Search of human proteins with 20336761

Search of human proteins with 20336761

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|20336761 heme binding protein 1 [Homo sapiens]
         (189 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|20336761 heme binding protein 1 [Homo sapiens]                     391   e-109
gi|7657603 heme binding protein 2 [Homo sapiens]                       88   5e-18
gi|25777713 S-phase kinase-associated protein 1 isoform b [Homo ...    28   3.6  
gi|25777711 S-phase kinase-associated protein 1 isoform a [Homo ...    28   3.6  
gi|145701030 transmembrane protease, serine 4 isoform 3 [Homo sa...    28   6.1  
gi|15451940 transmembrane protease, serine 4 isoform 1 [Homo sap...    28   6.1  
gi|7662394 RAB11 family interacting protein 2 (class I) [Homo sa...    28   6.1  
gi|16506297 hypothetical protein LOC92667 [Homo sapiens]               28   6.1  
gi|156523968 poly (ADP-ribose) polymerase family, member 1 [Homo...    27   8.0  
gi|4508009 zinc finger protein 177 [Homo sapiens]                      27   8.0  

>gi|20336761 heme binding protein 1 [Homo sapiens]
          Length = 189

 Score =  391 bits (1004), Expect = e-109
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 1   MLGMIKNSLFGSVETWPWQVLSKGDKEEVAYEERACEGGKFATVEVTDKPVDEALREAMP 60
           MLGMIKNSLFGSVETWPWQVLSKGDKEEVAYEERACEGGKFATVEVTDKPVDEALREAMP
Sbjct: 1   MLGMIKNSLFGSVETWPWQVLSKGDKEEVAYEERACEGGKFATVEVTDKPVDEALREAMP 60

Query: 61  KVAKYAGGTNDKGIGMGMTVPISFAVFPNEDGSLQKKLKVWFRIPNQFQSDPPAPSDKSV 120
           KVAKYAGGTNDKGIGMGMTVPISFAVFPNEDGSLQKKLKVWFRIPNQFQSDPPAPSDKSV
Sbjct: 61  KVAKYAGGTNDKGIGMGMTVPISFAVFPNEDGSLQKKLKVWFRIPNQFQSDPPAPSDKSV 120

Query: 121 KIEEREGITVYSMQFGGYAKEADYVAQATRLRAALEGTATYRGDIYFCTGYDPPMKPYGR 180
           KIEEREGITVYSMQFGGYAKEADYVAQATRLRAALEGTATYRGDIYFCTGYDPPMKPYGR
Sbjct: 121 KIEEREGITVYSMQFGGYAKEADYVAQATRLRAALEGTATYRGDIYFCTGYDPPMKPYGR 180

Query: 181 RNEIWLLKT 189
           RNEIWLLKT
Sbjct: 181 RNEIWLLKT 189


>gi|7657603 heme binding protein 2 [Homo sapiens]
          Length = 205

 Score = 87.8 bits (216), Expect = 5e-18
 Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 1/187 (0%)

Query: 3   GMIKNSLFGSVETWPWQVLSKGDKEEVAYEERACEGGKFATVEVTDKPVDEALREAMPKV 62
           G  +++   +VET  W+       +  +YE R     K+ +  V     D A++    K+
Sbjct: 10  GAAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSVESMDWDSAIQTGFTKL 69

Query: 63  AKYAGGTNDKGIGMGMTVPISFAVFPNEDGSLQKKLKVWFRIPNQFQSDPPAPSDKSVKI 122
             Y  G N+K + + MT P++  V P      +  + +   IP++ Q DPP P +  V I
Sbjct: 70  NSYIQGKNEKEMKIKMTAPVTSYVEPGSGPFSESTITISLYIPSEQQFDPPRPLESDVFI 129

Query: 123 EEREGITVYSMQFGGYAKEADYVAQATRLRAAL-EGTATYRGDIYFCTGYDPPMKPYGRR 181
           E+R  +TV+   F G++       Q   L + L E    +   +Y+  GY+ P+K   R 
Sbjct: 130 EDRAEMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYNSPVKLLNRN 189

Query: 182 NEIWLLK 188
           NE+WL++
Sbjct: 190 NEVWLIQ 196


>gi|25777713 S-phase kinase-associated protein 1 isoform b [Homo
           sapiens]
          Length = 163

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 88  PNEDGSLQKKLKVWFRIPNQFQSDPPAPSDKSVKIEEREGITVYSMQF 135
           PN + ++ KK+  W       + DPP P D   K +  + I V+  +F
Sbjct: 48  PNVNAAILKKVIQWC---THHKDDPPPPEDDENKEKRTDDIPVWDQEF 92


