Guide to the Human Genome
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Name: LEPROTL1 Sequence: fasta or formatted (169aa) NCBI GI: 189571654
Description:

leptin receptor overlapping transcript-like 1 isoform 2

Referenced in:

Adipose Tissue

Other entries for this name:
alt prot [131aa] leptin receptor overlapping transcript-like 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.4         21           3
 C cysteine            2.4          4           1
 D aspartate           2.4          4           2
 E glutamate           3.0          5           1
 F phenylalanine       6.5         11           2
 G glycine             7.1         12           2
 H histidine           0.6          1           1
 I isoleucine          5.9         10           1
 K lysine              2.4          4           1
 L leucine            16.6         28           2
 M methionine          4.1          7           1
 N asparagine          1.2          2           1
 P proline             7.7         13           2
 Q glutamine           3.0          5           2
 R arginine            5.9         10           2
 S serine              7.1         12           1
 T threonine           4.1          7           2
 V valine              4.1          7           2
 W tryptophan          1.2          2           1
 Y tyrosine            2.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leptin receptor overlapping transcript-like 1 isofo... 
LEPROTL1              0.527   leptin receptor overlapping transcript-like 1 isofo...
LEPROT                0.338   leptin receptor gene-related protein 
PIGU                  0.023   phosphatidylinositol glycan anchor biosynthesis, cla...
LOC100293297          0.010   PREDICTED: similar to hCG1785205 
LOC100288352          0.010   PREDICTED: similar to hCG1785205 
LOC100288352          0.010   PREDICTED: hypothetical protein XP_002343764 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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