Search of human proteins with 11321583

Search of human proteins with 11321583

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11321583 succinate-CoA ligase, ADP-forming, beta subunit
precursor [Homo sapiens]
         (463 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11321583 succinate-CoA ligase, ADP-forming, beta subunit prec...   900   0.0  
gi|157779135 succinate-CoA ligase, GDP-forming beta subunit prec...   410   e-114
gi|239755885 PREDICTED: similar to hCG1791842 [Homo sapiens]          375   e-104
gi|239750402 PREDICTED: similar to hCG1791842 isoform 3 [Homo sa...   375   e-104
gi|239744702 PREDICTED: similar to sucb isoform 1 [Homo sapiens]      375   e-104
gi|38569423 ATP citrate lyase isoform 2 [Homo sapiens]                 50   4e-06
gi|38569421 ATP citrate lyase isoform 1 [Homo sapiens]                 50   4e-06
gi|5032097 solute carrier family 6 member 8 isoform 1 [Homo sapi...    32   0.93 
gi|218563756 solute carrier family 6 member 8 isoform 2 [Homo sa...    32   0.93 
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa...    30   3.5  
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]         30   6.0  
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]         30   6.0  
gi|42490749 ATP-binding cassette, sub-family B, member 7 [Homo s...    29   7.9  

>gi|11321583 succinate-CoA ligase, ADP-forming, beta subunit
           precursor [Homo sapiens]
          Length = 463

 Score =  900 bits (2327), Expect = 0.0
 Identities = 463/463 (100%), Positives = 463/463 (100%)

Query: 1   MAASMFYGRLVAVATLRNHRPRTAQRAAAQVLGSSGLFNNHGLQVQQQQQRNLSLHEYMS 60
           MAASMFYGRLVAVATLRNHRPRTAQRAAAQVLGSSGLFNNHGLQVQQQQQRNLSLHEYMS
Sbjct: 1   MAASMFYGRLVAVATLRNHRPRTAQRAAAQVLGSSGLFNNHGLQVQQQQQRNLSLHEYMS 60

Query: 61  MELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVK 120
           MELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVK
Sbjct: 61  MELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVK 120

Query: 121 IVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGP 180
           IVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGP
Sbjct: 121 IVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGP 180

Query: 181 VLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAENM 240
           VLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAENM
Sbjct: 181 VLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAENM 240

Query: 241 VKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDER 300
           VKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDER
Sbjct: 241 VKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDER 300

Query: 301 DKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEA 360
           DKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEA
Sbjct: 301 DKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEA 360

Query: 361 FKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALI 420
           FKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALI
Sbjct: 361 FKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALI 420

Query: 421 ADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLPI 463
           ADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLPI
Sbjct: 421 ADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLPI 463


>gi|157779135 succinate-CoA ligase, GDP-forming beta subunit
           precursor [Homo sapiens]
          Length = 432

 Score =  410 bits (1054), Expect = e-114
 Identities = 212/397 (53%), Positives = 282/397 (71%)

Query: 45  VQQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAG 104
           VQ   +R L+L EY S +L+ + GV V + +VA + +EA   AK+L +K++V+KAQ+LAG
Sbjct: 30  VQLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAG 89

Query: 105 GRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPR 164
           GRGKG F SGLKGGV +   P     ++ QMIG  L TKQT ++G   N+V+V E     
Sbjct: 90  GRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDIS 149

Query: 165 REYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQ 224
           RE Y AI M+RS  GPVL+GS  GGV+IE+VAA +PE I KE IDI EGIK  QA ++A+
Sbjct: 150 RETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAE 209

Query: 225 KMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYR 284
            +GF   +   AA+ + KLY+LFLK DAT +E+NP  E  +G V+C DAKINFD N+ +R
Sbjct: 210 NLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 269

Query: 285 QKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPAN 344
           QK IF + D ++ +  + +AAK +L YIGLDGNI C VNGAGLAMAT DII L+GG PAN
Sbjct: 270 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPAN 329

