Search of human proteins with 194097418

Search of human proteins with 194097418

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|194097418 hypothetical protein LOC338094 [Homo sapiens]
         (585 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|194097418 hypothetical protein LOC338094 [Homo sapiens]           1176   0.0  
gi|45387931 hypothetical protein LOC167555 [Homo sapiens]             219   4e-57
gi|16753203 ubiquilin 1 isoform 1 [Homo sapiens]                       35   0.15 
gi|50658071 phosphodiesterase 4D interacting protein isoform 5 [...    34   0.33 
gi|116256471 SNF1-like kinase [Homo sapiens]                           34   0.33 
gi|16753205 ubiquilin 1 isoform 2 [Homo sapiens]                       33   0.56 
gi|239758143 PREDICTED: similar to hCG1644292 [Homo sapiens]           32   2.1  
gi|239743843 PREDICTED: hypothetical protein XP_002342968 [Homo ...    32   2.1  
gi|239743812 PREDICTED: similar to hCG1644292 [Homo sapiens]           32   2.1  
gi|19923629 Fc receptor-like 2 precursor [Homo sapiens]                30   6.2  
gi|38569460 SNF1-like kinase 2 [Homo sapiens]                          30   8.0  

>gi|194097418 hypothetical protein LOC338094 [Homo sapiens]
          Length = 585

 Score = 1176 bits (3042), Expect = 0.0
 Identities = 585/585 (100%), Positives = 585/585 (100%)

Query: 1   MVCREQLSKNQVKWVFAGITCVSVVVIAAIVLAITLRRPGCELEACSPDADMLDYLLSLG 60
           MVCREQLSKNQVKWVFAGITCVSVVVIAAIVLAITLRRPGCELEACSPDADMLDYLLSLG
Sbjct: 1   MVCREQLSKNQVKWVFAGITCVSVVVIAAIVLAITLRRPGCELEACSPDADMLDYLLSLG 60

Query: 61  QISRRDALEVTWYHAANSKKAMTAALNSNITVLEADVNVEGLGTANETGVPIMAHPPTIY 120
           QISRRDALEVTWYHAANSKKAMTAALNSNITVLEADVNVEGLGTANETGVPIMAHPPTIY
Sbjct: 61  QISRRDALEVTWYHAANSKKAMTAALNSNITVLEADVNVEGLGTANETGVPIMAHPPTIY 120

Query: 121 SDNTLEQWLDAVLGSSQKGIKLDFKNIKAVGPSLDLLRQLTEEGKVRRPIWINADILKGP 180
           SDNTLEQWLDAVLGSSQKGIKLDFKNIKAVGPSLDLLRQLTEEGKVRRPIWINADILKGP
Sbjct: 121 SDNTLEQWLDAVLGSSQKGIKLDFKNIKAVGPSLDLLRQLTEEGKVRRPIWINADILKGP 180

Query: 181 NMLISTEVNATQFLALVQEKYPKATLSPGWTTFYMSTSPNRTYTQAMVEKMHELVGGVPQ 240
           NMLISTEVNATQFLALVQEKYPKATLSPGWTTFYMSTSPNRTYTQAMVEKMHELVGGVPQ
Sbjct: 181 NMLISTEVNATQFLALVQEKYPKATLSPGWTTFYMSTSPNRTYTQAMVEKMHELVGGVPQ 240

Query: 241 RVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVRDNTAVHQVYYD 300
           RVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVRDNTAVHQVYYD
Sbjct: 241 RVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVRDNTAVHQVYYD 300

Query: 301 IFEPLLSQFKQLALNATRKPMYYTGGSLIPLLQLPGDDGLNVEWLVPDVQGSGKTATMTL 360
           IFEPLLSQFKQLALNATRKPMYYTGGSLIPLLQLPGDDGLNVEWLVPDVQGSGKTATMTL
Sbjct: 301 IFEPLLSQFKQLALNATRKPMYYTGGSLIPLLQLPGDDGLNVEWLVPDVQGSGKTATMTL 360

Query: 361 PDTEGMILLNTGLEGTVAENPVPIVHTPSGNILTLESCLQQLATHPGHWGIHLQIAEPAA 420
           PDTEGMILLNTGLEGTVAENPVPIVHTPSGNILTLESCLQQLATHPGHWGIHLQIAEPAA
Sbjct: 361 PDTEGMILLNTGLEGTVAENPVPIVHTPSGNILTLESCLQQLATHPGHWGIHLQIAEPAA 420

Query: 421 LRPSLALLARLSSLGLLHWPVWVGAKISHGSFSVPGHVAGRELLTAVAEVFPHVTVAPGW 480
           LRPSLALLARLSSLGLLHWPVWVGAKISHGSFSVPGHVAGRELLTAVAEVFPHVTVAPGW
Sbjct: 421 LRPSLALLARLSSLGLLHWPVWVGAKISHGSFSVPGHVAGRELLTAVAEVFPHVTVAPGW 480

