Search of human proteins with 19913426

Search of human proteins with 19913426

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19913426 ATPase, H+ transporting, lysosomal 56/58kDa, V1
subunit B1 [Homo sapiens]
         (513 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19913426 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subu...  1025   0.0  
gi|19913428 vacuolar H+ATPase B2 [Homo sapiens]                       867   0.0  
gi|32189394 mitochondrial ATP synthase beta subunit precursor [H...   122   1e-27
gi|50345984 ATP synthase, H+ transporting, mitochondrial F1 comp...   101   2e-21
gi|4757810 ATP synthase, H+ transporting, mitochondrial F1 compl...   101   2e-21
gi|19913424 ATPase, H+ transporting, lysosomal V1 subunit A [Hom...    82   9e-16
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    33   0.48 
gi|54792082 phosphoinositide-3-kinase, catalytic, alpha polypept...    30   6.9  
gi|38788260 bromodomain PHD finger transcription factor isoform ...    30   6.9  
gi|38788274 bromodomain PHD finger transcription factor isoform ...    30   6.9  
gi|148727368 bromodomain and PHD finger containing, 3 [Homo sapi...    30   6.9  
gi|214010149 gamma-glutamyl carboxylase isoform 2 [Homo sapiens]       29   9.0  
gi|21361163 gamma-glutamyl carboxylase isoform 1 [Homo sapiens]        29   9.0  

>gi|19913426 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit
           B1 [Homo sapiens]
          Length = 513

 Score = 1025 bits (2650), Expect = 0.0
 Identities = 513/513 (100%), Positives = 513/513 (100%)

Query: 1   MAMEIDSRPGGLPGSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFA 60
           MAMEIDSRPGGLPGSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFA
Sbjct: 1   MAMEIDSRPGGLPGSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFA 60

Query: 61  QYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSED 120
           QYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSED
Sbjct: 61  QYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSED 120

Query: 121 MLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARG 180
           MLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARG
Sbjct: 121 MLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARG 180

Query: 181 QKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNFAIVFAAMGVNMETARFFKS 240
           QKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNFAIVFAAMGVNMETARFFKS
Sbjct: 181 QKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNFAIVFAAMGVNMETARFFKS 240

Query: 241 DFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEA 300
           DFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEA
Sbjct: 241 DFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEA 300

Query: 301 LREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILTMPNDDITHPIP 360
           LREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILTMPNDDITHPIP
Sbjct: 301 LREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILTMPNDDITHPIP 360

Query: 361 DLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACY 420
           DLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACY
Sbjct: 361 DLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACY 420

Query: 421 AIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRI 480
           AIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRI
Sbjct: 421 AIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRI 480

Query: 481 FPKEMLKRIPQAVIDEFYSREGALQDLAPDTAL 513
           FPKEMLKRIPQAVIDEFYSREGALQDLAPDTAL
Sbjct: 481 FPKEMLKRIPQAVIDEFYSREGALQDLAPDTAL 513


>gi|19913428 vacuolar H+ATPase B2 [Homo sapiens]
          Length = 511

 Score =  867 bits (2239), Expect = 0.0
 Identities = 428/482 (88%), Positives = 458/482 (95%)

Query: 22  AREHMQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVL 81
           ARE   AV+RNY++ PR+TY+TV  VNGPLV+LD VKF +YAEIVH TLPDGT+RSGQVL
Sbjct: 28  AREQALAVSRNYLSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVL 87

Query: 82  EVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPVVMA 141
           EV+G+KA+VQVFEGTSGIDA+KT+CEFTGDILRTPVSEDMLGRVFNGSGKPID+GPVV+A
Sbjct: 88  EVSGSKAVVQVFEGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLA 147

Query: 142 EDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQIC 201
           EDFLDI GQPINP  RIYPEEMIQTGIS ID MNSIARGQKIPIFSAAGLPHNEIAAQIC
Sbjct: 148 EDFLDIMGQPINPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQIC 207

Query: 202 RQAGLVKKSKAVLDYHDDNFAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDP 261
           RQAGLVKKSK V+DY ++NFAIVFAAMGVNMETARFFKSDFE+NG+M NVCLFLNLANDP
Sbjct: 208 RQAGLVKKSKDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDP 267