Query: 345 FLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPV 404
           FLD+GGG    QV +AFKL+T+D KV AILVNIFGGI+ C +IA GI  A ++LE+K+P+
Sbjct: 330 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPL 389

Query: 405 VVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
           VVRL+GT V +A+ ++ +SGL I +  DL++AA+  V
Sbjct: 390 VVRLEGTNVQEAQKILNNSGLPITSAIDLEDAAKKAV 426


>gi|239755885 PREDICTED: similar to hCG1791842 [Homo sapiens]
          Length = 536

 Score =  375 bits (963), Expect = e-104
 Identities = 200/397 (50%), Positives = 274/397 (69%), Gaps = 1/397 (0%)

Query: 45  VQQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAG 104
           VQ   +R LSL E  S +L+ +  V+V + +VA + +EA   AK+L +K++V+KAQ+LAG
Sbjct: 135 VQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAG 194

Query: 105 GRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPR 164
           GRGKG F SGLK GV +   P     ++ QMIG  L TKQT ++G   N+V+V E     
Sbjct: 195 GRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDIS 254

Query: 165 REYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQ 224
           RE Y AI M++S  GP+L+GS   G++IE+VAA +PE I KE IDI EGIK  QA ++A+
Sbjct: 255 RETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAE 314

Query: 225 KMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYR 284
            +GF   +   AA+ + KLY+LFLK DAT +E+NP  E  +G V+C DAKINFD N+ ++
Sbjct: 315 NLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQ 374

Query: 285 QKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPAN 344
           QK IF + D ++ +  + +AAK +L YIGLDGNI C VNGAGLAMAT DII L+G  PA+
Sbjct: 375 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPAS 434

Query: 345 FLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPV 404
           FLD+GGG    QV +AF L T+D KV AILVNIFGGI+ C +IA GI  A ++LE+K+P+
Sbjct: 435 FLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPL 494

Query: 405 VVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
           VV L+GT V +A+ ++ +S L I +  DL++AA+  V
Sbjct: 495 VVWLEGTNVQEAQEIL-NSRLPITSAVDLEDAAKKAV 530


>gi|239750402 PREDICTED: similar to hCG1791842 isoform 3 [Homo
           sapiens]
          Length = 543

 Score =  375 bits (963), Expect = e-104
 Identities = 200/397 (50%), Positives = 274/397 (69%), Gaps = 1/397 (0%)

Query: 45  VQQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAG 104
           VQ   +R LSL E  S +L+ +  V+V + +VA + +EA   AK+L +K++V+KAQ+LAG
Sbjct: 142 VQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAG 201

Query: 105 GRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPR 164
           GRGKG F SGLK GV +   P     ++ QMIG  L TKQT ++G   N+V+V E     
Sbjct: 202 GRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDIS 261

Query: 165 REYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQ 224
           RE Y AI M++S  GP+L+GS   G++IE+VAA +PE I KE IDI EGIK  QA ++A+
Sbjct: 262 RETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAE 321

Query: 225 KMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYR 284
            +GF   +   AA+ + KLY+LFLK DAT +E+NP  E  +G V+C DAKINFD N+ ++
Sbjct: 322 NLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQ 381

Query: 285 QKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPAN 344
           QK IF + D ++ +  + +AAK +L YIGLDGNI C VNGAGLAMAT DII L+G  PA+
Sbjct: 382 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPAS 441

Query: 345 FLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPV 404
           FLD+GGG    QV +AF L T+D KV AILVNIFGGI+ C +IA GI  A ++LE+K+P+
Sbjct: 442 FLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPL 501

Query: 405 VVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
           VV L+GT V +A+ ++ +S L I +  DL++AA+  V
Sbjct: 502 VVWLEGTNVQEAQEIL-NSRLPITSAVDLEDAAKKAV 537


>gi|239744702 PREDICTED: similar to sucb isoform 1 [Homo sapiens]
          Length = 543

 Score =  375 bits (963), Expect = e-104
 Identities = 200/397 (50%), Positives = 274/397 (69%), Gaps = 1/397 (0%)

