Search of human proteins with 10047140

Search of human proteins with 10047140

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|10047140 partner of NOB1 [Homo sapiens]
         (252 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|10047140 partner of NOB1 [Homo sapiens]                            496   e-141
gi|117676403 HIV-1 rev binding protein 2 [Homo sapiens]                41   0.001
gi|238624257 insulin-like growth factor 2 mRNA binding protein 1...    34   0.14 
gi|56237027 insulin-like growth factor 2 mRNA binding protein 1 ...    34   0.14 
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]            32   0.69 
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]            32   0.69 
gi|13236585 fibronectin type III and SPRY domain containing 1 [H...    31   0.90 
gi|56118219 insulin-like growth factor 2 mRNA binding protein 2 ...    31   0.90 
gi|64085377 insulin-like growth factor 2 mRNA binding protein 2 ...    31   0.90 
gi|30795212 insulin-like growth factor 2 mRNA binding protein 3 ...    30   1.5  
gi|66730423 hypothetical protein LOC389384 [Homo sapiens]              30   2.0  
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]            30   2.6  
gi|31317309 phosphatidylinositol-4-phosphate 5-kinase, type I, g...    30   2.6  
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa...    29   3.4  
gi|239754487 PREDICTED: hypothetical protein [Homo sapiens]            29   4.5  
gi|239749042 PREDICTED: hypothetical protein [Homo sapiens]            29   4.5  
gi|239743067 PREDICTED: hypothetical protein [Homo sapiens]            29   4.5  
gi|239508713 PREDICTED: hypothetical protein [Homo sapiens]            29   4.5  
gi|213385278 TNF receptor-associated factor 3 interacting protei...    28   5.8  
gi|90991702 leucine-rich repeat kinase 1 [Homo sapiens]                28   5.8  
gi|239749325 PREDICTED: hypothetical protein [Homo sapiens]            28   7.6  
gi|239509122 PREDICTED: hypothetical protein [Homo sapiens]            28   7.6  
gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapi...    28   7.6  
gi|194294556 SET binding protein 1 isoform b [Homo sapiens]            28   7.6  
gi|194294554 SET binding protein 1 isoform a [Homo sapiens]            28   7.6  
gi|148806908 fibronectin type III domain containing 1 [Homo sapi...    28   7.6  
gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo sa...    28   9.9  
gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo sa...    28   9.9  
gi|239745291 PREDICTED: hypothetical protein XP_002343418 isofor...    28   9.9  
gi|239745289 PREDICTED: hypothetical protein XP_002343419 isofor...    28   9.9  

>gi|10047140 partner of NOB1 [Homo sapiens]
          Length = 252

 Score =  496 bits (1277), Expect = e-141
 Identities = 252/252 (100%), Positives = 252/252 (100%)

Query: 1   MESEMETQSARAEEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVF 60
           MESEMETQSARAEEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVF
Sbjct: 1   MESEMETQSARAEEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVF 60

Query: 61  PPLCGDGLLSGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRT 120
           PPLCGDGLLSGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRT
Sbjct: 61  PPLCGDGLLSGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRT 120

Query: 121 CKETKDVSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAI 180
           CKETKDVSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAI
Sbjct: 121 CKETKDVSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAI 180

Query: 181 GRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGN 240
           GRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGN
Sbjct: 181 GRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGN 240

Query: 241 IRAVASRSADRF 252
           IRAVASRSADRF
Sbjct: 241 IRAVASRSADRF 252


>gi|117676403 HIV-1 rev binding protein 2 [Homo sapiens]
          Length = 381

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 3/145 (2%)

Query: 81  PANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAF 140
           P  R   LKE W  +   + EH  +    +L   ++ + T K+T D   + +A D +K  
Sbjct: 65  PKYREAYLKECWPLVQKALNEH-HVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLL 123

Query: 141 ILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRT 200
                 E A+ +++ DD+  +  +I  +   K   + R   R+ G  G T   +E +T  
Sbjct: 124 ARSVSFEQAVRILQ-DDVACDIIKIGSLVRNKERFVKRR-QRLIGPKGSTLKALELLTNC 181

Query: 201 RIVLADVKVHILGSFQNIKMARTAI 225
            I++    V  +G F  +K  R  +
Sbjct: 182 YIMVQGNTVSAIGPFSGLKEVRKVV 206


>gi|238624257 insulin-like growth factor 2 mRNA binding protein 1
           isoform 2 [Homo sapiens]
          Length = 438

