Guide to the Human Genome
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Name: GGCX Sequence: fasta or formatted (758aa) NCBI GI: 21361163
Description:

gamma-glutamyl carboxylase isoform 1

Referenced in:

Additional Protein Modifications
Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Other entries for this name:
alt prot [701aa] gamma-glutamyl carboxylase isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         34           2
 C cysteine            1.3         10           1
 D aspartate           4.4         33           1
 E glutamate           5.3         40           2
 F phenylalanine       5.8         44           2
 G glycine             5.7         43           2
 H histidine           2.5         19           1
 I isoleucine          2.9         22           1
 K lysine              3.6         27           2
 L leucine            15.0        114           3
 M methionine          2.4         18           2
 N asparagine          3.6         27           2
 P proline             6.1         46           2
 Q glutamine           4.9         37           2
 R arginine            6.5         49           3
 S serine              8.3         63           2
 T threonine           4.2         32           2
 V valine              6.2         47           2
 W tryptophan          2.4         18           1
 Y tyrosine            4.6         35           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-glutamyl carboxylase isoform 1 
GGCX                  0.910   gamma-glutamyl carboxylase isoform 2 
ANKRD45               0.007   ankyrin repeat domain 45 
ENAH                  0.007   enabled homolog isoform a 
ENAH                  0.007   enabled homolog isoform b 
DNAH9                 0.004   dynein, axonemal, heavy chain 9 isoform 2 
CEP110                0.004   centrosomal protein 110kDa 
AKAP8                 0.004   A-kinase anchor protein 8 
HNRNPUL1              0.003   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPUL1              0.003   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
RGL2                  0.003   ral guanine nucleotide dissociation stimulator-like 2...
OGT                   0.003   O-linked GlcNAc transferase isoform 2 
OGT                   0.003   O-linked GlcNAc transferase isoform 1 
INF2                  0.003   inverted formin 2 isoform 2 
INF2                  0.003   inverted formin 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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