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Search of human proteins with 19743859
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19743859 Fc alpha receptor isoform c precursor [Homo
sapiens]
(191 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19743859 Fc alpha receptor isoform c precursor [Homo sapiens] 390 e-109
gi|19743863 Fc alpha receptor isoform e [Homo sapiens] 358 1e-99
gi|19743871 Fc alpha receptor isoform i precursor [Homo sapiens] 248 2e-66
gi|19743857 Fc alpha receptor isoform b precursor [Homo sapiens] 248 2e-66
gi|4503673 Fc alpha receptor isoform a precursor [Homo sapiens] 248 2e-66
gi|19743869 Fc alpha receptor isoform h [Homo sapiens] 216 7e-57
gi|19743865 Fc alpha receptor isoform f [Homo sapiens] 216 7e-57
gi|19743861 Fc alpha receptor isoform d [Homo sapiens] 216 7e-57
gi|19743867 Fc alpha receptor isoform g [Homo sapiens] 181 3e-46
gi|143770741 glycoprotein VI (platelet) isoform 1 [Homo sapiens] 66 2e-11
gi|143770755 glycoprotein VI (platelet) isoform 2 [Homo sapiens] 66 2e-11
gi|110611910 leukocyte immunoglobulin-like receptor, subfamily A... 64 6e-11
gi|4504943 leukocyte-associated immunoglobulin-like receptor 1 i... 64 8e-11
gi|125661043 leukocyte immunoglobulin-like receptor, subfamily B... 64 8e-11
gi|125661045 leukocyte immunoglobulin-like receptor, subfamily B... 64 8e-11
gi|11231177 leukocyte-associated immunoglobulin-like receptor 1 ... 64 1e-10
gi|224586788 natural cytotoxicity triggering receptor 1 isoform ... 62 3e-10
gi|224586786 natural cytotoxicity triggering receptor 1 isoform ... 62 3e-10
gi|4758692 natural cytotoxicity triggering receptor 1 isoform a ... 62 3e-10
gi|195972797 leukocyte immunoglobulin-like receptor, subfamily A... 60 1e-09
gi|5803068 leukocyte immunoglobulin-like receptor, subfamily A (... 60 1e-09
gi|10947101 leukocyte-associated immunoglobulin-like receptor 2 ... 60 1e-09
gi|125987588 leukocyte immunoglobulin-like receptor, subfamily B... 59 2e-09
gi|125987585 leukocyte immunoglobulin-like receptor, subfamily B... 59 2e-09
gi|10947103 leukocyte-associated immunoglobulin-like receptor 2 ... 59 3e-09
gi|145580634 V-set and transmembrane domain containing 1 precurs... 58 6e-09
gi|208879429 hypothetical LOC441864 [Homo sapiens] 55 5e-08
gi|47519953 leukocyte immunoglobulin-like receptor subfamily A m... 55 5e-08
gi|19557668 osteoclast-associated receptor isoform 4 [Homo sapiens] 54 1e-07
gi|19557664 osteoclast-associated receptor isoform 5 [Homo sapiens] 54 1e-07
>gi|19743859 Fc alpha receptor isoform c precursor [Homo sapiens]
Length = 191
Score = 390 bits (1003), Expect = e-109
Identities = 191/191 (100%), Positives = 191/191 (100%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
Sbjct: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
Sbjct: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
Query: 121 DSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPG 180
DSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPG
Sbjct: 121 DSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPG 180
Query: 181 LTFARTPSVCK 191
LTFARTPSVCK
Sbjct: 181 LTFARTPSVCK 191
>gi|19743863 Fc alpha receptor isoform e [Homo sapiens]
Length = 179
Score = 358 bits (920), Expect = 1e-99
Identities = 179/191 (93%), Positives = 179/191 (93%), Gaps = 12/191 (6%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
MDPKQTTLLCL GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
Sbjct: 1 MDPKQTTLLCL------------GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 48
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
Sbjct: 49 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 108
Query: 121 DSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPG 180
DSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPG
