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Search of human proteins with 194248088
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194248088 sulfatase modifying factor 2 isoform b precursor
[Homo sapiens]
(320 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194248088 sulfatase modifying factor 2 isoform b precursor [H... 679 0.0
gi|194248087 sulfatase modifying factor 2 isoform c precursor [H... 634 0.0
gi|194248090 sulfatase modifying factor 2 isoform e precursor [H... 523 e-148
gi|226437577 sulfatase modifying factor 2 isoform g [Homo sapiens] 466 e-131
gi|194248084 sulfatase modifying factor 2 isoform d precursor [H... 269 2e-72
gi|38202250 sulfatase modifying factor 1 [Homo sapiens] 269 3e-72
gi|239756223 PREDICTED: ankyrin repeat domain-containing protein... 30 3.7
gi|239745040 PREDICTED: ankyrin repeat domain-containing protein... 30 3.7
gi|4758062 cytokine receptor-like factor 1 [Homo sapiens] 30 3.7
gi|239757832 PREDICTED: hypothetical protein [Homo sapiens] 29 6.4
gi|239752343 PREDICTED: hypothetical protein [Homo sapiens] 29 6.4
gi|239746856 PREDICTED: hypothetical protein XP_002343859 [Homo ... 29 6.4
>gi|194248088 sulfatase modifying factor 2 isoform b precursor [Homo
sapiens]
Length = 320
Score = 679 bits (1751), Expect = 0.0
Identities = 320/320 (100%), Positives = 320/320 (100%)
Query: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG
Sbjct: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
Query: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS
Sbjct: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
Query: 121 DELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVSWNDARAYCAWRGK 180
DELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVSWNDARAYCAWRGK
Sbjct: 121 DELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVSWNDARAYCAWRGK 180
Query: 181 RLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAFPA 240
RLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAFPA
Sbjct: 181 RLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAFPA 240
Query: 241 QNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRMGNTPDS 300
QNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRMGNTPDS
Sbjct: 241 QNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRMGNTPDS 300
Query: 301 ASDNLGFRCAADAGRPPGEL 320
ASDNLGFRCAADAGRPPGEL
Sbjct: 301 ASDNLGFRCAADAGRPPGEL 320
>gi|194248087 sulfatase modifying factor 2 isoform c precursor [Homo
sapiens]
Length = 305
Score = 634 bits (1635), Expect = 0.0
Identities = 305/320 (95%), Positives = 305/320 (95%), Gaps = 15/320 (4%)
Query: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG
Sbjct: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
Query: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS
Sbjct: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
Query: 121 DELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVSWNDARAYCAWRGK 180
DELRNKATQPMK PAGPGSGIRERLEHPVLHVSWNDARAYCAWRGK
Sbjct: 121 DELRNKATQPMK---------------PAGPGSGIRERLEHPVLHVSWNDARAYCAWRGK 165
Query: 181 RLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAFPA 240
RLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAFPA
Sbjct: 166 RLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAFPA 225
Query: 241 QNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRMGNTPDS 300
QNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRMGNTPDS
Sbjct: 226 QNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRMGNTPDS 285
Query: 301 ASDNLGFRCAADAGRPPGEL 320
ASDNLGFRCAADAGRPPGEL
Sbjct: 286 ASDNLGFRCAADAGRPPGEL 305
>gi|194248090 sulfatase modifying factor 2 isoform e precursor [Homo
sapiens]
Length = 358
Score = 523 bits (1346), Expect = e-148
Identities = 245/245 (100%), Positives = 245/245 (100%)
Query: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG
Sbjct: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
Query: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS
Sbjct: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
Query: 121 DELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVSWNDARAYCAWRGK 180
DELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVSWNDARAYCAWRGK
Sbjct: 121 DELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVSWNDARAYCAWRGK 180
Query: 181 RLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAFPA 240
RLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAFPA
Sbjct: 181 RLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAFPA 240
Query: 241 QNNYG 245
QNNYG
Sbjct: 241 QNNYG 245
>gi|226437577 sulfatase modifying factor 2 isoform g [Homo sapiens]
Length = 213
Score = 466 bits (1198), Expect = e-131
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 108 MFGWSFVFEDFVSDELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVS 167
MFGWSFVFEDFVSDELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVS
Sbjct: 1 MFGWSFVFEDFVSDELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVS 60
Query: 168 WNDARAYCAWRGKRLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAED 227
WNDARAYCAWRGKRLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAED
Sbjct: 61 WNDARAYCAWRGKRLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAED 120