Query: 262 TIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYM 321
           TIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYM
Sbjct: 268 TIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYM 327

Query: 322 YTDLATIYERAGRVEGRGGSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQ 381
           YTDLATIYERAGRVEGR GSITQIPILTMPNDDITHPIPDLTG+ITEGQIYVDRQLHNRQ
Sbjct: 328 YTDLATIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQ 387

Query: 382 IYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSE 441
           IYPPINVLPSLSRLMKSAIGEGMTRKDH DVSNQLYACYAIGKDVQAMKAVVGEEALTS+
Sbjct: 388 IYPPINVLPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSD 447

Query: 442 DLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIFPKEMLKRIPQAVIDEFYSRE 501
           DLLYLEFLQKFE+NFI QGPYENR+VFE+LD+GW+LLRIFPKEMLKRIPQ+ + EFY R+
Sbjct: 448 DLLYLEFLQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRD 507

Query: 502 GA 503
            A
Sbjct: 508 SA 509


>gi|32189394 mitochondrial ATP synthase beta subunit precursor [Homo
           sapiens]
          Length = 529

 Score =  122 bits (305), Expect = 1e-27
 Identities = 112/428 (26%), Positives = 195/428 (45%), Gaps = 34/428 (7%)

Query: 80  VLEVA---GTKAIVQV-FEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDK 135
           VLEVA   G   +  +  +GT G+   +   + +G  ++ PV  + LGR+ N  G+PID+
Sbjct: 96  VLEVAQHLGESTVRTIAMDGTEGLVRGQKVLD-SGAPIKIPVGPETLGRIMNVIGEPIDE 154

Query: 136 GPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNE 195
              +  + F  I+ +          +E++ TGI  +D++   A+G KI +F  AG+    
Sbjct: 155 RGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTV 214

Query: 196 IAAQICRQAGLVKKSKAVLDYHDDNFAIVFAAMGVNMETARFFKSDFEQNGTM------G 249
           +  ++         +KA   Y       VFA +G           +  ++G +       
Sbjct: 215 LIMELINNV-----AKAHGGYS------VFAGVGERTREGNDLYHEMIESGVINLKDATS 263

Query: 250 NVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAARE 309
            V L     N+P   R       LT AE+   Q  + VL+ + ++  + +A  EVSA   
Sbjct: 264 KVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLG 323

Query: 310 EVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILTMPNDDITHPIPDLTGFITEG 369
            +P   G+   + TD+ T+ ER      + GSIT +  + +P DD+T P P  T    + 
Sbjct: 324 RIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDA 381

Query: 370 QIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAM 429
              + R +    IYP ++ L S SR+M   I       +H DV+  +       K +Q +
Sbjct: 382 TTVLSRAIAELGIYPAVDPLDSTSRIMDPNI----VGSEHYDVARGVQKILQDYKSLQDI 437

Query: 430 KAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIFPKEMLKRI 489
            A++G + L+ ED L +   +K ++ F++Q P++   VF    +G KL+ +  KE +K  
Sbjct: 438 IAILGMDELSEEDKLTVSRARKIQR-FLSQ-PFQVAEVFTG-HMG-KLVPL--KETIKGF 491

Query: 490 PQAVIDEF 497
            Q +  E+
Sbjct: 492 QQILAGEY 499


>gi|50345984 ATP synthase, H+ transporting, mitochondrial F1
           complex, alpha subunit precursor [Homo sapiens]
          Length = 553

 Score =  101 bits (251), Expect = 2e-21
 Identities = 97/362 (26%), Positives = 157/362 (43%), Gaps = 20/362 (5%)

Query: 44  VCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARK 103
           V S+   +  +  ++  Q  E+V F+    +   G  L +      V VF G   +    
Sbjct: 74  VLSIGDGIARVHGLRNVQAEEMVEFS----SGLKGMSLNLEPDNVGVVVF-GNDKLIKEG 128

Query: 104 TTCEFTGDILRTPVSEDMLGRVFNGSGKPID-KGPV-VMAEDFLDINGQPINPHSRIYPE 161
              + TG I+  PV E++LGRV +  G  ID KGP+       + +    I P  RI   
Sbjct: 129 DIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIP--RISVR 186