Sbjct: 109 DSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPG 168
Query: 181 LTFARTPSVCK 191
LTFARTPSVCK
Sbjct: 169 LTFARTPSVCK 179
>gi|19743871 Fc alpha receptor isoform i precursor [Homo sapiens]
Length = 239
Score = 248 bits (634), Expect = 2e-66
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
Sbjct: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
Sbjct: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
>gi|19743857 Fc alpha receptor isoform b precursor [Homo sapiens]
Length = 265
Score = 248 bits (634), Expect = 2e-66
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
Sbjct: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
Sbjct: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
Score = 149 bits (377), Expect = 1e-36
Identities = 87/168 (51%), Positives = 102/168 (60%), Gaps = 23/168 (13%)
Query: 24 GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFWNETDP 83
G + PF+SA V+ ++ + C + + + + K E+ E
Sbjct: 121 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPF-DRFSLAKEG---ELSLPQHQSGEHPA 176
Query: 84 EFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTDSIHQDYTTQNLIRMAVAGLVLV 143
F + +D N +G Y+C DSIHQDYTTQNLIRMAVAGLVLV
Sbjct: 177 NFSLGPVDLNVSGIYRCY-------------------DSIHQDYTTQNLIRMAVAGLVLV 217
Query: 144 ALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK 191
ALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
Sbjct: 218 ALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK 265
>gi|4503673 Fc alpha receptor isoform a precursor [Homo sapiens]
Length = 287
Score = 248 bits (634), Expect = 2e-66
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
Sbjct: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
Sbjct: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
Score = 167 bits (423), Expect = 5e-42
Identities = 96/171 (56%), Positives = 114/171 (66%), Gaps = 7/171 (4%)
Query: 24 GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFWNETDP 83
G + PF+SA V+ ++ + C + + + + K E+ E
Sbjct: 121 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPF-DRFSLAKEG---ELSLPQHQSGEHPA 176
Query: 84 EFVIDHMDANKAGRYQCQ--YRIGHYRFRY-SDTLELVVTDSIHQDYTTQNLIRMAVAGL 140
F + +D N +G Y+C Y Y + + S+ LELVVTDSIHQDYTTQNLIRMAVAGL
Sbjct: 177 NFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGL 236
Query: 141 VLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK 191
VLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
Sbjct: 237 VLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK 287
>gi|19743869 Fc alpha receptor isoform h [Homo sapiens]
Length = 253
Score = 216 bits (551), Expect = 7e-57
Identities = 108/120 (90%), Positives = 108/120 (90%), Gaps = 12/120 (10%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
MDPKQTTLLCL GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
Sbjct: 1 MDPKQTTLLCL------------GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 48
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
Sbjct: 49 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 108
Score = 149 bits (377), Expect = 1e-36
Identities = 87/168 (51%), Positives = 102/168 (60%), Gaps = 23/168 (13%)
Query: 24 GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFWNETDP 83
G + PF+SA V+ ++ + C + + + + K E+ E
Sbjct: 109 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPF-DRFSLAKEG---ELSLPQHQSGEHPA 164
Query: 84 EFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTDSIHQDYTTQNLIRMAVAGLVLV 143
F + +D N +G Y+C DSIHQDYTTQNLIRMAVAGLVLV
Sbjct: 165 NFSLGPVDLNVSGIYRCY-------------------DSIHQDYTTQNLIRMAVAGLVLV 205
Query: 144 ALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK 191
ALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
Sbjct: 206 ALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK 253
>gi|19743865 Fc alpha receptor isoform f [Homo sapiens]