Query: 228 GFHGVSPVNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHR 287
GFHGVSPVNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHR
Sbjct: 121 GFHGVSPVNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHR 180
Query: 288 ARVTTRMGNTPDSASDNLGFRCAADAGRPPGEL 320
ARVTTRMGNTPDSASDNLGFRCAADAGRPPGEL
Sbjct: 181 ARVTTRMGNTPDSASDNLGFRCAADAGRPPGEL 213
>gi|194248084 sulfatase modifying factor 2 isoform d precursor [Homo
sapiens]
Length = 236
Score = 269 bits (688), Expect = 2e-72
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG
Sbjct: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
Query: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS
Sbjct: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
Query: 121 DELRNKATQPMK 132
DELRNKATQPMK
Sbjct: 121 DELRNKATQPMK 132
Score = 224 bits (571), Expect = 8e-59
Identities = 112/146 (76%), Positives = 118/146 (80%), Gaps = 10/146 (6%)
Query: 178 RGKRLPTEEE---WEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSP 234
R K+ TE E W F + ++ + T +GKFPKGDKAEDGFHGVSP
Sbjct: 98 REKKYRTEAEMFGWSFVFEDFVSDEL-------RNKATQPMKGKFPKGDKAEDGFHGVSP 150
Query: 235 VNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRM 294
VNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRM
Sbjct: 151 VNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRM 210
Query: 295 GNTPDSASDNLGFRCAADAGRPPGEL 320
GNTPDSASDNLGFRCAADAGRPPGEL
Sbjct: 211 GNTPDSASDNLGFRCAADAGRPPGEL 236
>gi|38202250 sulfatase modifying factor 1 [Homo sapiens]
Length = 374
Score = 269 bits (687), Expect = 3e-72
Identities = 134/283 (47%), Positives = 178/283 (62%), Gaps = 20/283 (7%)
Query: 47 TSMVQLQGGRFLMGTNSPD-SRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTE 105
+ MV + G F MGT+ P +DGE P R T+ F +D + V+N +F FV Y TE
Sbjct: 89 SKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTE 148
Query: 106 AEMFGWSFVFEDFVSDELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLH 165
AE FG SFVFE +S++++ Q + + WWLPV+ A WR P GP S I R +HPVLH
Sbjct: 149 AEKFGDSFVFEGMLSEQVKTNIQQAVAAAPWWLPVKGANWRHPEGPDSTILHRPDHPVLH 208
Query: 166 VSWNDARAYCAWRGKRLPTEEEWEFAARGGLKGQVYPWGNWFQP---NRTNLWQGKFPKG 222
VSWNDA AYC W GKRLPTE EWE++ RGGL +++PWGN QP + N+WQG+FP
Sbjct: 209 VSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVT 268
Query: 223 DKAEDGFHGVSPVNAFPAQNNYGLYDLLGNVWEWTA---SPYQAAEQDM----------R 269
+ EDGF G +PV+AFP N YGLY+++GN WEWT+ + + + E+ + R
Sbjct: 269 NTGEDGFQGTAPVDAFP-PNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDR 327
Query: 270 VLRGASWIDTADGSANHRARVTTRMGNTPDSASDNLGFRCAAD 312
V +G S++ S +R R R NTPDS++ NLGFRCAAD
Sbjct: 328 VKKGGSYM--CHRSYCYRYRCAARSQNTPDSSASNLGFRCAAD 368
>gi|239756223 PREDICTED: ankyrin repeat domain-containing protein
ENSP00000383090-like [Homo sapiens]
Length = 270
Score = 29.6 bits (65), Expect = 3.7
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 135 LW-WLPVEKAFWR-QPAGPGSGIRERLEHP 162
+W ++PV++ FW+ Q +GPGSG R+ P
Sbjct: 21 MWDFMPVDQEFWKPQKSGPGSGSVNRIAKP 50
>gi|239745040 PREDICTED: ankyrin repeat domain-containing protein
ENSP00000383090-like [Homo sapiens]
Length = 270
Score = 29.6 bits (65), Expect = 3.7
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 135 LW-WLPVEKAFWR-QPAGPGSGIRERLEHP 162
+W ++PV++ FW+ Q +GPGSG R+ P
Sbjct: 21 MWDFMPVDQEFWKPQKSGPGSGSVNRIAKP 50
>gi|4758062 cytokine receptor-like factor 1 [Homo sapiens]
Length = 422
Score = 29.6 bits (65), Expect = 3.7
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 13 RRSAAVLMARHGLPLLPLLSLL--VGAWLKLGNGQATSMVQLQGGRFLMGTN 62
RR A AR PLLPLL LL +GA + G+G T+++ Q L+G++
Sbjct: 5 RRGPAAQSARRPPPLLPLLLLLCVLGA-PRAGSGAHTAVISPQDPTLLIGSS 55
>gi|239757832 PREDICTED: hypothetical protein [Homo sapiens]
Length = 503
Score = 28.9 bits (63), Expect = 6.4
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 168 WNDARAYCAWRGKRLPTEEEWEFAARGGLKGQV-YPWGNWFQPNR 211
W D +WRG P+ EW+ A+ G L V P W P R
Sbjct: 136 WADLEVGPSWRGALSPSPGEWQQASAGPLHLSVPGPGPAWENPER 180
>gi|239752343 PREDICTED: hypothetical protein [Homo sapiens]
Length = 518
Score = 28.9 bits (63), Expect = 6.4
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 168 WNDARAYCAWRGKRLPTEEEWEFAARGGLKGQV-YPWGNWFQPNR 211
W D +WRG P+ EW+ A+ G L V P W P R
Sbjct: 136 WADLEVGPSWRGALSPSPGEWQQASAGPLHLSVPGPGPAWENPER 180
>gi|239746856 PREDICTED: hypothetical protein XP_002343859 [Homo
sapiens]
Length = 518
Score = 28.9 bits (63), Expect = 6.4
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 168 WNDARAYCAWRGKRLPTEEEWEFAARGGLKGQV-YPWGNWFQPNR 211
W D +WRG P+ EW+ A+ G L V P W P R
Sbjct: 136 WADLEVGPSWRGALSPSPGEWQQASAGPLHLSVPGPGPAWENPER 180
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,943,273
Number of Sequences: 37866
Number of extensions: 648793
Number of successful extensions: 1266
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1255
Number of HSP's gapped (non-prelim): 13
length of query: 320
length of database: 18,247,518
effective HSP length: 102
effective length of query: 218
effective length of database: 14,385,186
effective search space: 3135970548
effective search space used: 3135970548
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.