Guide to the Human Genome
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Search of human proteins with 17865814

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|17865814 vanin 2 isoform 1 precursor [Homo sapiens]
         (520 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17865814 vanin 2 isoform 1 precursor [Homo sapiens]               1070   0.0  
gi|17865816 vanin 2 isoform 2 [Homo sapiens]                          971   0.0  
gi|223633991 vanin 1 precursor [Homo sapiens]                         663   0.0  
gi|4557373 biotinidase precursor [Homo sapiens]                       358   7e-99
gi|66932888 vanin 3 isoform 1 precursor [Homo sapiens]                347   2e-95
gi|66932890 vanin 3 isoform 3 precursor [Homo sapiens]                179   5e-45
gi|17865819 vanin 3 isoform 2 precursor [Homo sapiens]                179   5e-45
gi|9910460 nitrilase family, member 2 [Homo sapiens]                   52   2e-06
gi|5031947 nitrilase 1 [Homo sapiens]                                  34   0.28 
gi|32698962 glycerophosphodiester phosphodiesterase domain conta...    31   2.4  
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa...    30   4.1  
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap...    30   4.1  
gi|7706509 beta-ureidopropionase [Homo sapiens]                        30   7.0  

>gi|17865814 vanin 2 isoform 1 precursor [Homo sapiens]
          Length = 520

 Score = 1070 bits (2768), Expect = 0.0
 Identities = 520/520 (100%), Positives = 520/520 (100%)

Query: 1   MVTSSFPISVAVFALITLQVGTQDSFIAAVYEHAVILPNKTETPVSQEDALNLMNENIDI 60
           MVTSSFPISVAVFALITLQVGTQDSFIAAVYEHAVILPNKTETPVSQEDALNLMNENIDI
Sbjct: 1   MVTSSFPISVAVFALITLQVGTQDSFIAAVYEHAVILPNKTETPVSQEDALNLMNENIDI 60

Query: 61  LETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDPHRFGHTP 120
           LETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDPHRFGHTP
Sbjct: 61  LETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDPHRFGHTP 120

Query: 121 VQARLSCLAKDNSIYVLANLGDKKPCNSRDSTCPPNGYFQYNTNVVYNTEGKLVARYHKY 180
           VQARLSCLAKDNSIYVLANLGDKKPCNSRDSTCPPNGYFQYNTNVVYNTEGKLVARYHKY
Sbjct: 121 VQARLSCLAKDNSIYVLANLGDKKPCNSRDSTCPPNGYFQYNTNVVYNTEGKLVARYHKY 180

Query: 181 HLYSEPQFNVPEKPELVTFNTAFGRFGIFTCFDIFFYDPGVTLVKDFHVDTILFPTAWMN 240
           HLYSEPQFNVPEKPELVTFNTAFGRFGIFTCFDIFFYDPGVTLVKDFHVDTILFPTAWMN
Sbjct: 181 HLYSEPQFNVPEKPELVTFNTAFGRFGIFTCFDIFFYDPGVTLVKDFHVDTILFPTAWMN 240

Query: 241 VLPLLTAIEFHSAWAMGMGVNLLVANTHHVSLNMTGSGIYAPNGPKVYHYDMKTELGKLL 300
           VLPLLTAIEFHSAWAMGMGVNLLVANTHHVSLNMTGSGIYAPNGPKVYHYDMKTELGKLL
Sbjct: 241 VLPLLTAIEFHSAWAMGMGVNLLVANTHHVSLNMTGSGIYAPNGPKVYHYDMKTELGKLL 300

Query: 301 LSEVDSHPLSSLAYPTAVNWNAYATTIKPFPVQKNTFRGFISRDGFNFTELFENAGNLTV 360
           LSEVDSHPLSSLAYPTAVNWNAYATTIKPFPVQKNTFRGFISRDGFNFTELFENAGNLTV
Sbjct: 301 LSEVDSHPLSSLAYPTAVNWNAYATTIKPFPVQKNTFRGFISRDGFNFTELFENAGNLTV 360

Query: 361 CQKELCCHLSYRMLQKEENEVYVLGAFTGLHGRRRREYWQVCTMLKCKTTNLTTCGRPVE 420
           CQKELCCHLSYRMLQKEENEVYVLGAFTGLHGRRRREYWQVCTMLKCKTTNLTTCGRPVE
Sbjct: 361 CQKELCCHLSYRMLQKEENEVYVLGAFTGLHGRRRREYWQVCTMLKCKTTNLTTCGRPVE 420