Length = 209
Score = 216 bits (551), Expect = 7e-57
Identities = 108/120 (90%), Positives = 108/120 (90%), Gaps = 12/120 (10%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
MDPKQTTLLCL GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
Sbjct: 1 MDPKQTTLLCL------------GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 48
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
Sbjct: 49 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 108
>gi|19743861 Fc alpha receptor isoform d [Homo sapiens]
Length = 275
Score = 216 bits (551), Expect = 7e-57
Identities = 108/120 (90%), Positives = 108/120 (90%), Gaps = 12/120 (10%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
MDPKQTTLLCL GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
Sbjct: 1 MDPKQTTLLCL------------GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 48
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
Sbjct: 49 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 108
Score = 167 bits (423), Expect = 5e-42
Identities = 96/171 (56%), Positives = 114/171 (66%), Gaps = 7/171 (4%)
Query: 24 GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFWNETDP 83
G + PF+SA V+ ++ + C + + + + K E+ E
Sbjct: 109 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPF-DRFSLAKEG---ELSLPQHQSGEHPA 164
Query: 84 EFVIDHMDANKAGRYQCQ--YRIGHYRFRY-SDTLELVVTDSIHQDYTTQNLIRMAVAGL 140
F + +D N +G Y+C Y Y + + S+ LELVVTDSIHQDYTTQNLIRMAVAGL
Sbjct: 165 NFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGL 224
Query: 141 VLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK 191
VLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
Sbjct: 225 VLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK 275
>gi|19743867 Fc alpha receptor isoform g [Homo sapiens]
Length = 178
Score = 181 bits (459), Expect = 3e-46
Identities = 107/194 (55%), Positives = 125/194 (64%), Gaps = 19/194 (9%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
MDPKQTTLLCL G + PF+SA V+ ++ + C + + +
Sbjct: 1 MDPKQTTLLCL------------GLYGKPFLSADRGLVLMPGENISLTCSSAHIPF-DRF 47
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQ--YRIGHYRFRY-SDTLEL 117
+ K E+ E F + +D N +G Y+C Y Y + + S+ LEL
Sbjct: 48 SLAKEG---ELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALEL 104
Query: 118 VVTDSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMC 177
VVTDSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMC
Sbjct: 105 VVTDSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMC 164
Query: 178 QPGLTFARTPSVCK 191
QPGLTFARTPSVCK
Sbjct: 165 QPGLTFARTPSVCK 178
>gi|143770741 glycoprotein VI (platelet) isoform 1 [Homo sapiens]
Length = 620
Score = 66.2 bits (160), Expect = 2e-11
Identities = 43/120 (35%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M P T L CL LCLG R+ AQ G P P + A S ++PL+ V ++CQ L +L
Sbjct: 1 MSPSPTALFCLGLCLG-RVPAQSGPLPKPSLQALPSSLVPLEKPVTLRCQGPPGVDLYRL 59
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
+ +S Y++ I M + AGRY+C Y+ G SD LELV T
Sbjct: 60 EKLSSSRYQD-----------QAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVAT 108
>gi|143770755 glycoprotein VI (platelet) isoform 2 [Homo sapiens]
Length = 339
Score = 66.2 bits (160), Expect = 2e-11
Identities = 43/120 (35%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M P T L CL LCLG R+ AQ G P P + A S ++PL+ V ++CQ L +L
Sbjct: 1 MSPSPTALFCLGLCLG-RVPAQSGPLPKPSLQALPSSLVPLEKPVTLRCQGPPGVDLYRL 59
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
+ +S Y++ I M + AGRY+C Y+ G SD LELV T
Sbjct: 60 EKLSSSRYQD-----------QAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVAT 108
Score = 34.7 bits (78), Expect = 0.051
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 125 QDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEP 170
Q YT NL+R+ + ++L+ L L E+WHS + V P
