Search of human proteins with 189571652

Search of human proteins with 189571652

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|189571652 leptin receptor overlapping transcript-like 1
isoform 1 [Homo sapiens]
         (131 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|189571652 leptin receptor overlapping transcript-like 1 isofo...   270   3e-73
gi|8923785 leptin receptor gene-related protein [Homo sapiens]        193   3e-50
gi|189571654 leptin receptor overlapping transcript-like 1 isofo...   189   5e-49
gi|17998700 phosphatidylinositol glycan anchor biosynthesis, cla...    32   0.14 
gi|190343023 ATP-binding cassette, sub-family C, member 6 isofor...    28   2.7  
gi|239756495 PREDICTED: hypothetical protein [Homo sapiens]            28   2.7  
gi|30581164 neuropeptides B/W receptor 2 [Homo sapiens]                27   3.5  
gi|53828710 olfactory receptor, family 5, subfamily D, member 16...    27   4.6  
gi|111378393 sodium channel, voltage-gated, type VII, alpha [Hom...    26   7.8  

>gi|189571652 leptin receptor overlapping transcript-like 1 isoform
           1 [Homo sapiens]
          Length = 131

 Score =  270 bits (689), Expect = 3e-73
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD 60
           MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD
Sbjct: 1   MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD 60

Query: 61  AMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIFATILGFFLVF 120
           AMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIFATILGFFLVF
Sbjct: 61  AMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIFATILGFFLVF 120

Query: 121 GSNDDFSWQQW 131
           GSNDDFSWQQW
Sbjct: 121 GSNDDFSWQQW 131


>gi|8923785 leptin receptor gene-related protein [Homo sapiens]
          Length = 131

 Score =  193 bits (491), Expect = 3e-50
 Identities = 89/131 (67%), Positives = 106/131 (80%)

Query: 1   MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD 60
           MAG+KAL++LSF GAIGL FLMLGCAL  Y  YWPLFVL F+ +SPIP+ IA+R+  D+D
Sbjct: 1   MAGVKALVALSFSGAIGLTFLMLGCALEDYGVYWPLFVLIFHAISPIPHFIAKRVTYDSD 60

Query: 61  AMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIFATILGFFLVF 120
           A S+AC+ELA F TTGIVVSAFG P++ AR  +I+WGAC LVL GN VIF TI GFFL+F
Sbjct: 61  ATSSACRELAYFFTTGIVVSAFGFPVILARVAVIKWGACGLVLAGNAVIFLTIQGFFLIF 120

Query: 121 GSNDDFSWQQW 131
           G  DDFSW+QW
Sbjct: 121 GRGDDFSWEQW 131


>gi|189571654 leptin receptor overlapping transcript-like 1
          isoform 2 [Homo sapiens]
          Length = 169

 Score =  189 bits (480), Expect = 5e-49
 Identities = 93/94 (98%), Positives = 94/94 (100%)

Query: 1  MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD 60
          MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD
Sbjct: 1  MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD 60

Query: 61 AMSNACKELAIFLTTGIVVSAFGLPIVFARAHLI 94
          AMSNACKELAIFLTTGIVVSAFGLPIVFARAHL+
Sbjct: 61 AMSNACKELAIFLTTGIVVSAFGLPIVFARAHLM 94


>gi|17998700 phosphatidylinositol glycan anchor biosynthesis, class
           U [Homo sapiens]
          Length = 435

 Score = 32.0 bits (71), Expect = 0.14
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 4/64 (6%)

Query: 28  PIYNKYWPLFVLFFYILSPIPYCIARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPIV 87
           P+  +Y PL V  FY+L+  PY I   +   T A++N    +A F+ T I  SAF   I 
Sbjct: 130 PMEMRYIPLKVALFYLLN--PYTILSCVAKSTCAINNTL--IAFFILTTIKGSAFLSAIF 185