Query: 162 EMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNF 221
           E +QTGI  +D +  I RGQ+  I          IA         +   K   D  D+  
Sbjct: 187 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDT------IINQKRFNDGSDEKK 240

Query: 222 AI--VFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFL 279
            +  ++ A+G    T             M    +    A+D    + + P    +  E+ 
Sbjct: 241 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF 300

Query: 280 AYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGR- 338
                KH L+I  D+S  A A R++S      PGR  +PG ++   + + ERA ++    
Sbjct: 301 RDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAF 359

Query: 339 -GGSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMK 397
            GGS+T +P++     D++  IP     IT+GQI+++ +L  + I P INV  S+SR+  
Sbjct: 360 GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGS 419

Query: 398 SA 399
           +A
Sbjct: 420 AA 421


>gi|4757810 ATP synthase, H+ transporting, mitochondrial F1 complex,
           alpha subunit precursor [Homo sapiens]
          Length = 553

 Score =  101 bits (251), Expect = 2e-21
 Identities = 97/362 (26%), Positives = 157/362 (43%), Gaps = 20/362 (5%)

Query: 44  VCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARK 103
           V S+   +  +  ++  Q  E+V F+    +   G  L +      V VF G   +    
Sbjct: 74  VLSIGDGIARVHGLRNVQAEEMVEFS----SGLKGMSLNLEPDNVGVVVF-GNDKLIKEG 128

Query: 104 TTCEFTGDILRTPVSEDMLGRVFNGSGKPID-KGPV-VMAEDFLDINGQPINPHSRIYPE 161
              + TG I+  PV E++LGRV +  G  ID KGP+       + +    I P  RI   
Sbjct: 129 DIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIP--RISVR 186

Query: 162 EMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNF 221
           E +QTGI  +D +  I RGQ+  I          IA         +   K   D  D+  
Sbjct: 187 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDT------IINQKRFNDGSDEKK 240

Query: 222 AI--VFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFL 279
            +  ++ A+G    T             M    +    A+D    + + P    +  E+ 
Sbjct: 241 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF 300

Query: 280 AYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGR- 338
                KH L+I  D+S  A A R++S      PGR  +PG ++   + + ERA ++    
Sbjct: 301 RDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAF 359

Query: 339 -GGSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMK 397
            GGS+T +P++     D++  IP     IT+GQI+++ +L  + I P INV  S+SR+  
Sbjct: 360 GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGS 419

Query: 398 SA 399
           +A
Sbjct: 420 AA 421


>gi|19913424 ATPase, H+ transporting, lysosomal V1 subunit A [Homo
           sapiens]
          Length = 617

 Score = 82.4 bits (202), Expect = 9e-16
 Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 9/229 (3%)

Query: 241 DFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEA 300
           D +    M    L  N +N P   R  +    +T +E+       HV ++    S +AEA
Sbjct: 299 DGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFR-DMGYHVSMMADSTSRWAEA 357

Query: 301 LREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE-----GRGGSITQIPILTMPNDDI 355
           LRE+S    E+P   G+P Y+   LA+ YERAGRV+      R GS++ +  ++ P  D 
Sbjct: 358 LREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDF 417

Query: 356 THPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTR--KDHGDVS 413
           + P+   T  I +    +D++L  R+ +P +N L S S+ M+ A+ E   +   +   + 
Sbjct: 418 SDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMR-ALDEYYDKHFTEFVPLR 476

Query: 414 NQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPY 462
            +        +D+  +  +VG+ +L   D + LE  +  + +F+ Q  Y
Sbjct: 477 TKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGY 525



 Score = 38.9 bits (89), Expect = 0.011
 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%)

Query: 40  TYRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGI 99
           T+  V  V+GP+V    +  A   E+V       ++  G+++ + G  A +QV+E TSG+
Sbjct: 17  TFGYVHGVSGPVVTACDMAGAAMYELVRV---GHSELVGEIIRLEGDMATIQVYEETSGV 73

