Guide to the Human Genome
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Name: SERPIND1 Sequence: fasta or formatted (499aa) NCBI GI: 73858566
Description:

heparin cofactor II precursor

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         24           2
 C cysteine            0.6          3           1
 D aspartate           6.2         31           3
 E glutamate           5.6         28           2
 F phenylalanine       6.0         30           1
 G glycine             5.2         26           2
 H histidine           2.8         14           1
 I isoleucine          7.0         35           2
 K lysine              6.6         33           1
 L leucine            10.8         54           2
 M methionine          3.8         19           2
 N asparagine          6.6         33           2
 P proline             3.4         17           1
 Q glutamine           4.2         21           1
 R arginine            4.4         22           2
 S serine              6.2         31           2
 T threonine           6.4         32           2
 V valine              5.8         29           2
 W tryptophan          1.0          5           1
 Y tyrosine            2.4         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heparin cofactor II precursor 
SERPINA9              0.190   serine (or cysteine) proteinase inhibitor, clade A ...
SERPINB1              0.178   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB3              0.168   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB4              0.166   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINA1              0.162   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.162   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.162   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.162   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.162   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.162   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.162   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.162   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.162   serine proteinase inhibitor, clade A, member 1 [Homo...
SERPINA1              0.162   serine proteinase inhibitor, clade A, member 1 [Homo...
SERPINA1              0.162   serine proteinase inhibitor, clade A, member 1 [Homo...
SERPINA6              0.161   corticosteroid binding globulin precursor 
SERPINB8              0.160   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB8              0.160   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINA10             0.160   serine (or cysteine) proteinase inhibitor, clade A ...
SERPINA10             0.160   serine (or cysteine) proteinase inhibitor, clade A (a...
SERPINA3              0.160   serpin peptidase inhibitor, clade A, member 3 precur...
SERPINB2              0.159   serine (or cysteine) proteinase inhibitor, clade B ...
SERPINB2              0.159   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINI1              0.156   neuroserpin precursor 
SERPINI1              0.156   neuroserpin precursor 
SERPINB6              0.155   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB9              0.153   serpin peptidase inhibitor, clade B, member 9 
SERPINB11             0.153   serpin peptidase inhibitor, clade B, member 11 [Hom...
SERPINC1              0.152   serpin peptidase inhibitor, clade C, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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