Sbjct: 263 QYYTKGNLVRICLGAVILIILAGFLAEDWHSRRKRLRHRGRAVQRP 308
>gi|110611910 leukocyte immunoglobulin-like receptor, subfamily A,
member 6 [Homo sapiens]
Length = 481
Score = 64.3 bits (155), Expect = 6e-11
Identities = 59/180 (32%), Positives = 74/180 (41%), Gaps = 4/180 (2%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M P T LLCL L LG R + Q G FP P + A+ VI V I CQ EA QL
Sbjct: 1 MTPALTALLCLGLSLGPRTRVQAGPFPKPTLWAEPGSVISWGSPVTIWCQGSLEAQEYQL 60
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
K + + R + F I M + AGRY+C Y SD LELV+T
Sbjct: 61 --DKEGSPEPLDRNNPLEPKNKARFSIPSMTQHHAGRYRCHYYSSAGWSEPSDPLELVMT 118
Query: 121 DSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPG 180
+ T L VA + L + +H H L KE + SQQ+ G
Sbjct: 119 -GFYNKPTLSALPSPVVASGGNMTLRCGSQKGYH-HFVLMKEGEHQLPRTLDSQQLHSGG 176
Score = 45.8 bits (107), Expect = 2e-05
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 22/146 (15%)
Query: 31 ISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFW-NETDPEFVIDH 89
+SA+ P + +V + CQ+ R + T L+ + + + + R + ++ EF +
Sbjct: 327 LSAQPGPTVASGENVTLLCQS-RGYFDTFLLTKEGAAHPPLRLRSMYGAHKYQAEFPMSP 385
Query: 90 MDANKAGRYQC--QYRIGHYRFRY-SDTLELVV----------------TDSIH-QDYTT 129
+ + AG Y+C Y + + S+ LEL+V T + H +DYT
Sbjct: 386 VTSAHAGTYRCYGSYSSNPHLLSFPSEPLELMVSGHSGGSSLPPTGPPSTPASHAKDYTV 445
Query: 130 QNLIRMAVAGLVLVALLAILVENWHS 155
+NLIRM +AGLVLV L +L E HS
Sbjct: 446 ENLIRMGMAGLVLVFLGILLFEAQHS 471
>gi|4504943 leukocyte-associated immunoglobulin-like receptor 1
isoform a precursor [Homo sapiens]
Length = 287
Score = 63.9 bits (154), Expect = 8e-11
Identities = 45/123 (36%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M P T LL LVLCL Q I QE D P P ISA+ VIPL V C+ +L
Sbjct: 1 MSPHPTALLGLVLCLAQTIHTQEEDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRL 60
Query: 61 MIIKNSTYREIGRRLKFW-NETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVV 119
STY + + +E++ F ID + AG Y+C Y SD LEL+V
Sbjct: 61 ERESRSTYNDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKPPKWSEQSDYLELLV 120
Query: 120 TDS 122
++
Sbjct: 121 KET 123
>gi|125661043 leukocyte immunoglobulin-like receptor, subfamily B,
member 3 isoform 1 [Homo sapiens]
Length = 632
Score = 63.9 bits (154), Expect = 8e-11
Identities = 56/180 (31%), Positives = 76/180 (42%), Gaps = 4/180 (2%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M P T LLCL L LG R + Q G FP P + A+ VI V I CQ +EA +
Sbjct: 1 MTPALTALLCLGLSLGPRTRVQAGPFPKPTLWAEPGSVISWGSPVTIWCQGSQEA--QEY 58
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
+ K + + R + F I M + AGRY+C Y SD LE+V+T
Sbjct: 59 RLHKEGSPEPLDRNNPLEPKNKARFSIPSMTEHHAGRYRCHYYSSAGWSEPSDPLEMVMT 118
Query: 121 DSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPG 180
+ + T L VA + L + +H H L KE + SQQ+ G
Sbjct: 119 GA-YSKPTLSALPSPVVASGGNMTLRCGSQKGYH-HFVLMKEGEHQLPRTLDSQQLHSRG 176
>gi|125661045 leukocyte immunoglobulin-like receptor, subfamily B,
member 3 isoform 2 [Homo sapiens]
Length = 631
Score = 63.9 bits (154), Expect = 8e-11
Identities = 56/180 (31%), Positives = 76/180 (42%), Gaps = 4/180 (2%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M P T LLCL L LG R + Q G FP P + A+ VI V I CQ +EA +
Sbjct: 1 MTPALTALLCLGLSLGPRTRVQAGPFPKPTLWAEPGSVISWGSPVTIWCQGSQEA--QEY 58
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
+ K + + R + F I M + AGRY+C Y SD LE+V+T
Sbjct: 59 RLHKEGSPEPLDRNNPLEPKNKARFSIPSMTEHHAGRYRCHYYSSAGWSEPSDPLEMVMT 118
Query: 121 DSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPG 180
+ + T L VA + L + +H H L KE + SQQ+ G
Sbjct: 119 GA-YSKPTLSALPSPVVASGGNMTLRCGSQKGYH-HFVLMKEGEHQLPRTLDSQQLHSRG 176
>gi|11231177 leukocyte-associated immunoglobulin-like receptor 1
isoform b precursor [Homo sapiens]
Length = 270
Score = 63.5 bits (153), Expect = 1e-10