Query: 481 PEEVLGSGYREQLLTDMLELCQGLWQPVSFQMQAMLLGHSTAGAIGRLLASSPRATVTVE 540
           PEEVLGSGYREQLLTDMLELCQGLWQPVSFQMQAMLLGHSTAGAIGRLLASSPRATVTVE
Sbjct: 481 PEEVLGSGYREQLLTDMLELCQGLWQPVSFQMQAMLLGHSTAGAIGRLLASSPRATVTVE 540

Query: 541 HNPAGGDYASVRTALLAARAVDRTRVYYRLPQGYHKDLLAHVGRN 585
           HNPAGGDYASVRTALLAARAVDRTRVYYRLPQGYHKDLLAHVGRN
Sbjct: 541 HNPAGGDYASVRTALLAARAVDRTRVYYRLPQGYHKDLLAHVGRN 585


>gi|45387931 hypothetical protein LOC167555 [Homo sapiens]
          Length = 276

 Score =  219 bits (559), Expect = 4e-57
 Identities = 121/261 (46%), Positives = 160/261 (61%), Gaps = 6/261 (2%)

Query: 51  DMLDYLLSLGQISRRDALEVTWYHAANSKKAMTAALNSNITVLEADVNVEGLGTANETGV 110
           ++L+Y L   QI+  D  E+TWYHAAN K     AL S   ++EADV +   G+  E   
Sbjct: 14  NILEYFLRNSQITAEDGAEITWYHAANHKAQTNEALKSTAHMIEADVLLPSDGS--EHSQ 71

Query: 111 PIMAHPPTIYSDNTLEQWLDAVLGSSQKGIKLDFKNIKAVGPSLDLLRQLTEEGKVRRPI 170
           PIMAHPP   SDNTL++WL  V+  S KGIKLDFK++  V PS+ LL  +     ++RP+
Sbjct: 72  PIMAHPPETNSDNTLQEWLTEVM-KSNKGIKLDFKSLAVVEPSMMLLENVKRH--LKRPV 128

Query: 171 WINADILKGPNMLISTEVNATQFLALVQEKYPKATLSPGWTTFYMSTSPNRTYTQAMVEK 230
           WINADIL GPN   S  ++A  FL  V   +P  T S GWTT +     N  Y+  MV++
Sbjct: 129 WINADILPGPNGN-SKVIDAKPFLDTVTSFFPDVTFSLGWTTGWHPEKVNEGYSWTMVKE 187

Query: 231 MHELVGGVPQRVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVRD 290
           M  +   + Q VTFPVR+++VR +     WLL +S RYSLT+W   +D  SVEDLLY+RD
Sbjct: 188 MEYICNELSQPVTFPVRAALVRQSCSQLLWLLKKSNRYSLTIWTGKNDNYSVEDLLYIRD 247

Query: 291 NTAVHQVYYDIFEPLLSQFKQ 311
           +    QV+YDI EP   +FKQ
Sbjct: 248 HFDKKQVFYDILEPQNHEFKQ 268



 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 69/259 (26%), Positives = 109/259 (42%), Gaps = 19/259 (7%)

Query: 333 QLPGDDGLNVEWLVPDVQGSGKTATMTLPDTEGMILLNTGLEGTVAENPVPIV-HTPSGN 391
           Q+  +DG  + W               L  T  MI  +  L    +E+  PI+ H P  N
Sbjct: 24  QITAEDGAEITWY--HAANHKAQTNEALKSTAHMIEADVLLPSDGSEHSQPIMAHPPETN 81

Query: 392 ILTLESCLQQLATH--PGHWGIHLQIAEPAALRPSLALLARLSSLGLLHWPVWVGAKISH 449
               ++ LQ+  T     + GI L     A + PS+ LL  +     L  PVW+ A I  
Sbjct: 82  S---DNTLQEWLTEVMKSNKGIKLDFKSLAVVEPSMMLLENVKRH--LKRPVWINADILP 136

Query: 450 GSFSVPGHVAGRELLTAVAEVFPHVTVAPGW-----PEEVLGSGYREQLLTDMLELCQGL 504
           G       +  +  L  V   FP VT + GW     PE+V   GY   ++ +M  +C  L
Sbjct: 137 GPNGNSKVIDAKPFLDTVTSFFPDVTFSLGWTTGWHPEKV-NEGYSWTMVKEMEYICNEL 195

