Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SERPINB13 Sequence: fasta or formatted (391aa) NCBI GI: 8393956
Description:

serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 13

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         22           4
 C cysteine            0.3          1           1
 D aspartate           4.9         19           1
 E glutamate           9.5         37           2
 F phenylalanine       7.4         29           2
 G glycine             6.1         24           1
 H histidine           3.1         12           1
 I isoleucine          4.9         19           2
 K lysine              8.4         33           2
 L leucine             9.0         35           2
 M methionine          2.8         11           2
 N asparagine          5.1         20           2
 P proline             2.8         11           1
 Q glutamine           2.6         10           2
 R arginine            2.6         10           1
 S serine              9.5         37           3
 T threonine           5.9         23           1
 V valine              5.9         23           1
 W tryptophan          1.0          4           1
 Y tyrosine            2.8         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine (or cysteine) proteinase inhibitor, clade B (o... 
SERPINB3              0.571   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB4              0.567   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB10             0.417   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB1              0.413   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB11             0.399   serpin peptidase inhibitor, clade B, member 11 [Hom...
SERPINB12             0.390   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB6              0.386   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB9              0.367   serpin peptidase inhibitor, clade B, member 9 
SERPINB8              0.342   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB8              0.342   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB2              0.342   serine (or cysteine) proteinase inhibitor, clade B ...
SERPINB2              0.342   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB7              0.326   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB7              0.326   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB5              0.291   serine (or cysteine) proteinase inhibitor, clade B ...
SERPINC1              0.269   serpin peptidase inhibitor, clade C, member 1 
SERPINI2              0.240   serpin peptidase inhibitor, clade I (pancpin), member...
SERPINI1              0.215   neuroserpin precursor 
SERPINI1              0.215   neuroserpin precursor 
SERPINA5              0.214   serine (or cysteine) proteinase inhibitor, clade A ...
SERPINA3              0.202   serpin peptidase inhibitor, clade A, member 3 precur...
SERPINA1              0.193   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.193   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.193   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.193   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.193   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.193   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.193   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.193   serine proteinase inhibitor, clade A, member 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press