Identities = 58/191 (30%), Positives = 82/191 (42%), Gaps = 16/191 (8%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M P T LL LVLCL Q I QE D P P ISA+ VIPL V C+ +L
Sbjct: 1 MSPHPTALLGLVLCLAQTIHTQEEDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRL 60
Query: 61 MIIKNSTYREIGRRLKFW-NETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVV 119
STY + + +E++ F ID + AG Y+C Y SD LEL+V
Sbjct: 61 ERESRSTYNDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKPPKWSEQSDYLELLV 120
Query: 120 -------TDSIHQDY--TTQNL------IRMAVAGLVLVALLAILVENWHSHTALNKEAS 164
+D+ H ++ +Q L I + V+ + L LL +++ H + +
Sbjct: 121 KGPTQRPSDNSHNEHAPASQGLKAEHLYILIGVSVVFLFCLLLLVLFCLHRQNQIKQGPP 180
Query: 165 ADVAEPSWSQQ 175
E QQ
Sbjct: 181 RSKDEEQKPQQ 191
>gi|224586788 natural cytotoxicity triggering receptor 1 isoform c
[Homo sapiens]
Length = 287
Score = 62.0 bits (149), Expect = 3e-10
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 8 LLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNST 67
LLC+ LCL QRI AQ+ P PFI A+ ++P + V I CQ A QL +
Sbjct: 8 LLCVGLCLSQRISAQQQTLPKPFIWAEPHFMVPKEKQVTICCQGNYGAVEYQLHF--EGS 65
Query: 68 YREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTD 121
+ R +F I M++ AG+Y C YR+G S+ L+LVVT+
Sbjct: 66 LFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTE 119
Score = 47.4 bits (111), Expect = 8e-06
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 22/156 (14%)
Query: 26 FPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFWNETDPEF 85
+ P +S P + V C+ + + +++K + R + + EF
Sbjct: 121 YDTPTLSVHPGPEVISGEKVTFYCRL--DTATSMFLLLKEGRSSHVQRG---YGKVQAEF 175
Query: 86 VIDHMDANKAGRYQCQYRIGHYRFRY-SDTLELVVTDSIHQ----------------DYT 128
+ + G Y+C ++ + + S+ ++L+VT I D+T
Sbjct: 176 PLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENTSLAPEDPTFPDHALWDHT 235
Query: 129 TQNLIRMAVAGLVLVALLAILVENWHSHTALNKEAS 164
QNL+RM +A LVLVAL+ LVE+W S + AS
Sbjct: 236 AQNLLRMGLAFLVLVALVWFLVEDWLSRKRTRERAS 271
>gi|224586786 natural cytotoxicity triggering receptor 1 isoform b
[Homo sapiens]
Length = 303
Score = 62.0 bits (149), Expect = 3e-10
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 8 LLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNST 67
LLC+ LCL QRI AQ+ P PFI A+ ++P + V I CQ A QL +
Sbjct: 8 LLCVGLCLSQRISAQQQTLPKPFIWAEPHFMVPKEKQVTICCQGNYGAVEYQLHF--EGS 65
Query: 68 YREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTD 121
+ R +F I M++ AG+Y C YR+G S+ L+LVVT+
Sbjct: 66 LFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTE 119
Score = 41.6 bits (96), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 126 DYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEAS 164
D+T QNL+RM +A LVLVAL+ LVE+W S + AS
Sbjct: 249 DHTAQNLLRMGLAFLVLVALVWFLVEDWLSRKRTRERAS 287
>gi|4758692 natural cytotoxicity triggering receptor 1 isoform a
[Homo sapiens]
Length = 304
Score = 62.0 bits (149), Expect = 3e-10
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 8 LLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNST 67
LLC+ LCL QRI AQ+ P PFI A+ ++P + V I CQ A QL +
Sbjct: 8 LLCVGLCLSQRISAQQQTLPKPFIWAEPHFMVPKEKQVTICCQGNYGAVEYQLHF--EGS 65
Query: 68 YREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTD 121
+ R +F I M++ AG+Y C YR+G S+ L+LVVT+
Sbjct: 66 LFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTE 119
Score = 41.6 bits (96), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 126 DYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEAS 164
D+T QNL+RM +A LVLVAL+ LVE+W S + AS
Sbjct: 250 DHTAQNLLRMGLAFLVLVALVWFLVEDWLSRKRTRERAS 288
>gi|195972797 leukocyte immunoglobulin-like receptor, subfamily A
(with TM domain), member 2 isoform a [Homo sapiens]
Length = 483
Score = 60.1 bits (144), Expect = 1e-09
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M P T L+CL L LG R Q G P P + A+ VI V ++CQ +A +
Sbjct: 1 MTPILTVLICLGLSLGPRTHVQAGHLPKPTLWAEPGSVIIQGSPVTLRCQGSLQA--EEY 58