Query: 505 WQPVSFQMQAMLLGHSTAGAIGRLLASSPRATVTVEHNPAGGDYASVRTALLAARAVDRT 564
            QPV+F ++A L+  S +  +  LL  S R ++T+       D  SV   L      D+ 
Sbjct: 196 SQPVTFPVRAALVRQSCSQLLW-LLKKSNRYSLTIW--TGKNDNYSVEDLLYIRDHFDKK 252

Query: 565 RVYYRLPQGYHKDLLAHVG 583
           +V+Y + +  + +    +G
Sbjct: 253 QVFYDILEPQNHEFKQAIG 271


>gi|16753203 ubiquilin 1 isoform 1 [Homo sapiens]
          Length = 589

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 63/281 (22%), Positives = 108/281 (38%), Gaps = 31/281 (11%)

Query: 183 LISTEVNATQFLALVQEKYPKATLSPGWTTFYMSTSPNRTYTQAMVEK---MHELVGGVP 239
           L S  +N T F  L  +   +   +P      M       + Q+M+     M +L+   P
Sbjct: 158 LSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENP----FVQSMLSNPDLMRQLIMANP 213

Query: 240 QRVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVRDNT------- 292
           Q      R+       P  S +L+  +    TL + A +P  +++++  +D         
Sbjct: 214 QMQQLIQRN-------PEISHMLNNPDIMRQTL-ELARNPAMMQEMMRNQDRALSNLESI 265

Query: 293 -----AVHQVYYDIFEPLLSQF-KQLALNATRKPMYYT-GGSLIPLLQLPGDDGLNVEWL 345
                A+ ++Y DI EP+LS   +Q   N     +  T  G      +    D L   W 
Sbjct: 266 PGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTENRDPLPNPWA 325

Query: 346 VPDVQGSGKTA--TMTLPDTEGMILLNTGLEGTVAENPVPIVHTPSGNILTLESCLQQLA 403
               Q S  ++    T+  T G     T  + T A N VP V     N   ++S LQQ+ 
Sbjct: 326 PQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQIT 385

Query: 404 THPGHWGIHLQIAEPAALRPSLALLARLSSLGLLHWPVWVG 444
            +P      L      ++  SL+    L++  +L+ P++ G
Sbjct: 386 ENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNPLFAG 426


>gi|50658071 phosphodiesterase 4D interacting protein isoform 5
          [Homo sapiens]
          Length = 1132

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 2  VCREQLSKNQVKWVFAGITCVSVVVIAAIVLAITLRRPGCELEACSPDADMLDYLLSLGQ 61
          +C  +L  NQ +W+F   + +++ V+ + VL   + R G    ACS  A MLD +     
Sbjct: 7  ICARELCGNQRRWIFHTASKLNLQVLLSHVLGKDVPRDGKAEFACSKCAFMLDRIYRFDT 66

Query: 62 -ISRRDALEV 70
           I+R +AL +
Sbjct: 67 VIARIEALSI 76


>gi|116256471 SNF1-like kinase [Homo sapiens]
          Length = 783

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 36/153 (23%)

Query: 49  DADMLDYLLSLGQISRRDALEVTW-----------YHAANSK-KAMTAALNSNITVLEAD 96
           + +M DYL S G +S  +A +  W           +H  +   K     L+ N+ +  AD
Sbjct: 108 NGEMFDYLTSNGHLSENEARKKFWQILSAVEYCHDHHIVHRDLKTENLLLDGNMDIKLAD 167

Query: 97  VNVEGLGTANETGVPIMAH--PPTIYSDNTLEQWLDAVLGSSQKGIKLDFKNIKAV---- 150
               G G   ++G P+      P   +    E       G   +G +LD  ++  V    
Sbjct: 168 F---GFGNFYKSGEPLSTWCGSPPYAAPEVFE-------GKEYEGPQLDIWSLGVVLYVL 217

Query: 151 --------GPSLDLLRQLTEEGKVRRPIWINAD 175
                   GP+L  LRQ   EG+ R P +++ D
Sbjct: 218 VCGSLPFDGPNLPTLRQRVLEGRFRIPFFMSQD 250


>gi|16753205 ubiquilin 1 isoform 2 [Homo sapiens]
          Length = 561

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 56/243 (23%), Positives = 92/243 (37%), Gaps = 31/243 (12%)

Query: 183 LISTEVNATQFLALVQEKYPKATLSPGWTTFYMSTSPNRTYTQAMVEK---MHELVGGVP 239
           L S  +N T F  L  +   +   +P      M       + Q+M+     M +L+   P
Sbjct: 158 LSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENP----FVQSMLSNPDLMRQLIMANP 213

Query: 240 QRVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVRDNT------- 292
           Q      R+       P  S +L+  +    TL + A +P  +++++  +D         
Sbjct: 214 QMQQLIQRN-------PEISHMLNNPDIMRQTL-ELARNPAMMQEMMRNQDRALSNLESI 265