Query: 100 DARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPI 133
                    TG  L   +   ++G +F+G  +P+
Sbjct: 74  SVGDPVLR-TGKPLSVELGPGIMGAIFDGIQRPL 106


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 16/106 (15%)

Query: 154 PHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSK-- 211
           PH+RI      Q  ++P+         Q +P+   A LP  +  + +  QA   +K+K  
Sbjct: 771 PHNRIMLTTPQQIQLNPL---------QPVPVVKPAVLPGTKALSAVSAQAAAAQKNKLK 821

Query: 212 -----AVLDYHDDNFAIVFAAMGVNMETARFFKSDFEQNGTMGNVC 252
                +  D  D N     A + ++ E+AR   ++ E  GT+   C
Sbjct: 822 EPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSC 867


>gi|54792082 phosphoinositide-3-kinase, catalytic, alpha polypeptide
           [Homo sapiens]
          Length = 1068

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 19/120 (15%)

Query: 79  QVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPV 138
           +V+E  G +   ++     G       CEF  D+++ P  +D    + N   + +D    
Sbjct: 100 KVIEPVGNRE-EKILNREIGFAIGMPVCEF--DMVKDPEVQDFRRNILNVCKEAVD---- 152

Query: 139 VMAEDFLDINGQPINPHSR---IYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNE 195
                  D+N    +PHSR   +YP  +  +   P  + N + +GQ I +      P+N+
Sbjct: 153 -----LRDLN----SPHSRAMYVYPPNVESSPELPKHIYNKLDKGQIIVVIWVIVSPNND 203


>gi|38788260 bromodomain PHD finger transcription factor isoform 2
            [Homo sapiens]
          Length = 2903

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 13/37 (35%), Positives = 21/37 (56%)

Query: 140  MAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNS 176
            ++ DF+D NG PIN +  +  E   +T I+ +  M S
Sbjct: 1683 LSNDFIDENGLPINKNENVNGESKRKTVITEVTTMTS 1719


>gi|38788274 bromodomain PHD finger transcription factor isoform 1
            [Homo sapiens]
          Length = 2920

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 13/37 (35%), Positives = 21/37 (56%)

Query: 140  MAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNS 176
            ++ DF+D NG PIN +  +  E   +T I+ +  M S
Sbjct: 1557 LSNDFIDENGLPINKNENVNGESKRKTVITEVTTMTS 1593


>gi|148727368 bromodomain and PHD finger containing, 3 [Homo sapiens]
          Length = 1205

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 461  PYENRSVFESLDLGWKLLRIFPKEMLKRIPQAVIDEFYSREGALQDLAP 509
            P+E+R   E L+L W   R +P       P  +ID    REG L +  P
Sbjct: 1067 PFEDRGDLEPLELVWAKCRGYPS-----YPALIIDPKMPREGLLHNGVP 1110


>gi|214010149 gamma-glutamyl carboxylase isoform 2 [Homo sapiens]
          Length = 701

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 259 NDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAARE---EVPGRR 315
           ND   +RI  PR+ +  A +  +Q    V  +L D+S +   L+E+ ++ +   EV    
Sbjct: 417 NDRFQQRIFDPRVDIVQAAWSPFQRTSWVQPLLMDLSPWRAKLQEIKSSLDNHTEVVFIA 476

Query: 316 GFPG 319
            FPG
Sbjct: 477 DFPG 480


>gi|21361163 gamma-glutamyl carboxylase isoform 1 [Homo sapiens]
          Length = 758

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 259 NDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAARE---EVPGRR 315
           ND   +RI  PR+ +  A +  +Q    V  +L D+S +   L+E+ ++ +   EV    
Sbjct: 474 NDRFQQRIFDPRVDIVQAAWSPFQRTSWVQPLLMDLSPWRAKLQEIKSSLDNHTEVVFIA 533

Query: 316 GFPG 319
            FPG
Sbjct: 534 DFPG 537


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,944,538
Number of Sequences: 37866
Number of extensions: 836284
Number of successful extensions: 1663
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1644
Number of HSP's gapped (non-prelim): 15
length of query: 513
length of database: 18,247,518
effective HSP length: 107
effective length of query: 406
effective length of database: 14,195,856
effective search space: 5763517536
effective search space used: 5763517536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.