Search of human proteins with 16933537

Search of human proteins with 16933537

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|16933537 glomulin [Homo sapiens]
         (594 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|16933537 glomulin [Homo sapiens]                                  1175   0.0  
gi|122937396 coiled-coil domain containing 150 [Homo sapiens]          35   0.19 
gi|21914927 helicase, lymphoid-specific [Homo sapiens]                 32   1.7  
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     31   3.7  
gi|222352143 TBC1 domain family, member 2 [Homo sapiens]               30   4.8  
gi|57863263 testis expressed sequence 14 isoform a [Homo sapiens]      30   4.8  
gi|57863261 testis expressed sequence 14 isoform b [Homo sapiens]      30   4.8  
gi|70906435 fibrinogen, beta chain preproprotein [Homo sapiens]        30   6.3  
gi|22749191 tetratricopeptide repeat domain 39B [Homo sapiens]         30   6.3  
gi|38348382 spermatogenesis associated 21 [Homo sapiens]               30   6.3  
gi|188595687 gamma filamin isoform b [Homo sapiens]                    30   8.2  
gi|116805322 gamma filamin isoform a [Homo sapiens]                    30   8.2  
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa...    30   8.2  
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s...    30   8.2  

>gi|16933537 glomulin [Homo sapiens]
          Length = 594

 Score = 1175 bits (3040), Expect = 0.0
 Identities = 594/594 (100%), Positives = 594/594 (100%)

Query: 1   MAVEELQSIIKRCQILEEQDFKEEDFGLFQLAGQRCIEEGHTDQLLEIIQNEKNKVIIKN 60
           MAVEELQSIIKRCQILEEQDFKEEDFGLFQLAGQRCIEEGHTDQLLEIIQNEKNKVIIKN
Sbjct: 1   MAVEELQSIIKRCQILEEQDFKEEDFGLFQLAGQRCIEEGHTDQLLEIIQNEKNKVIIKN 60

Query: 61  MGWNLVGPVVRCLLCKDKEDSKRKVYFLIFDLLVKLCNPKELLLGLLELIEEPSGKQISQ 120
           MGWNLVGPVVRCLLCKDKEDSKRKVYFLIFDLLVKLCNPKELLLGLLELIEEPSGKQISQ
Sbjct: 61  MGWNLVGPVVRCLLCKDKEDSKRKVYFLIFDLLVKLCNPKELLLGLLELIEEPSGKQISQ 120

Query: 121 SILLLLQPLQTVIQKLHNKAYSIGLALSTLWNQLSLLPVPYSKEQIQMDDYGLCQCCKAL 180
           SILLLLQPLQTVIQKLHNKAYSIGLALSTLWNQLSLLPVPYSKEQIQMDDYGLCQCCKAL
Sbjct: 121 SILLLLQPLQTVIQKLHNKAYSIGLALSTLWNQLSLLPVPYSKEQIQMDDYGLCQCCKAL 180

Query: 181 IEFTKPFVEEVIDNKENSLENEKLKDELLKFCFKSLKCPLLTAQFFEQSEEGGNDPFRYF 240
           IEFTKPFVEEVIDNKENSLENEKLKDELLKFCFKSLKCPLLTAQFFEQSEEGGNDPFRYF
Sbjct: 181 IEFTKPFVEEVIDNKENSLENEKLKDELLKFCFKSLKCPLLTAQFFEQSEEGGNDPFRYF 240

Query: 241 ASEIIGFLSAIGHPFPKMIFNHGRKKRTWNYLEFEEEENKQLADSMASLAYLVFVQGIHI 300
           ASEIIGFLSAIGHPFPKMIFNHGRKKRTWNYLEFEEEENKQLADSMASLAYLVFVQGIHI
Sbjct: 241 ASEIIGFLSAIGHPFPKMIFNHGRKKRTWNYLEFEEEENKQLADSMASLAYLVFVQGIHI 300

Query: 301 DQLPMVLSPLYLLQFNMGHIEVFLQRTEESVISKGLELLENSLLRIEDNSLLYQYLEIKS 360
           DQLPMVLSPLYLLQFNMGHIEVFLQRTEESVISKGLELLENSLLRIEDNSLLYQYLEIKS
Sbjct: 301 DQLPMVLSPLYLLQFNMGHIEVFLQRTEESVISKGLELLENSLLRIEDNSLLYQYLEIKS 360