Query: 421 TASTRFEMFSLSGTFGTEYVFPEVLLTEIHLSPGKFEVLKDGRLVNKNGSSGPILTVSLF 480
           TASTRFEMFSLSGTFGTEYVFPEVLLTEIHLSPGKFEVLKDGRLVNKNGSSGPILTVSLF
Sbjct: 421 TASTRFEMFSLSGTFGTEYVFPEVLLTEIHLSPGKFEVLKDGRLVNKNGSSGPILTVSLF 480

Query: 481 GRWYTKDSLYSSCGTSNSAITYLLIFILLMIIALQNIVML 520
           GRWYTKDSLYSSCGTSNSAITYLLIFILLMIIALQNIVML
Sbjct: 481 GRWYTKDSLYSSCGTSNSAITYLLIFILLMIIALQNIVML 520


>gi|17865816 vanin 2 isoform 2 [Homo sapiens]
          Length = 467

 Score =  971 bits (2511), Expect = 0.0
 Identities = 467/467 (100%), Positives = 467/467 (100%)

Query: 54  MNENIDILETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDP 113
           MNENIDILETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDP
Sbjct: 1   MNENIDILETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDP 60

Query: 114 HRFGHTPVQARLSCLAKDNSIYVLANLGDKKPCNSRDSTCPPNGYFQYNTNVVYNTEGKL 173
           HRFGHTPVQARLSCLAKDNSIYVLANLGDKKPCNSRDSTCPPNGYFQYNTNVVYNTEGKL
Sbjct: 61  HRFGHTPVQARLSCLAKDNSIYVLANLGDKKPCNSRDSTCPPNGYFQYNTNVVYNTEGKL 120

Query: 174 VARYHKYHLYSEPQFNVPEKPELVTFNTAFGRFGIFTCFDIFFYDPGVTLVKDFHVDTIL 233
           VARYHKYHLYSEPQFNVPEKPELVTFNTAFGRFGIFTCFDIFFYDPGVTLVKDFHVDTIL
Sbjct: 121 VARYHKYHLYSEPQFNVPEKPELVTFNTAFGRFGIFTCFDIFFYDPGVTLVKDFHVDTIL 180

Query: 234 FPTAWMNVLPLLTAIEFHSAWAMGMGVNLLVANTHHVSLNMTGSGIYAPNGPKVYHYDMK 293
           FPTAWMNVLPLLTAIEFHSAWAMGMGVNLLVANTHHVSLNMTGSGIYAPNGPKVYHYDMK
Sbjct: 181 FPTAWMNVLPLLTAIEFHSAWAMGMGVNLLVANTHHVSLNMTGSGIYAPNGPKVYHYDMK 240

Query: 294 TELGKLLLSEVDSHPLSSLAYPTAVNWNAYATTIKPFPVQKNTFRGFISRDGFNFTELFE 353
           TELGKLLLSEVDSHPLSSLAYPTAVNWNAYATTIKPFPVQKNTFRGFISRDGFNFTELFE
Sbjct: 241 TELGKLLLSEVDSHPLSSLAYPTAVNWNAYATTIKPFPVQKNTFRGFISRDGFNFTELFE 300

Query: 354 NAGNLTVCQKELCCHLSYRMLQKEENEVYVLGAFTGLHGRRRREYWQVCTMLKCKTTNLT 413
           NAGNLTVCQKELCCHLSYRMLQKEENEVYVLGAFTGLHGRRRREYWQVCTMLKCKTTNLT
Sbjct: 301 NAGNLTVCQKELCCHLSYRMLQKEENEVYVLGAFTGLHGRRRREYWQVCTMLKCKTTNLT 360

Query: 414 TCGRPVETASTRFEMFSLSGTFGTEYVFPEVLLTEIHLSPGKFEVLKDGRLVNKNGSSGP 473
           TCGRPVETASTRFEMFSLSGTFGTEYVFPEVLLTEIHLSPGKFEVLKDGRLVNKNGSSGP
Sbjct: 361 TCGRPVETASTRFEMFSLSGTFGTEYVFPEVLLTEIHLSPGKFEVLKDGRLVNKNGSSGP 420

