Guide to the Human Genome
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Name: ABCD3 Sequence: fasta or formatted (236aa) NCBI GI: 169881286
Description:

ATP-binding cassette, sub-family D, member 3 isoform b

Referenced in:

ATP-binding Cassette Proteins
Peroxisomes

Other entries for this name:
alt prot [659aa] ATP-binding cassette, sub-family D, member 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         15           2
 C cysteine            2.1          5           1
 D aspartate           3.4          8           1
 E glutamate           3.8          9           2
 F phenylalanine       5.5         13           2
 G glycine             5.5         13           1
 H histidine           1.3          3           1
 I isoleucine          6.4         15           2
 K lysine              8.9         21           2
 L leucine            15.7         37           3
 M methionine          2.5          6           1
 N asparagine          5.5         13           2
 P proline             2.5          6           2
 Q glutamine           3.0          7           1
 R arginine            5.9         14           3
 S serine              5.5         13           2
 T threonine           3.8          9           1
 V valine              6.4         15           2
 W tryptophan          0.8          2           1
 Y tyrosine            5.1         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP-binding cassette, sub-family D, member 3 isofor... 
ABCD3                 0.960   ATP-binding cassette, sub-family D, member 3 isoform ...
ABCD2                 0.220   ATP-binding cassette, sub-family D, member 2 
ABCD1                 0.216   ATP-binding cassette, sub-family D (ALD), member 1 [H...
ABCD4                 0.103   ATP-binding cassette, sub-family D, member 4 
LRRC8B                0.011   leucine rich repeat containing 8 family, member B [...
LRRC8B                0.011   leucine rich repeat containing 8 family, member B [H...
GNRHR                 0.009   gonadotropin-releasing hormone receptor isoform 1 [Ho...
BEST1                 0.007   bestrophin 1 isoform 1 
IQCJ                  0.007   IQ motif containing J isoform CaMBPv1 
FBXO3                 0.007   F-box only protein 3 isoform 1 
FBXO3                 0.007   F-box only protein 3 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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