>gi|25777711 S-phase kinase-associated protein 1 isoform a [Homo
           sapiens]
          Length = 160

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 88  PNEDGSLQKKLKVWFRIPNQFQSDPPAPSDKSVKIEEREGITVYSMQF 135
           PN + ++ KK+  W       + DPP P D   K +  + I V+  +F
Sbjct: 48  PNVNAAILKKVIQWC---THHKDDPPPPEDDENKEKRTDDIPVWDQEF 92


>gi|145701030 transmembrane protease, serine 4 isoform 3 [Homo
           sapiens]
          Length = 432

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 10/18 (55%), Positives = 14/18 (77%)

Query: 12  SVETWPWQVLSKGDKEEV 29
           SV++WPWQV  + DK+ V
Sbjct: 207 SVDSWPWQVSIQYDKQHV 224


>gi|15451940 transmembrane protease, serine 4 isoform 1 [Homo
           sapiens]
          Length = 437

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 10/18 (55%), Positives = 14/18 (77%)

Query: 12  SVETWPWQVLSKGDKEEV 29
           SV++WPWQV  + DK+ V
Sbjct: 212 SVDSWPWQVSIQYDKQHV 229


>gi|7662394 RAB11 family interacting protein 2 (class I) [Homo
           sapiens]
          Length = 512

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 67  GGTNDKGIGMGMTVPISFAVFPNEDGSLQKKLKVWFRIPNQFQSDPPAPSDKSVKIEERE 126
           G  ND    +  ++P  FA  P +    ++  + W    N F    P    K  K E+RE
Sbjct: 298 GRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDSSMNLFSK--PIEIRKENKREKRE 355

Query: 127 GITVYSMQFG 136
            ++++    G
Sbjct: 356 KVSLFERVTG 365


>gi|16506297 hypothetical protein LOC92667 [Homo sapiens]
          Length = 344

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 62  VAKYAGGTNDKGIGMGMTVPISFAVFPNEDGSLQKKLKVWFRIPNQFQSDPPAPSDKSVK 121
           VA+  G   +  +  G   P+S    PN+ G  ++  + WF I N  +SD P  SD SV 
Sbjct: 65  VAQTPGSVEEDALLCG---PVSKHKLPNQ-GEDRRVPQNWFPIFNPERSDKPNASDPSVP 120

Query: 122 IE 123
           ++
Sbjct: 121 LK 122


>gi|156523968 poly (ADP-ribose) polymerase family, member 1 [Homo
           sapiens]
          Length = 1014

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 22/172 (12%)

Query: 11  GSVETWPWQVLSKGDKEEVAY--EERACEGGKFATVEVTDKPVDEALREAMPKVAKYAGG 68
           G ++ W        ++EE+ +  E  A +   F+ +   DK   EAL++ +P V      
Sbjct: 152 GMIDRWYHPGCFVKNREELGFRPEYSASQLKGFSLLATEDK---EALKKQLPGVKSEGKR 208

Query: 69  TNDKGIGMGMTVPISFAVFPNEDGSLQKKLK-----VWFRIPNQFQSDPPAPSDKSVKIE 123
             D+  G+            ++D  L+K LK     +W  I ++ +        K + I 
Sbjct: 209 KGDEVDGVDEVAKKKSKKEKDKDSKLEKALKAQNDLIW-NIKDELKKVCSTNDLKELLIF 267

Query: 124 EREGITVYSMQFGGYAKEADYVAQATRLRAAL-----EGTATYRGDIYFCTG 170
            ++ +        G +   D VA      A L      G   ++ D Y+CTG
Sbjct: 268 NKQQVP------SGESAILDRVADGMVFGALLPCEECSGQLVFKSDAYYCTG 313


>gi|4508009 zinc finger protein 177 [Homo sapiens]
          Length = 321

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 6/57 (10%)

Query: 20  VLSKGDKEEVAYEERACEGGKFATVEVTDKPVDEALREAMPKVAKYAGGTNDKGIGM 76
           ++SK D+E++  +ER    G  A  E   KP D    + +P      GG    GI M
Sbjct: 62  LISKVDQEQLKTDERGILQGDCADWETQLKPKDTIAMQNIP------GGKTSNGINM 112


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,544,496
Number of Sequences: 37866
Number of extensions: 308769
Number of successful extensions: 626
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 621
Number of HSP's gapped (non-prelim): 10
length of query: 189
length of database: 18,247,518
effective HSP length: 96
effective length of query: 93
effective length of database: 14,612,382
effective search space: 1358951526
effective search space used: 1358951526
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.