Query: 293 -----AVHQVYYDIFEPLLSQF-KQLALNATRKPMYYT-GGSLIPLLQLPGDDGLNVEWL 345
                A+ ++Y DI EP+LS   +Q   N     +  T  G      +    D L   W 
Sbjct: 266 PGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTENRDPLPNPWA 325

Query: 346 VPDVQGSGKTA--TMTLPDTEGMILLNTGLEGTVAENPVPIVHTPSGNILTLESCLQQLA 403
               Q S  ++    T+  T G     T  + T A N VP V     N   ++S LQQ+ 
Sbjct: 326 PQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQIT 385

Query: 404 THP 406
            +P
Sbjct: 386 ENP 388


>gi|239758143 PREDICTED: similar to hCG1644292 [Homo sapiens]
          Length = 115

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 8/62 (12%)

Query: 230 KMHELVGGVPQRVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVR 289
           K+ E  G  P+++T PV+ +  + AWP         ER + T W+     +  E +  V 
Sbjct: 34  KIEESAGETPRKITRPVKETSEKFAWP--------QERPTKTTWEEKETSVKTECVAGVT 85

Query: 290 DN 291
            N
Sbjct: 86  SN 87


>gi|239743843 PREDICTED: hypothetical protein XP_002342968 [Homo
           sapiens]
          Length = 139

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 8/62 (12%)

Query: 230 KMHELVGGVPQRVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVR 289
           K+ E  G  P+++T PV+ +  + AWP         ER + T W+     +  E +  V 
Sbjct: 34  KIEESAGETPRKITRPVKETSEKFAWP--------QERPTKTTWEEKETSVKTECVAGVT 85

Query: 290 DN 291
            N
Sbjct: 86  SN 87


>gi|239743812 PREDICTED: similar to hCG1644292 [Homo sapiens]
          Length = 139

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 8/62 (12%)

Query: 230 KMHELVGGVPQRVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVR 289
           K+ E  G  P+++T PV+ +  + AWP         ER + T W+     +  E +  V 
Sbjct: 34  KIEESAGETPRKITRPVKETSEKFAWP--------QERPTKTTWEEKETSVKTECVAGVT 85

Query: 290 DN 291
            N
Sbjct: 86  SN 87


>gi|19923629 Fc receptor-like 2 precursor [Homo sapiens]
          Length = 508

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 11/104 (10%)

Query: 481 PEEVLGSGYREQLLTDMLEL-CQGLW--QPVSFQM--QAMLLGHSTAGAIGRLLASSPRA 535
           P   L S   +  + D+LEL C+ L    P+ +Q   + + LG+S+A + G    +S   
Sbjct: 300 PVLTLRSPGAQAAVGDLLELHCEALRGSPPILYQFYHEDVTLGNSSAPSGG---GASFNL 356

Query: 536 TVTVEHNPAGGDYASVRTALLAARAVDRTRVYYRLPQGYHKDLL 579
           ++T EH+   G+Y+      L A+  +   V    P GY +DL+
Sbjct: 357 SLTAEHS---GNYSCEANNGLGAQCSEAVPVSISGPDGYRRDLM 397


>gi|38569460 SNF1-like kinase 2 [Homo sapiens]
          Length = 926

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 31/150 (20%), Positives = 64/150 (42%), Gaps = 30/150 (20%)

Query: 49  DADMLDYLLSLGQISRRDALEVTWYHAA-----NSKKAMTAALNSNITVLEADVNVE--- 100
           + ++ DYL + G+++  +A    W   +     + +K +   L +   +L+ ++N++   
Sbjct: 101 NGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKIVHRDLKAENLLLDNNMNIKIAD 160

Query: 101 -GLGTANETG--VPIMAHPPTIYSDNTLEQWLDAVLGSSQKGIKLDFKNIKAV------- 150
            G G   ++G  +      P   +    E       G   +G +LD  ++  V       
Sbjct: 161 FGFGNFFKSGELLATWCGSPPYAAPEVFE-------GQQYEGPQLDIWSMGVVLYVLVCG 213

Query: 151 -----GPSLDLLRQLTEEGKVRRPIWINAD 175
                GP+L +LRQ   EG+ R P +++ D
Sbjct: 214 ALPFDGPTLPILRQRVLEGRFRIPYFMSED 243


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,288,667
Number of Sequences: 37866
Number of extensions: 973099
Number of successful extensions: 2253
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2240
Number of HSP's gapped (non-prelim): 12
length of query: 585
length of database: 18,247,518
effective HSP length: 108
effective length of query: 477
effective length of database: 14,157,990
effective search space: 6753361230
effective search space used: 6753361230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.