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
+ + + RR++ + + +F I + AGRY CQY ++ YSD LELVVT
Sbjct: 59 HLYRENKSASWVRRIQEPGK-NGQFPIPSITWEHAGRYHCQYYSHNHSSEYSDPLELVVT 117
Score = 51.6 bits (122), Expect = 4e-07
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 25/162 (15%)
Query: 26 FPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFW-NETDPE 84
+ P +S + P + +V + CQ+ R + T L+ + + + + R + + E
Sbjct: 321 YDRPSLSVQPVPTVAPGKNVTLLCQS-RGQFHTFLLTKEGAGHPPLHLRSEHQAQQNQAE 379
Query: 85 FVIDHMDANKAGRYQCQYRIGHYRFRYS---DTLELVVTDSIH----------------- 124
F + + + G Y+C + + S D LELVV+++
Sbjct: 380 FRMGPVTSAHVGTYRCYSSLSSNPYLLSLPSDPLELVVSEAAETLSPSQNKTDSTTTSLG 439
Query: 125 ---QDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEA 163
QDYT +NLIRM VAGLVLV L +L E HS +L A
Sbjct: 440 QHPQDYTVENLIRMGVAGLVLVVLGILLFEAQHSQRSLQDAA 481
Score = 28.9 bits (63), Expect = 2.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 24 GDFPMPFISAKSSPVIPLDGSVKIQC 49
G + P +SA SPV+ L G+V +QC
Sbjct: 118 GAYSKPTLSALPSPVVTLGGNVTLQC 143
>gi|5803068 leukocyte immunoglobulin-like receptor, subfamily A
(with TM domain), member 2 isoform b [Homo sapiens]
Length = 466
Score = 60.1 bits (144), Expect = 1e-09
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M P T L+CL L LG R Q G P P + A+ VI V ++CQ +A +
Sbjct: 1 MTPILTVLICLGLSLGPRTHVQAGHLPKPTLWAEPGSVIIQGSPVTLRCQGSLQA--EEY 58
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
+ + + RR++ + + +F I + AGRY CQY ++ YSD LELVVT
Sbjct: 59 HLYRENKSASWVRRIQEPGK-NGQFPIPSITWEHAGRYHCQYYSHNHSSEYSDPLELVVT 117
Score = 58.2 bits (139), Expect = 4e-09
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 26 FPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFW-NETDPE 84
+ P +S + P + +V + CQ+ R + T L+ + + + + R + + E
Sbjct: 321 YDRPSLSVQPVPTVAPGKNVTLLCQS-RGQFHTFLLTKEGAGHPPLHLRSEHQAQQNQAE 379
Query: 85 FVIDHMDANKAGRYQCQYRIGHYRFRYS---DTLELVVTDSIHQ---DYTTQNLIRMAVA 138
F + + + G Y+C + + S D LELVV+ S+ Q DYT +NLIRM VA
Sbjct: 380 FRMGPVTSAHVGTYRCYSSLSSNPYLLSLPSDPLELVVSASLGQHPQDYTVENLIRMGVA 439
Query: 139 GLVLVALLAILVENWHSHTALNKEA 163
GLVLV L +L E HS +L A
Sbjct: 440 GLVLVVLGILLFEAQHSQRSLQDAA 464
Score = 28.9 bits (63), Expect = 2.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 24 GDFPMPFISAKSSPVIPLDGSVKIQC 49
G + P +SA SPV+ L G+V +QC
Sbjct: 118 GAYSKPTLSALPSPVVTLGGNVTLQC 143
>gi|10947101 leukocyte-associated immunoglobulin-like receptor 2
isoform a [Homo sapiens]
Length = 152
Score = 60.1 bits (144), Expect = 1e-09
Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M P T LL LVLCL Q I QEG P P ISA+ VI V C+ +L
Sbjct: 1 MSPHLTALLGLVLCLAQTIHTQEGALPRPSISAEPGTVISPGSHVTFMCRGPVGVQTFRL 60
Query: 61 MIIKNSTYREIGRRLKFW-NETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVV 119
+ Y++ + +E++ F ID + AG Y+C Y +SD LEL+V
Sbjct: 61 EREDRAKYKDSYNVFRLGPSESEARFHIDSVSEGNAGLYRCLYYKPPGWSEHSDFLELLV 120
Query: 120 TDS 122
+S
Sbjct: 121 KES 123
>gi|125987588 leukocyte immunoglobulin-like receptor, subfamily B,
member 4 isoform 2 [Homo sapiens]
Length = 447
Score = 59.3 bits (142), Expect = 2e-09
Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M P T LLCL L LG R Q G P P + A+ VI SV I CQ EA +
Sbjct: 1 MIPTFTALLCLGLSLGPRTHMQAGPLPKPTLWAEPGSVISWGNSVTIWCQGTLEA--REY 58
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
+ K + R+ + F I M + AGRY+C YR + SD LELV+T
Sbjct: 59 RLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMT 118
Score = 35.4 bits (80), Expect = 0.030
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 24 GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFW-NETD 82
G + P +SA SP++ SV + CQ+ R T L+I + + + + R + +
Sbjct: 119 GAYSKPTLSALPSPLVTSGKSVTLLCQS-RSPMDTFLLIKERAAHPLLHLRSEHGAQQHQ 177
Query: 83 PEFVIDHMDANKAGRYQC--QYRIGHYRFRY-SDTLELVVTDSI 123
EF + + + G Y+C + HY + SD LEL+V+ S+