 Score = 33.9 bits (76), Expect = 0.14
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 9/60 (15%)

Query: 179 AIGRIAGKGGKTKFTIENVTRTRIVLA---------DVKVHILGSFQNIKMARTAICNLI 229
           A GR+ GKGGKT   ++N+T   +V+           V V I+G F   +MA+  I +++
Sbjct: 359 AAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVKIIGHFYASQMAQRKIRDIL 418


>gi|56237027 insulin-like growth factor 2 mRNA binding protein 1
           isoform 1 [Homo sapiens]
          Length = 577

 Score = 33.9 bits (76), Expect = 0.14
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 9/60 (15%)

Query: 179 AIGRIAGKGGKTKFTIENVTRTRIVLA---------DVKVHILGSFQNIKMARTAICNLI 229
           A GR+ GKGGKT   ++N+T   +V+           V V I+G F   +MA+  I +++
Sbjct: 498 AAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVKIIGHFYASQMAQRKIRDIL 557


>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 31.6 bits (70), Expect = 0.69
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 21 RKGGRRAKKRQAEQLSAAGEGGD-AGRMDTEEARPAKRPVFPP 62
          R   R+ K+  + +LSA+G     +G  +T+EA  A RP FPP
Sbjct: 37 RAARRKTKQGASARLSASGSRSPKSGSSETQEAPSAPRPSFPP 79


>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 31.6 bits (70), Expect = 0.69
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 21 RKGGRRAKKRQAEQLSAAGEGGD-AGRMDTEEARPAKRPVFPP 62
          R   R+ K+  + +LSA+G     +G  +T+EA  A RP FPP
Sbjct: 37 RAARRKTKQGASARLSASGSRSPKSGSSETQEAPSAPRPSFPP 79


>gi|13236585 fibronectin type III and SPRY domain containing 1 [Homo
           sapiens]
          Length = 496

 Score = 31.2 bits (69), Expect = 0.90
 Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 35/164 (21%)

Query: 107 IRFNLKSRNVEIRTCKETKDVSALTKAADFVKAFILGFQVEDALALIRLDDLFLE----S 162
           ++F++K  N  ++ C +               AF+       +   +R+DDL +E     
Sbjct: 235 LKFDMKYMNFRVKACNKAVAGEFSEPVTLETPAFMFRLDASTSHQNLRVDDLSVEWDAMG 294

Query: 163 FEITDVKPLKGDHLSRAIGRI--------------AGKGGKTKFTIENVTRTRIVLADVK 208
            ++ D+K  + D   R    I              +G+GG+ +FT E+ T    VL D  
Sbjct: 295 GKVQDIKAREKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTAESYT----VLGDTL 350

Query: 209 VHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADRF 252
           +     +  ++             P SK +G    VA RS  RF
Sbjct: 351 IDGGEHYWEVRY-----------EPDSKAFG--VGVAYRSLGRF 381


>gi|56118219 insulin-like growth factor 2 mRNA binding protein 2
           isoform b [Homo sapiens]
          Length = 556

 Score = 31.2 bits (69), Expect = 0.90
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 177 SRAIGRIAGKGGKTKFTIENVTRTRIVL---------ADVKVHILGSFQNIKMARTAICN 227
           S   GR+ GKGGKT   ++N+T   +++          +V V I+G F   + A+  I  
Sbjct: 475 SSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIGHFFASQTAQRKIRE 534

Query: 228 LI 229
           ++
Sbjct: 535 IV 536


>gi|64085377 insulin-like growth factor 2 mRNA binding protein 2
           isoform a [Homo sapiens]
          Length = 599

 Score = 31.2 bits (69), Expect = 0.90
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 177 SRAIGRIAGKGGKTKFTIENVTRTRIVL---------ADVKVHILGSFQNIKMARTAICN 227
           S   GR+ GKGGKT   ++N+T   +++          +V V I+G F   + A+  I  
Sbjct: 518 SSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIGHFFASQTAQRKIRE 577

Query: 228 LI 229
           ++
Sbjct: 578 IV 579


>gi|30795212 insulin-like growth factor 2 mRNA binding protein 3
           [Homo sapiens]
          Length = 579

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 177 SRAIGRIAGKGGKTKFTIENVTRTRIVLA---------DVKVHILGSFQNIKMARTAICN 227
           S A GR+ GKGGKT   ++N++   +V+           V V I G F   ++A+  I  
Sbjct: 496 SFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQRKIQE 555