Query: 45  VQQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAG 104
           VQ   +R LSL E  S +L+ +  V+V + +VA + +EA   AK+L +K++V+KAQ+LAG
Sbjct: 142 VQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAG 201

Query: 105 GRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPR 164
           GRGKG F SGLK GV +   P     ++ QMIG  L TKQT ++G   N+V+V E     
Sbjct: 202 GRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDIS 261

Query: 165 REYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQ 224
           RE Y AI M++S  GP+L+GS   G++IE+VAA +PE I KE IDI EGIK  QA ++A+
Sbjct: 262 RETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAE 321

Query: 225 KMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYR 284
            +GF   +   AA+ + KLY+LFLK DAT +E+NP  E  +G V+C DAKINFD N+ ++
Sbjct: 322 NLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQ 381

Query: 285 QKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPAN 344
           QK IF + D ++ +  + +AAK +L YIGLDGNI C VNGAGLAMAT DII L+G  PA+
Sbjct: 382 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPAS 441

Query: 345 FLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPV 404
           FLD+GGG    QV +AF L T+D KV AILVNIFGGI+ C +IA GI  A ++LE+K+P+
Sbjct: 442 FLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPL 501

Query: 405 VVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
           VV L+GT V +A+ ++ +S L I +  DL++AA+  V
Sbjct: 502 VVWLEGTNVQEAQEIL-NSRLPITSAVDLEDAAKKAV 537


>gi|38569423 ATP citrate lyase isoform 2 [Homo sapiens]
          Length = 1091

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 35/286 (12%)

Query: 166 EYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIE-EGIKKEQALQLAQ 224
           E+Y  I   R  +G  ++    GGV++ DV A++ + ++     +  E IKK   +    
Sbjct: 118 EFYVCIYATR--EGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHA-- 173

Query: 225 KMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGA-VLCMDAKINFDSNSAY 283
               P +  E  A  +  L++ +     T +EINP+V   DG  VL + AK++  ++   
Sbjct: 174 ----PEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYIC 229

Query: 284 RQK-------KIFDLQDWTQE----DERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATM 332
           + K         F  + + +E    D   K  A   L  +   G I  +V G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 333 DIIKLHGGTP--ANFLDVGGGATVHQVTEAFK----LITSDKKVLAILVNIFGGIMRCDV 386
           D I   GG    AN+ +  G  +  Q  +  K    L+T +K     ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 387 IA---QGIVMAVKDL-----EIKIPVVVRLQGTRVDDAKALIADSG 424
           +A   +GIV A++D      E ++ + VR  G    +   ++ + G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|38569421 ATP citrate lyase isoform 1 [Homo sapiens]
          Length = 1101

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 35/286 (12%)

Query: 166 EYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIE-EGIKKEQALQLAQ 224
           E+Y  I   R  +G  ++    GGV++ DV A++ + ++     +  E IKK   +    
Sbjct: 118 EFYVCIYATR--EGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHA-- 173

Query: 225 KMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGA-VLCMDAKINFDSNSAY 283
               P +  E  A  +  L++ +     T +EINP+V   DG  VL + AK++  ++   
Sbjct: 174 ----PEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYIC 229

Query: 284 RQK-------KIFDLQDWTQE----DERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATM 332
           + K         F  + + +E    D   K  A   L  +   G I  +V G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 333 DIIKLHGGTP--ANFLDVGGGATVHQVTEAFK----LITSDKKVLAILVNIFGGIMRCDV 386
           D I   GG    AN+ +  G  +  Q  +  K    L+T +K     ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 387 IA---QGIVMAVKDL-----EIKIPVVVRLQGTRVDDAKALIADSG 424
           +A   +GIV A++D      E ++ + VR  G    +   ++ + G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|5032097 solute carrier family 6 member 8 isoform 1 [Homo
           sapiens]
          Length = 635

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 16/150 (10%)

Query: 320 CLVNGAGLAMATMDIIKLHGGTPANFLDV-------GGGATVHQVTEAFKLITSDKKVLA 372
           C  NG G+ +    +I L GG P  FL++        G   V  +   FK +     V+ 
Sbjct: 82  CYKNGGGVFLIPYVLIALVGGIPIFFLEISLGQFMKAGSINVWNICPLFKGLGYASMVIV 141