Sbjct: 178 AEFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVSGSL 221
>gi|125987585 leukocyte immunoglobulin-like receptor, subfamily B,
member 4 isoform 1 [Homo sapiens]
Length = 448
Score = 59.3 bits (142), Expect = 2e-09
Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M P T LLCL L LG R Q G P P + A+ VI SV I CQ EA +
Sbjct: 1 MIPTFTALLCLGLSLGPRTHMQAGPLPKPTLWAEPGSVISWGNSVTIWCQGTLEA--REY 58
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
+ K + R+ + F I M + AGRY+C YR + SD LELV+T
Sbjct: 59 RLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMT 118
Score = 35.4 bits (80), Expect = 0.030
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 24 GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFW-NETD 82
G + P +SA SP++ SV + CQ+ R T L+I + + + + R + +
Sbjct: 119 GAYSKPTLSALPSPLVTSGKSVTLLCQS-RSPMDTFLLIKERAAHPLLHLRSEHGAQQHQ 177
Query: 83 PEFVIDHMDANKAGRYQC--QYRIGHYRFRY-SDTLELVVTDSI 123
EF + + + G Y+C + HY + SD LEL+V+ S+
Sbjct: 178 AEFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVSGSL 221
>gi|10947103 leukocyte-associated immunoglobulin-like receptor 2
isoform b [Homo sapiens]
Length = 135
Score = 58.9 bits (141), Expect = 3e-09
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M P T LL LVLCL Q I QEG P P ISA+ VI V C+ +L
Sbjct: 1 MSPHLTALLGLVLCLAQTIHTQEGALPRPSISAEPGTVISPGSHVTFMCRGPVGVQTFRL 60
Query: 61 MIIKNSTYREIGRRLKFW-NETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVV 119
+ Y++ + +E++ F ID + AG Y+C Y +SD LEL+V
Sbjct: 61 EREDRAKYKDSYNVFRLGPSESEARFHIDSVSEGNAGLYRCLYYKPPGWSEHSDFLELLV 120
Query: 120 TDSI 123
++
Sbjct: 121 KGTV 124
>gi|145580634 V-set and transmembrane domain containing 1 precursor
[Homo sapiens]
Length = 236
Score = 57.8 bits (138), Expect = 6e-09
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 14/179 (7%)
Query: 7 TLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNS 66
+LLCL LCLG + + P P + A S V+ + +V ++CQA + L + +S
Sbjct: 7 SLLCLGLCLGYEDEKKNEKPPKPSLHAWPSSVVEAESNVTLKCQAHSQNVTFVLRKVNDS 66
Query: 67 TYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYR--IGHYRFRYSDTLELVVTD--- 121
Y++ E + EF + AGRY C Y+ H S+ L+LVVTD
Sbjct: 67 GYKQEQSSA----ENEAEFPFTDLKPKDAGRYFCAYKTTASHEWSESSEHLQLVVTDKHD 122
Query: 122 -----SIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQ 175
S+ D T + + ++L+ L ++ H++ ++E++ + +Q
Sbjct: 123 ELEAPSMKTDTRTIFVAIFSCISILLLFLSVFIIYRCSQHSSSSEESTKRTSHSKLPEQ 181
>gi|208879429 hypothetical LOC441864 [Homo sapiens]
Length = 271
Score = 54.7 bits (130), Expect = 5e-08
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 1 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL 60
M PK +LLC LC+GQ +G P P +SA S V+P + +V ++C A
Sbjct: 1 MIPKLLSLLCFRLCVGQGDTRGDGSLPKPSLSAWPSSVVPANSNVTLRCWT--PARGVSF 58
Query: 61 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQY---RIGHYRFRYSDTLEL 117
++ K E + L E EF ++++ AG Y C+Y H + SD L L
Sbjct: 59 VLRKGGIILESPKPLDS-TEGAAEFHLNNLKVRNAGEYTCEYYRKASPHILSQRSDVLLL 117
Query: 118 VVTDSIHQDY 127
+VT + + +
Sbjct: 118 LVTGHLSKPF 127
Score = 52.4 bits (124), Expect = 2e-07
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 24 GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLM-IIKNSTYREIGRRLKFWNETD 82
G PF+ + G V +QCQ + ++ + ++K T I + E D
Sbjct: 121 GHLSKPFLRTYQRGTVTAGGRVTLQCQKRDQLFVPIMFALLKAGTPSPIQLQSPAGKEID 180
Query: 83 PEFVIDHMDANKAGRYQCQY---RIGHYRFRYSDTLELVVT---DSIHQDYTTQNLIRMA 136
F + + A AG Y C Y + + SD LE++VT + +Y+ N +R+
Sbjct: 181 --FSLVDVTAGDAGNYSCMYYQTKSPFWASEPSDQLEILVTVPPGTTSSNYSLGNFVRLG 238
Query: 137 VAGLVLVALLAILVENWHSHTALNKEASA 165
+A +++V + A LVE W+S E+ A
Sbjct: 239 LAAVIVVIMGAFLVEAWYSRNVSPGESEA 267
>gi|47519953 leukocyte immunoglobulin-like receptor subfamily A
member 4 [Homo sapiens]
Length = 499
Score = 54.7 bits (130), Expect = 5e-08