Query: 474 ILTVSLFGRWYTKDSLYSSCGTSNSAITYLLIFILLMIIALQNIVML 520
           ILTVSLFGRWYTKDSLYSSCGTSNSAITYLLIFILLMIIALQNIVML
Sbjct: 421 ILTVSLFGRWYTKDSLYSSCGTSNSAITYLLIFILLMIIALQNIVML 467


>gi|223633991 vanin 1 precursor [Homo sapiens]
          Length = 513

 Score =  663 bits (1711), Expect = 0.0
 Identities = 321/513 (62%), Positives = 394/513 (76%), Gaps = 9/513 (1%)

Query: 2   VTSSFPISVAVFALITLQVGTQDSFIAAVYEHAVILPNKTETPVSQEDALNLMNENIDIL 61
           +T+  P  VA+      +   QD+F AAVYEHA ILPN T TPVS+E+AL LMN N+DIL
Sbjct: 1   MTTQLPAYVAILLFYVSRASCQDTFTAAVYEHAAILPNATLTPVSREEALALMNRNLDIL 60

Query: 62  ETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDPHRFGHTPV 121
           E AI  AA+QGA IIVTPEDA+YGW F R++++PYLEDIPDP+VNWIPC + +RFG TPV
Sbjct: 61  EGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPV 120

Query: 122 QARLSCLAKDNSIYVLANLGDKKPCNSRDSTCPPNGYFQYNTNVVYNTEGKLVARYHKYH 181
           Q RLSCLAK+NSIYV+AN+GDKKPC++ D  CPP+G +QYNT+VV++++GKLVARYHK +
Sbjct: 121 QERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQN 180

Query: 182 LY-SEPQFNVPEKPELVTFNTAFGRFGIFTCFDIFFYDPGVTLVKDFHVDTILFPTAWMN 240
           L+  E QFNVP++PE+VTFNT FG FGIFTCFDI F+DP VTLVKDFHVDTI+FPTAWMN
Sbjct: 181 LFMGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMN 240

Query: 241 VLPLLTAIEFHSAWAMGMGVNLLVANTHHVSLNMTGSGIYAPNGPKVYHYDMKTELGKLL 300
           VLP L+A+EFHSAWAMGM VN L +N H+ S  MTGSGIYAPN  + +HYDMKTE GKLL
Sbjct: 241 VLPHLSAVEFHSAWAMGMRVNFLASNIHYPSKKMTGSGIYAPNSSRAFHYDMKTEEGKLL 300

Query: 301 LSEVDSHPLSSLAYPTAVNWNAYATTIKPFPVQKNTFRGFISRDGFNFTELFENAGNLTV 360
           LS++DSHP    ++   VNW +YA++I+        F+G +  D F F +L   AGN TV
Sbjct: 301 LSQLDSHP----SHSAVVNWTSYASSIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTV 356

Query: 361 CQKELCCHLSYRMLQKEENEVYVLGAFTGLHGRRRREYWQVCTMLKCKTTNLTTCGRPVE 420
           CQK+LCCHLSY+M +   NEVY LGAF GLH    R Y Q+CT+LKCKTTNL TCG   E
Sbjct: 357 CQKDLCCHLSYKMSENIPNEVYALGAFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAE 416

Query: 421 TASTRFEMFSLSGTFGTEYVFPEVLLTEIHLSPGKFEVLKDGRLVNKNGSSGPILTVSLF 480
           TASTRFEMFSLSGTFGT+YVFPEVLL+E  L+PG+F+V  DGRL +   +SGP+LTV+LF
Sbjct: 417 TASTRFEMFSLSGTFGTQYVFPEVLLSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLF 476

Query: 481 GRWYTKDSLYSSCGTSNSAITYLLIFILLMIIA 513
           GR Y KD        ++S +T     I+L++IA
Sbjct: 477 GRLYEKD----WASNASSGLTAQARIIMLIVIA 505


>gi|4557373 biotinidase precursor [Homo sapiens]
          Length = 543

 Score =  358 bits (919), Expect = 7e-99
 Identities = 193/489 (39%), Positives = 282/489 (57%), Gaps = 30/489 (6%)