Query: 228 LI 229
           ++
Sbjct: 556 IL 557


>gi|66730423 hypothetical protein LOC389384 [Homo sapiens]
          Length = 652

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 17  TQVTRKGGRRA---KKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVFPPLCGDG 67
           +Q  R   RRA   KK  +++   AG  G A    + EAR  KRP F PLC  G
Sbjct: 432 SQEKRSSFRRAFYHKKHTSKEPRRAGAAGAA----SPEARRPKRPSFLPLCVGG 481


>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 175

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 4/78 (5%)

Query: 11  RAEEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVFPPLCGDGLLS 70
           RA+EG      +  R   +R     +A   G DA R+      P +RP  PP    GL  
Sbjct: 93  RADEGAAAARPERQRVWARRLPGSAAAPAPGRDALRLPPPPPPPPERPRLPPA---GLAG 149

Query: 71  GKEETR-KIPVPANRYTP 87
           G  ++    P PA R  P
Sbjct: 150 GPADSAPPSPAPAPRSRP 167


>gi|31317309 phosphatidylinositol-4-phosphate 5-kinase, type I,
           gamma [Homo sapiens]
          Length = 668

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%)

Query: 105 LQIRFNLKSRNVEIRTCKETKDVSALT-KAADFVK----AFILGFQVEDALA-LIRLDDL 158
           + ++F+LK    + R  K+ K+ S  T K  DF++      +L      AL   ++ D L
Sbjct: 248 MHLKFDLKGSTYKRRASKKEKEKSFPTYKDLDFMQDMPEGLLLDADTFSALVKTLQRDCL 307

Query: 159 FLESFEITDVKPLKGDH 175
            LESF+I D   L G H
Sbjct: 308 VLESFKIMDYSLLLGVH 324


>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
            sapiens]
          Length = 2997

 Score = 29.3 bits (64), Expect = 3.4
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 9    SARAEEGFTQVTRKGGRRAKKRQAEQLSA--AGEGGDAGRMDTEEARPAKRPVFPP 62
            S RA+     + R G   AK   AEQ       +GGD G  D E+  P  +P   P
Sbjct: 1808 SMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRTP 1863


>gi|239754487 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 424

 Score = 28.9 bits (63), Expect = 4.5
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 13  EEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVFPPLCGDGLLSGK 72
           EEG  +  R+GG+  ++ + ++     EGG  G          K  V     G     G+
Sbjct: 206 EEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK---EGR 262

Query: 73  EETRKIPVPAN 83
            E RK+ +P+N
Sbjct: 263 REKRKLAIPSN 273


>gi|239749042 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 424

 Score = 28.9 bits (63), Expect = 4.5
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 13  EEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVFPPLCGDGLLSGK 72
           EEG  +  R+GG+  ++ + ++     EGG  G          K  V     G     G+
Sbjct: 206 EEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK---EGR 262

Query: 73  EETRKIPVPAN 83
            E RK+ +P+N
Sbjct: 263 REKRKLAIPSN 273


>gi|239743067 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 424

 Score = 28.9 bits (63), Expect = 4.5
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 13  EEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVFPPLCGDGLLSGK 72
           EEG  +  R+GG+  ++ + ++     EGG  G          K  V     G     G+
Sbjct: 206 EEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK---EGR 262

Query: 73  EETRKIPVPAN 83
            E RK+ +P+N
Sbjct: 263 REKRKLAIPSN 273


>gi|239508713 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 424

 Score = 28.9 bits (63), Expect = 4.5
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 13  EEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVFPPLCGDGLLSGK 72
           EEG  +  R+GG+  ++ + ++     EGG  G          K  V     G     G+
Sbjct: 206 EEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK---EGR 262

Query: 73  EETRKIPVPAN 83
            E RK+ +P+N
Sbjct: 263 REKRKLAIPSN 273


>gi|213385278 TNF receptor-associated factor 3 interacting protein 1
           isoform 2 [Homo sapiens]
          Length = 625

 Score = 28.5 bits (62), Expect = 5.8
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 7/82 (8%)

Query: 2   ESEMETQSARAEEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVFP 61
           +S+ ET++  +      +T K  +R  K   E  S +   GDAG    +++   + P  P
Sbjct: 323 DSKAETETEISTRASKSLTTKTSKRRSKNSVEGDSTSDAEGDAGPAGQDKSEVPETPEIP 382