Query: 88  FARA 91
            A A
Sbjct: 186 LALA 189


>gi|190343023 ATP-binding cassette, sub-family C, member 6 isoform 1
            [Homo sapiens]
          Length = 1503

 Score = 27.7 bits (60), Expect = 2.7
 Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 23/127 (18%)

Query: 4    IKALISLSFGGAIGLMFLMLGCALPIYN-KYWPLFVLF--FYILSPIPYCIARRLVDDTD 60
            +++L+  +FG  +  + L++  A P+      PLF+L+  F  L  +  C  RRL  ++ 
Sbjct: 1063 LRSLLMYAFG--LLEVSLVVAVATPLATVAILPLFLLYAGFQSLYVVSSCQLRRL--ESA 1118

Query: 61   AMSNACKELAIFLTTGIVVSAFGLP----------------IVFARAHLIEWGACALVLT 104
            + S+ C  +A       VV AF                   I F R     W A  + L 
Sbjct: 1119 SYSSVCSHMAETFQGSTVVRAFRTQAPFVAQNNARVDESQRISFPRLVADRWLAANVELL 1178

Query: 105  GNTVIFA 111
            GN ++FA
Sbjct: 1179 GNGLVFA 1185


>gi|239756495 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1312

 Score = 27.7 bits (60), Expect = 2.7
 Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 23/127 (18%)

Query: 4   IKALISLSFGGAIGLMFLMLGCALPIYN-KYWPLFVLF--FYILSPIPYCIARRLVDDTD 60
           +++L+  +FG  +  + L++  A P+      PLF+L+  F  L  +  C  RRL  ++ 
Sbjct: 872 LRSLLMYAFG--LLEVSLVVAVATPLATVAILPLFLLYAGFQSLYVVSSCQLRRL--ESA 927

Query: 61  AMSNACKELAIFLTTGIVVSAFGLP----------------IVFARAHLIEWGACALVLT 104
           + S+ C  +A       VV AF                   I F R     W A  + L 
Sbjct: 928 SYSSVCSHMAETFQGSTVVRAFRTQAPFVAQNNARVDESQRISFPRLVADRWLAANVELL 987

Query: 105 GNTVIFA 111
           GN ++FA
Sbjct: 988 GNGLVFA 994


>gi|30581164 neuropeptides B/W receptor 2 [Homo sapiens]
          Length = 333

 Score = 27.3 bits (59), Expect = 3.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 84  LPIVFARAHLIEWGACALVLTGNTVIFATIL 114
           LP ++     +  G CA+ LTGNT +   IL
Sbjct: 41  LPFLYVLLPAVYSGICAVGLTGNTAVILVIL 71


>gi|53828710 olfactory receptor, family 5, subfamily D, member 16
           [Homo sapiens]
          Length = 328

 Score = 26.9 bits (58), Expect = 4.6
 Identities = 20/66 (30%), Positives = 27/66 (40%)

Query: 59  TDAMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIFATILGFFL 118
           T A  N    L I LT+   +    L +  A  H   +  CA  LT  T+   TIL  + 
Sbjct: 203 TVATFNEISTLLIILTSYAFIIVTTLKMPSASGHRKVFSTCASHLTAITIFHGTILFLYC 262

Query: 119 VFGSND 124
           V  S +
Sbjct: 263 VPNSKN 268


>gi|111378393 sodium channel, voltage-gated, type VII, alpha [Homo
           sapiens]
          Length = 1682

 Score = 26.2 bits (56), Expect = 7.8
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 7   LISLSFGGAIGLMFLMLGCALPIYN--KYWPLFVLFFYILS 45
           LI L      G+  L L   L I+   KYWP F +  + LS
Sbjct: 581 LIELCLANVAGMALLRLFRMLRIFKLGKYWPTFQILMWSLS 621


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.333    0.147    0.485 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,516,373
Number of Sequences: 37866
Number of extensions: 170216
Number of successful extensions: 519
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 514
Number of HSP's gapped (non-prelim): 9
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.