCBI GI: 19557668
Description:

osteoclast-associated receptor isoform 4

Referenced in:

Bone and Related Tissues
Additional Genes in Development

Other entries for this name:
alt prot [252aa] osteoclast-associated receptor isoform 5
alt prot [267aa] osteoclast-associated receptor isoform 3
alt prot [286aa] osteoclast-associated receptor isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         23           2
 C cysteine            2.3          6           2
 D aspartate           3.0          8           1
 E glutamate           4.2         11           2
 F phenylalanine       3.0          8           2
 G glycine             8.0         21           2
 H histidine           1.5          4           1
 I isoleucine          2.7          7           1
 K lysine              0.8          2           1
 L leucine            13.3         35           2
 M methionine          0.8          2           1
 N asparagine          1.9          5           1
 P proline            10.6         28           2
 Q glutamine           3.4          9           1
 R arginine            7.6         20           2
 S serine              7.6         20           2
 T threonine           4.9         13           1
 V valine              8.7         23           2
 W tryptophan          3.0          8           1
 Y tyrosine            3.8         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   osteoclast-associated receptor isoform 4 
OSCAR                 0.989   osteoclast-associated receptor isoform 3 
OSCAR                 0.929   osteoclast-associated receptor isoform 5 
OSCAR                 0.824   osteoclast-associated receptor isoform 1 
IGSF1                 0.228   immunoglobulin superfamily, member 1 isoform 1 [Homo...
LILRA2                0.186   leukocyte immunoglobulin-like receptor, subfamily A (...
LOC441864             0.186   hypothetical LOC441864 
LILRA5                0.180   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA5                0.178   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA2                0.176   leukocyte immunoglobulin-like receptor, subfamily A...
LILRA6                0.157   leukocyte immunoglobulin-like receptor, subfamily A...
LILRA4                0.153   leukocyte immunoglobulin-like receptor subfamily A m...
KIR3DL3               0.149   killer cell immunoglobulin-like receptor, three doma...
LILRA1                0.142   leukocyte immunoglobulin-like receptor, subfamily A (...
LILRB3                0.138   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB3                0.138   leukocyte immunoglobulin-like receptor, subfamily B...
KIR3DL2               0.136   killer cell immunoglobulin-like receptor, three dom...
KIR2DL5B              0.136   killer cell immunoglobulin-like receptor, two domain...
KIR2DL5A              0.136   killer cell immunoglobulin-like receptor, two domain...
LILRB4                0.132   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB4                0.132   leukocyte immunoglobulin-like receptor, subfamily B...
KIR2DL4               0.130   killer cell immunoglobulin-like receptor, two domai...
KIR2DL4               0.130   killer cell immunoglobulin-like receptor, two domai...
KIR2DL4               0.130   killer cell immunoglobulin-like receptor, two domai...
GP6                   0.128   glycoprotein VI (platelet) isoform 1 
GP6                   0.128   glycoprotein VI (platelet) isoform 2 
LILRA5                0.128   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA5                0.126   leukocyte immunoglobulin-like receptor subfamily A m...
KIR3DP1               0.126   killer-cell Ig-like receptor 
FCAR                  0.126   Fc alpha receptor isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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