Query: 62  PLCGDGLLSGKEETRKIPVPAN 83
                 +       R+IP P +
Sbjct: 383 NELSSNI-------RRIPRPGS 397


>gi|90991702 leucine-rich repeat kinase 1 [Homo sapiens]
          Length = 2015

 Score = 28.5 bits (62), Expect = 5.8
 Identities = 16/44 (36%), Positives = 21/44 (47%)

Query: 2  ESEMETQSARAEEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAG 45
          E  MET +   + G    TR G   A+ R+ E + AA   GD G
Sbjct: 25 ERAMETLNGAGDTGGKPSTRGGDPAARSRRTEGIRAAYRRGDRG 68


>gi|239749325 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 155

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 4/46 (8%)

Query: 21  RKGGRRAKKRQAEQLSAAGEGG----DAGRMDTEEARPAKRPVFPP 62
           R+GG + + R     +  G  G     AG    E ARP  RP  PP
Sbjct: 106 RRGGGKEESRPGTAAAPGGRAGLYPRAAGPASREPARPTHRPRAPP 151


>gi|239509122 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 155

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 4/46 (8%)

Query: 21  RKGGRRAKKRQAEQLSAAGEGG----DAGRMDTEEARPAKRPVFPP 62
           R+GG + + R     +  G  G     AG    E ARP  RP  PP
Sbjct: 106 RRGGGKEESRPGTAAAPGGRAGLYPRAAGPASREPARPTHRPRAPP 151


>gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo
           sapiens]
          Length = 1435

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 15  GFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVFP--PLCGDG 67
           G +  T   G R K    E +   G+G    RM  E ++PA +  FP  PL G+G
Sbjct: 915 GTSTPTNTRGTRVKCMANEVMEDPGQGSSMARM--EASQPAPKGNFPSMPLVGEG 967


>gi|194294556 SET binding protein 1 isoform b [Homo sapiens]
          Length = 242

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 33 EQLSAAGEGGDAGRMDTEEARPAKRPVFPPLCGDGLLSGKEETRKIPVPANRYTPLKEN 91
          E LS++ + G  G  D      AK P  P   G+ LLS     + IPV   R  P +E+
Sbjct: 5  ETLSSSRQRG--GESDFLPVSSAKPPAAPGCAGEPLLSTPGPGKGIPVGGERMEPEEED 61


>gi|194294554 SET binding protein 1 isoform a [Homo sapiens]
          Length = 1596

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 33 EQLSAAGEGGDAGRMDTEEARPAKRPVFPPLCGDGLLSGKEETRKIPVPANRYTPLKEN 91
          E LS++ + G  G  D      AK P  P   G+ LLS     + IPV   R  P +E+
Sbjct: 5  ETLSSSRQRG--GESDFLPVSSAKPPAAPGCAGEPLLSTPGPGKGIPVGGERMEPEEED 61


>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
          Length = 1894

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 16/54 (29%), Positives = 22/54 (40%)

Query: 3    SEMETQSARAEEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAK 56
            +E+E Q  RA     +         K +Q E  + AG GGD        A PA+
Sbjct: 1084 TEVEAQDVRAPAHAARAKEAAASLPKHQQVESPTGAGAGGDHRSQRGHAASPAR 1137


>gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo
           sapiens]
          Length = 185

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 27  AKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVFP 61
           A K Q   ++  GEG   G +D+E+  P   P  P
Sbjct: 70  AAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIP 104


>gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo
           sapiens]
          Length = 230

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 27  AKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVFP 61
           A K Q   ++  GEG   G +D+E+  P   P  P
Sbjct: 70  AAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIP 104


>gi|239745291 PREDICTED: hypothetical protein XP_002343418 isoform 1
           [Homo sapiens]
          Length = 185

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 27  AKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVFP 61
           A K Q   ++  GEG   G +D+E+  P   P  P
Sbjct: 70  AAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIP 104


>gi|239745289 PREDICTED: hypothetical protein XP_002343419 isoform 2
           [Homo sapiens]
          Length = 230

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 27  AKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVFP 61
           A K Q   ++  GEG   G +D+E+  P   P  P
Sbjct: 70  AAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIP 104


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,830,731
Number of Sequences: 37866
Number of extensions: 382672
Number of successful extensions: 1310
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1285
Number of HSP's gapped (non-prelim): 42
length of query: 252
length of database: 18,247,518
effective HSP length: 100
effective length of query: 152
effective length of database: 14,460,918
effective search space: 2198059536
effective search space used: 2198059536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.