Identities = 43/115 (37%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 6 TTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKN 65
T+LL L LG R + Q + P P + A+ PVI V I CQ EA +L N
Sbjct: 6 TSLLFFGLSLGPRTRVQAENLPKPILWAEPGPVITWHNPVTIWCQGTLEAQGYRLDKEGN 65
Query: 66 STYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 120
S R I + L+ +E + I M AGRY C Y+ SD LELVVT
Sbjct: 66 SMSRHILKTLE--SENKVKLSIPSMMWEHAGRYHCYYQSPAGWSEPSDPLELVVT 118
Score = 47.0 bits (110), Expect = 1e-05
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 30/152 (19%)
Query: 29 PFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFW-NETDPEFVI 87
P +S + P + V + CQ+ + T L+ + + + + R + ++ EF +
Sbjct: 324 PSLSVQPGPTVTSGEKVTLLCQSW-DPMFTFLLTKEGAAHPPLRLRSMYGAHKYQAEFPM 382
Query: 88 DHMDANKAGRYQCQ-------YRIGHYRFRYSDTLELVVTDSIH---------------- 124
+ + AG Y+C Y + H S+ LELVV+ +
Sbjct: 383 SPVTSAHAGTYRCYGSRSSNPYLLSHP----SEPLELVVSGATETLNPAQKKSDSKTAPH 438
Query: 125 -QDYTTQNLIRMAVAGLVLVALLAILVENWHS 155
QDYT +NLIRM VAGLVL+ L +L E HS
Sbjct: 439 LQDYTVENLIRMGVAGLVLLFLGILLFEAQHS 470
>gi|19557668 osteoclast-associated receptor isoform 4 [Homo sapiens]
Length = 263
Score = 53.5 bits (127), Expect = 1e-07
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 25 DFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYRE-IGRRLKFWNETDP 83
+ P P + A PV+ +V ++C +L + YRE + L++ + P
Sbjct: 126 ELPRPSLVALPGPVVGPGANVSLRCAG-------RLRNMSFVLYREGVAAPLQYRHSAQP 178
Query: 84 EFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT---DSIHQDYTTQNLIRMAVAGL 140
+ A G Y C Y + S E++V DS DYT NL+R+ +AGL
Sbjct: 179 WADFTLLGARAPGTYSCYYHTPSAPYVLSQRSEVLVISWEDSGSSDYTRGNLVRLGLAGL 238
Query: 141 VLVALLAILVENWHS 155
VL++L A++ +W S
Sbjct: 239 VLISLGALVTFDWRS 253
Score = 32.3 bits (72), Expect = 0.25
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 27 PMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLM---IIKNSTYREIGRRLKFWNETDP 83
P P++ A+ + V+ +V ++C+A + A+ L I +R++ L
Sbjct: 31 PKPWLGAQPATVVTPGVNVTLRCRAPQPAWRFGLFKPGEIAPLLFRDVSSEL-------A 83
Query: 84 EFVIDHMDANKAGRYQCQYRIGHYR----FRYSDTLELVVTDSI 123
EF ++ + + G Y+C YR + + SD LEL+VT+ +
Sbjct: 84 EFFLEEVTPAQGGIYRCCYRRPDWGPGVWSQPSDVLELLVTEEL 127
>gi|19557664 osteoclast-associated receptor isoform 5 [Homo sapiens]
Length = 252
Score = 53.5 bits (127), Expect = 1e-07
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 25 DFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYRE-IGRRLKFWNETDP 83
+ P P + A PV+ +V ++C +L + YRE + L++ + P
Sbjct: 115 ELPRPSLVALPGPVVGPGANVSLRCAG-------RLRNMSFVLYREGVAAPLQYRHSAQP 167
Query: 84 EFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT---DSIHQDYTTQNLIRMAVAGL 140
+ A G Y C Y + S E++V DS DYT NL+R+ +AGL
Sbjct: 168 WADFTLLGARAPGTYSCYYHTPSAPYVLSQRSEVLVISWEDSGSSDYTRGNLVRLGLAGL 227
Query: 141 VLVALLAILVENWHS 155
VL++L A++ +W S
Sbjct: 228 VLISLGALVTFDWRS 242
Score = 32.3 bits (72), Expect = 0.25
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 27 PMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLM---IIKNSTYREIGRRLKFWNETDP 83
P P++ A+ + V+ +V ++C+A + A+ L I +R++ L
Sbjct: 20 PKPWLGAQPATVVTPGVNVTLRCRAPQPAWRFGLFKPGEIAPLLFRDVSSEL-------A 72
Query: 84 EFVIDHMDANKAGRYQCQYRIGHYR----FRYSDTLELVVTDSI 123
EF ++ + + G Y+C YR + + SD LEL+VT+ +
Sbjct: 73 EFFLEEVTPAQGGIYRCCYRRPDWGPGVWSQPSDVLELLVTEEL 116
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,036,272
Number of Sequences: 37866
Number of extensions: 263601
Number of successful extensions: 767
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 623
Number of HSP's gapped (non-prelim): 123
length of query: 191
length of database: 18,247,518
effective HSP length: 96
effective length of query: 95
effective length of database: 14,612,382
effective search space: 1388176290
effective search space used: 1388176290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.