Query: 26  FIAAVYEHAVILPNKTETPVSQEDALNLMNENIDILETAIKQAAEQGARIIVTPEDALYG 85
           ++AAVYEH  IL       +S+++AL LMN+N+DI E  +  AA++  +IIV PED ++G
Sbjct: 58  YVAAVYEHPSILSLNPLALISRQEALELMNQNLDIYEQQVMTAAQKDVQIIVFPEDGIHG 117

Query: 86  WKFTRETVFPYLEDIPDPQV-NWIPCQDPHRFGHTPVQARLSCLAKDNSIYVLANLGDKK 144
           + FTR +++P+L+ +P PQV  W PC +PHRF  T V  RLSC+A    ++++ANLG K+
Sbjct: 118 FNFTRTSIYPFLDFMPSPQVVRWNPCLEPHRFNDTEVLQRLSCMAIRGDMFLVANLGTKE 177

Query: 145 PCNSRDSTCPPNGYFQYNTNVVYNTEGKLVARYHKYHLYSEPQFNVPEKPELVTFNTAF- 203
           PC+S D  CP +G +Q+NTNVV++  G LV RY K++LY E  F+VP K +L+TF+T F 
Sbjct: 178 PCHSSDPRCPKDGRYQFNTNVVFSNNGTLVDRYRKHNLYFEAAFDVPLKVDLITFDTPFA 237

Query: 204 GRFGIFTCFDIFFYDPGVTLVKDFHVDTILFPTAWMNVLPLLTAIEFHSAWAMGMGVNLL 263
           GRFGIFTCFDI F+DP + +++D+ V  +++PTAWMN LPLL AIE   A+A+  G+N+L
Sbjct: 238 GRFGIFTCFDILFFDPAIRVLRDYKVKHVVYPTAWMNQLPLLAAIEIQKAFAVAFGINVL 297

Query: 264 VANTHHVSLNMTGSGIYAPNGPKVYHYDMKTELGKLLLSEVDSHPLSSLAYPTAV----- 318
            AN HH  L MTGSGI+ P     YH DM+     L++++V  +P+  +    A      
Sbjct: 298 AANVHHPVLGMTGSGIHTPLESFWYH-DMENPKSHLIIAQVAKNPVGLIGAENATGETDP 356

Query: 319 NWNAYATTIKPFPVQKN-------------------TFRGFISRDGFNFTELFENAGNLT 359
           + + +   +   P  +                    TF   +  D F    ++   G L 
Sbjct: 357 SHSKFLKILSGDPYCEKDAQEVHCDEATKWNVNAPPTFHSEMMYDNFTLVPVWGKEGYLH 416

Query: 360 VCQKELCCHLSYRMLQKEENEVYVLGAFTGLHGRRRREYWQVCTMLKCKTTNLTTCGRPV 419
           VC   LCC+L Y        E+Y LG F GLH      Y QVC +++C      TCG+ +
Sbjct: 417 VCSNGLCCYLLYER-PTLSKELYALGVFDGLHTVHGTYYIQVCALVRCGGLGFDTCGQEI 475

Query: 420 ETASTRFEMFSLSGTFGTEYVFPEVLLTEIHLS-PGKFEVLKDGRLVNKNGSSGPILTVS 478
             A+  FE F L G F T Y+FP  L + + L  P +     D   + K+  S  ++T +
Sbjct: 476 TEATGIFE-FHLWGNFSTSYIFPLFLTSGMTLEVPDQLGWENDHYFLRKSRLSSGLVTAA 534

Query: 479 LFGRWYTKD 487
           L+GR Y +D
Sbjct: 535 LYGRLYERD 543


>gi|66932888 vanin 3 isoform 1 precursor [Homo sapiens]
          Length = 274

 Score =  347 bits (890), Expect = 2e-95
 Identities = 162/236 (68%), Positives = 200/236 (84%), Gaps = 1/236 (0%)

Query: 1   MVTSSFPISVAVFALITLQVGTQDSFIAAVYEHAVILPNKTETPVSQEDALNLMNENIDI 60
           M+ S FP  VAVFAL+ L VG  D+FIAAVYEHAVILPN+TETPVS+E+AL LMN+NID+
Sbjct: 1   MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60

Query: 61  LETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDPHRFGHTP 120
           LE A+K AA+QGA IIVTPED +YGW FTRE+++PYLEDIPDP VNWIPC+DP RFG+TP
Sbjct: 61  LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRFGNTP 120

