Guide to the Human Genome
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Name: ATP5A1 Sequence: fasta or formatted (553aa) NCBI GI: 50345984
Description:

ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit precursor

Referenced in:

Oxidative Phosphorylation

Other entries for this name:
alt mRNA [553aa] ATP synthase, H+ transporting, mitochondrial F1 complex, alpha su...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         58           3
 C cysteine            0.4          2           1
 D aspartate           5.2         29           2
 E glutamate           5.6         31           2
 F phenylalanine       2.9         16           1
 G glycine             9.2         51           3
 H histidine           1.3          7           1
 I isoleucine          7.1         39           2
 K lysine              5.4         30           3
 L leucine             9.6         53           3
 M methionine          2.2         12           1
 N asparagine          2.9         16           1
 P proline             3.3         18           2
 Q glutamine           4.5         25           2
 R arginine            6.9         38           3
 S serine              7.1         39           2
 T threonine           4.9         27           1
 V valine              8.3         46           3
 W tryptophan          0.0          0           0
 Y tyrosine            2.9         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP synthase, H+ transporting, mitochondrial F1 comp... 
ATP5A1                1.000   ATP synthase, H+ transporting, mitochondrial F1 compl...
ATP5B                 0.075   mitochondrial ATP synthase beta subunit precursor [H...
ATP6V1B2              0.074   vacuolar H+ATPase B2 
ATP6V1B1              0.074   ATPase, H+ transporting, lysosomal 56/58kDa, V1 subu...
ATP6V1A               0.042   ATPase, H+ transporting, lysosomal V1 subunit A [Hom...
LOC100292713          0.009   PREDICTED: similar to AGAP002076-PA 
LOC100291037          0.009   PREDICTED: hypothetical protein XP_002347503 
LOC100287214          0.009   PREDICTED: hypothetical protein XP_002343322 
PLCH2                 0.007   phospholipase C, eta 2 
ABCF3                 0.006   ATP-binding cassette, sub-family F (GCN20), member ...
FAM81A                0.005   hypothetical protein LOC145773 
FIGNL1                0.005   fidgetin-like 1 
FIGNL1                0.005   fidgetin-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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