Query: 373 ILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALI-----ADSGLKI 427
              N +  IM   V+A G    VK     +P           D   +      A++ L  
Sbjct: 142 FYCNTY-YIM---VLAWGFYYLVKSFTTTLPWATCGHTWNTPDCVEIFRHEDCANASLAN 197

Query: 428 LACDDLDEAARMVVKLSEIVTLAKQAHVDV 457
           L CD L +    V++  E   L     ++V
Sbjct: 198 LTCDQLADRRSPVIEFWENKVLRLSGGLEV 227


>gi|218563756 solute carrier family 6 member 8 isoform 2 [Homo
           sapiens]
          Length = 625

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 16/150 (10%)

Query: 320 CLVNGAGLAMATMDIIKLHGGTPANFLDV-------GGGATVHQVTEAFKLITSDKKVLA 372
           C  NG G+ +    +I L GG P  FL++        G   V  +   FK +     V+ 
Sbjct: 82  CYKNGGGVFLIPYVLIALVGGIPIFFLEISLGQFMKAGSINVWNICPLFKGLGYASMVIV 141

Query: 373 ILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALI-----ADSGLKI 427
              N +  IM   V+A G    VK     +P           D   +      A++ L  
Sbjct: 142 FYCNTY-YIM---VLAWGFYYLVKSFTTTLPWATCGHTWNTPDCVEIFRHEDCANASLAN 197

Query: 428 LACDDLDEAARMVVKLSEIVTLAKQAHVDV 457
           L CD L +    V++  E   L     ++V
Sbjct: 198 LTCDQLADRRSPVIEFWENKVLRLSGGLEV 227


>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
            sapiens]
          Length = 2997

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 15/128 (11%)

Query: 212  EGIKKEQALQLAQKMGFPPNIVESA-----AENMVKLYSLFLKYDATMIEI-------NP 259
            + ++  Q+LQLA  MGFPP +  +A     A+N   +  L L   A +  +       N 
Sbjct: 2759 QNLQNLQSLQLAGLMGFPPGLATAATAGGDAKNPAAVLPLMLPGMAGLPNVFGLGGLLNN 2818

Query: 260  MVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIG 319
             +  + G      ++   + +++  ++K  + +D  ++ E+  DA  A       +G++G
Sbjct: 2819 PLSAATGNTTTASSQGEPEDSTSKGEEKGNENEDENKDSEKSTDAVSA---ADSANGSVG 2875

Query: 320  CLVNGAGL 327
                 AGL
Sbjct: 2876 AATAPAGL 2883


>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
          Length = 2039

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 14/46 (30%), Positives = 27/46 (58%)

Query: 274 KINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIG 319
           KI  +S  ++R++KI DL++  +    DKD+   +L    ++ +IG
Sbjct: 730 KIKKESEKSFREEKIKDLKEERENIPTDKDSEFTSLGMSAIEESIG 775


>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
          Length = 2062

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 14/46 (30%), Positives = 27/46 (58%)

Query: 274 KINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIG 319
           KI  +S  ++R++KI DL++  +    DKD+   +L    ++ +IG
Sbjct: 753 KIKKESEKSFREEKIKDLKEERENIPTDKDSEFTSLGMSAIEESIG 798


>gi|42490749 ATP-binding cassette, sub-family B, member 7 [Homo
           sapiens]
          Length = 753

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 74  GYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLK--GGVK 120
           G ++ SP+E YA+AK  G  D +++   +  G      E GLK  GG K
Sbjct: 570 GNISASPEEVYAVAKLAGLHDAILR---MPHGYDTQVGERGLKLSGGEK 615


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,475,482
Number of Sequences: 37866
Number of extensions: 653307
Number of successful extensions: 1608
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1599
Number of HSP's gapped (non-prelim): 15
length of query: 463
length of database: 18,247,518
effective HSP length: 106
effective length of query: 357
effective length of database: 14,233,722
effective search space: 5081438754
effective search space used: 5081438754
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.