Query: 121 VQARLSCLAKDNSIYVLANLGDKKPCNSRDSTCPPNGYFQYNTNVVYNTEGKLVARYHKY 180
           VQ RLSCLAKDNSIYV+AN+GDKKPCN+ DS CPP+G +QYNT+VV++++GKL+ARYHKY
Sbjct: 121 VQQRLSCLAKDNSIYVVANIGDKKPCNASDSQCPPDGRYQYNTDVVFDSQGKLLARYHKY 180

Query: 181 HLYS-EPQFNVPEKPELVTFNTAFGRFGIFTCFDIFFYDPGVTLVKDFHVDTILFP 235
           +L++ E QF+ P+  ELVTF+T FG+FGIFTCFDIF +DP V +V +F +     P
Sbjct: 181 NLFAPEIQFDFPKDSELVTFDTPFGKFGIFTCFDIFSHDPAVVVVDEFQLTAFSTP 236


>gi|66932890 vanin 3 isoform 3 precursor [Homo sapiens]
          Length = 117

 Score =  179 bits (454), Expect = 5e-45
 Identities = 84/115 (73%), Positives = 99/115 (86%)

Query: 1   MVTSSFPISVAVFALITLQVGTQDSFIAAVYEHAVILPNKTETPVSQEDALNLMNENIDI 60
           M+ S FP  VAVFAL+ L VG  D+FIAAVYEHAVILPN+TETPVS+E+AL LMN+NID+
Sbjct: 1   MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60

Query: 61  LETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDPHR 115
           LE A+K AA+QGA IIVTPED +YGW FTRE+++PYLEDIPDP VNWIPC+DP R
Sbjct: 61  LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWR 115


>gi|17865819 vanin 3 isoform 2 precursor [Homo sapiens]
          Length = 147

 Score =  179 bits (454), Expect = 5e-45
 Identities = 84/115 (73%), Positives = 99/115 (86%)

Query: 1   MVTSSFPISVAVFALITLQVGTQDSFIAAVYEHAVILPNKTETPVSQEDALNLMNENIDI 60
           M+ S FP  VAVFAL+ L VG  D+FIAAVYEHAVILPN+TETPVS+E+AL LMN+NID+
Sbjct: 1   MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60

Query: 61  LETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDPHR 115
           LE A+K AA+QGA IIVTPED +YGW FTRE+++PYLEDIPDP VNWIPC+DP R
Sbjct: 61  LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWR 115


>gi|9910460 nitrilase family, member 2 [Homo sapiens]
          Length = 276

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 49/179 (27%)

Query: 52  NLMNENIDILETAIKQAAEQGARIIVTPE--DALYGWKFTRETVFPYLEDIPDPQVNWIP 109
           ++ ++N+    + I++AA QGA+I+  PE  ++ YG K+  E    Y E IP        
Sbjct: 15  SIKSDNVTRACSFIREAATQGAKIVSLPECFNSPYGAKYFPE----YAEKIPGESTQ--- 67

Query: 110 CQDPHRFGHTPVQARLSCLAKDNSIYVLANLGDKKPCNSRDSTCPPNGYFQYNTNVVYNT 169
                         +LS +AK+ SIY++     ++                YNT  V+  
Sbjct: 68  --------------KLSEVAKECSIYLIGGSIPEEDAGKL-----------YNTCAVFGP 102

Query: 170 EGKLVARYHKYHLYSEPQFNVPEK------------PELVTFNTAFGRFGIFTCFDIFF 216
           +G L+A+Y K HL+     +VP K                TF+T + R G+  C+D+ F
Sbjct: 103 DGTLLAKYRKIHLF---DIDVPGKITFQESKTLSPGDSFSTFDTPYCRVGLGICYDMRF 158


>gi|5031947 nitrilase 1 [Homo sapiens]
          Length = 327

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 161 YNTNVVYNTEGKLVARYHKYHL----------YSEPQFNVPEKPELVTFNTAFGRFGIFT 210
           YN +V+ N++G +VA Y K HL            E    +P        +T  G+ G+  
Sbjct: 143 YNCHVLLNSKGAVVATYRKTHLCDVEIPGQGPMCESNSTMPGPSLESPVSTPAGKIGLAV 202

