Guide to the Human Genome
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Name: LEPROTL1 Sequence: fasta or formatted (131aa) NCBI GI: 189571652
Description:

leptin receptor overlapping transcript-like 1 isoform 1

Referenced in:

Adipose Tissue

Other entries for this name:
alt prot [169aa] leptin receptor overlapping transcript-like 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         14           1
 C cysteine            3.1          4           1
 D aspartate           3.8          5           2
 E glutamate           1.5          2           1
 F phenylalanine       9.9         13           2
 G glycine             8.4         11           2
 H histidine           0.8          1           1
 I isoleucine          9.9         13           1
 K lysine              2.3          3           1
 L leucine            13.7         18           1
 M methionine          3.1          4           1
 N asparagine          3.1          4           1
 P proline             3.8          5           1
 Q glutamine           1.5          2           2
 R arginine            2.3          3           2
 S serine              5.3          7           1
 T threonine           4.6          6           2
 V valine              6.1          8           2
 W tryptophan          3.1          4           1
 Y tyrosine            3.1          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leptin receptor overlapping transcript-like 1 isofo... 
LEPROT                0.686   leptin receptor gene-related protein 
LEPROTL1              0.669   leptin receptor overlapping transcript-like 1 isofo...
PIGU                  0.029   phosphatidylinositol glycan anchor biosynthesis, cla...
ABCC6                 0.012   ATP-binding cassette, sub-family C, member 6 isofor...
LOC100292715          0.012   PREDICTED: hypothetical protein 
NPBWR2                0.008   neuropeptides B/W receptor 2 
OR5D16                0.008   olfactory receptor, family 5, subfamily D, member 16...
SCN7A                 0.004   sodium channel, voltage-gated, type VII, alpha [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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