Guide to the Human Genome
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Name: KPTN Sequence: fasta or formatted (436aa) NCBI GI: 103471989
Description:

kaptin (actin binding protein)

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         30           2
 C cysteine            1.6          7           1
 D aspartate           5.7         25           1
 E glutamate           6.9         30           2
 F phenylalanine       3.9         17           1
 G glycine             8.3         36           2
 H histidine           2.5         11           1
 I isoleucine          3.0         13           1
 K lysine              3.0         13           1
 L leucine            14.0         61           3
 M methionine          1.1          5           2
 N asparagine          3.0         13           1
 P proline             5.0         22           2
 Q glutamine           6.2         27           1
 R arginine            5.7         25           4
 S serine              8.0         35           2
 T threonine           3.2         14           1
 V valine              8.3         36           2
 W tryptophan          0.7          3           1
 Y tyrosine            3.0         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kaptin (actin binding protein) 
CRTAC1                0.007   cartilage acidic protein 1 
KIAA1026              0.006   kazrin isoform E 
KIAA1026              0.006   kazrin isoform A 
FLJ32810              0.005   Rho-type GTPase-activating protein FLJ32810 
ITFG2                 0.005   integrin alpha FG-GAP repeat containing 2 
EPHB4                 0.005   EPH receptor B4 precursor 
EPHB1                 0.005   ephrin receptor EphB1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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