Query: 211 CFDIFFYDPGVTLVKDFHVDTILFPTAWMNV 241
           C+D+ F +  + L +    + + +P+A+ ++
Sbjct: 203 CYDMRFPELSLALAQ-AGAEILTYPSAFGSI 232


>gi|32698962 glycerophosphodiester phosphodiesterase domain
           containing 1 [Homo sapiens]
          Length = 314

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 10/88 (11%)

Query: 110 CQDPHRFGHTPV--QARLSCLAKDNSIYVLANLGDKKPCNSRDSTCPPNGYFQYNTNVVY 167
           C+ P   G   V  Q    C  KDN I +L  + +  P        P N   + N NV+ 
Sbjct: 107 CELPPYLGKLDVSFQRACQCEGKDNRIPLLKEVFEAFP------NTPINIDIKVNNNVLI 160

Query: 168 NTEGKLVARYHKYHL--YSEPQFNVPEK 193
               +LV RY++ HL  +    + + EK
Sbjct: 161 KKVSELVKRYNREHLTVWGNANYEIVEK 188


>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
           sapiens]
          Length = 1135

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 10/159 (6%)

Query: 40  KTETPVSQEDALNLMNENIDILETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLED 99
           KTE P++++  L L N N+   +     +  +   + +   +     K   E    +LE 
Sbjct: 553 KTEAPLAKDGVLTLAN-NVTPAKDVPPLSETEATPVPIKDMEIAQTQKGISED--SHLES 609

Query: 100 IPDPQVNWIPCQDPHRFGHTPVQARLSCLAKDNSIYVLANLGDKKPCNSRDSTCPPNGYF 159
           + D   +  P         T    + S  A+++S  VL  LG++KPCNS+     P+   
Sbjct: 610 LQDVGQSAAPTFMISPETVTGTGKKCSLPAEEDS--VLEKLGERKPCNSQ-----PSELS 662

Query: 160 QYNTNVVYNTEGKLVARYHKYHLYSEPQFNVPEKPELVT 198
              + +    EG+ V       + + P   +P  PE  T
Sbjct: 663 SETSGIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKT 701


>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo
           sapiens]
          Length = 1152

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 10/159 (6%)

Query: 40  KTETPVSQEDALNLMNENIDILETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLED 99
           KTE P++++  L L N N+   +     +  +   + +   +     K   E    +LE 
Sbjct: 553 KTEAPLAKDGVLTLAN-NVTPAKDVPPLSETEATPVPIKDMEIAQTQKGISED--SHLES 609

Query: 100 IPDPQVNWIPCQDPHRFGHTPVQARLSCLAKDNSIYVLANLGDKKPCNSRDSTCPPNGYF 159
           + D   +  P         T    + S  A+++S  VL  LG++KPCNS+     P+   
Sbjct: 610 LQDVGQSAAPTFMISPETVTGTGKKCSLPAEEDS--VLEKLGERKPCNSQ-----PSELS 662

Query: 160 QYNTNVVYNTEGKLVARYHKYHLYSEPQFNVPEKPELVT 198
              + +    EG+ V       + + P   +P  PE  T
Sbjct: 663 SETSGIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKT 701


>gi|7706509 beta-ureidopropionase [Homo sapiens]
          Length = 384

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 14/90 (15%)

Query: 128 LAKDNSIYVLANLGDKKPCNSRDSTCPPNGYFQYNTNVVYNTEGKLVARYHKYHL----- 182
           LAK++ + V++      P   RDS    +G   +NT VV +  G ++ +  K H+     
Sbjct: 154 LAKNHDMVVVS------PILERDSE---HGDVLWNTAVVISNSGAVLGKTRKNHIPRVGD 204

Query: 183 YSEPQFNVPEKPELVTFNTAFGRFGIFTCF 212
           ++E  + +        F T FGR  +  C+
Sbjct: 205 FNESTYYMEGNLGHPVFQTQFGRIAVNICY 234


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,247,333
Number of Sequences: 37866
Number of extensions: 929259
Number of successful extensions: 1806
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1788
Number of HSP's gapped (non-prelim): 15
length of query: 520
length of database: 18,247,518
effective HSP length: 107
effective length of query: 413
effective length of database: 14,195,856
effective search space: 5862888528
effective search space used: 5862888528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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