Query: 361 FLTVPQGLVKVMTLCPIETLRKKSLAMLQLYINKLDSQGKYTLFRCLLNTSNHSGVEAFI 420
           FLTVPQGLVKVMTLCPIETLRKKSLAMLQLYINKLDSQGKYTLFRCLLNTSNHSGVEAFI
Sbjct: 361 FLTVPQGLVKVMTLCPIETLRKKSLAMLQLYINKLDSQGKYTLFRCLLNTSNHSGVEAFI 420

Query: 421 IQNIKNQIDMSLKRTRNNKWFTGPQLISLLDLVLFLPEGAETDLLQNSDRIMASLNLLRY 480
           IQNIKNQIDMSLKRTRNNKWFTGPQLISLLDLVLFLPEGAETDLLQNSDRIMASLNLLRY
Sbjct: 421 IQNIKNQIDMSLKRTRNNKWFTGPQLISLLDLVLFLPEGAETDLLQNSDRIMASLNLLRY 480

Query: 481 LVIKDNENDNQTGLWTELGNIENNFLKPLHIGLNMSKAHYEAEIKNSQEAQKSKDLCSIT 540
           LVIKDNENDNQTGLWTELGNIENNFLKPLHIGLNMSKAHYEAEIKNSQEAQKSKDLCSIT
Sbjct: 481 LVIKDNENDNQTGLWTELGNIENNFLKPLHIGLNMSKAHYEAEIKNSQEAQKSKDLCSIT 540

Query: 541 VSGEEIPNMPPEMQLKVLHSALFTFDLIESVLARVEELIEIKTKSTSEENIGIK 594
           VSGEEIPNMPPEMQLKVLHSALFTFDLIESVLARVEELIEIKTKSTSEENIGIK
Sbjct: 541 VSGEEIPNMPPEMQLKVLHSALFTFDLIESVLARVEELIEIKTKSTSEENIGIK 594


>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
          Length = 1101

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 3/95 (3%)

Query: 272 LEFEEEENKQLADSMASLAYLVFV---QGIHIDQLPMVLSPLYLLQFNMGHIEVFLQRTE 328
           L+  EEENK LAD MASL          G+   ++  +      L +  G +++ +++ E
Sbjct: 513 LQTLEEENKHLADQMASLELQQVTSDYHGLAQQKVEKITESKNKLAYENGKLQIKVKQLE 572

Query: 329 ESVISKGLELLENSLLRIEDNSLLYQYLEIKSFLT 363
           E V S     L+N  LR  +  L  +Y +  S L+
Sbjct: 573 EQVQSFTDTSLQNDHLRKMNKYLQTKYAQANSELS 607


>gi|21914927 helicase, lymphoid-specific [Homo sapiens]
          Length = 838

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 6/69 (8%)

Query: 469 DRIMASLNLLRYLVIKDNENDNQTGLWTELGNIENNFLKPLHIGLNMSKAHYEAEIKNSQ 528
           +R  A   L + ++ K++    Q+GL     N+  NFL P  +   +    YE EIK S+
Sbjct: 734 ERAAAKRKLEKLIIHKNHFKGGQSGL-----NLSKNFLDPKELMELLKSRDYEREIKGSR 788

Query: 529 EAQKS-KDL 536
           E   S KDL
Sbjct: 789 EKVISDKDL 797


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 12/124 (9%)

Query: 483 IKDNENDNQTGLWTELGNIENNFL-----KPLHIGLNMSKAHYEAEIKNSQEAQKSKDLC 537
           IKD     +T L T+L + +N        K + I     + H   E+K  + AQ    + 
Sbjct: 333 IKDLHMAEKTKLITQLRDAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEIAQLRSRIK 392

Query: 538 SITVSGEEIPNMPPEMQL-------KVLHSALFTFDLIESVLARVEELIEIKTKSTSEEN 590
            +T  GEE+     + +        K L +A  T +    + A ++E I+   K++ EE 
Sbjct: 393 QMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKLKAEMDEQIKTIEKTSEEER 452

Query: 591 IGIK 594
           I ++
Sbjct: 453 ISLQ 456


>gi|222352143 TBC1 domain family, member 2 [Homo sapiens]
          Length = 917

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 5/124 (4%)

Query: 270 NYLEFEEEENKQLADSMAS-LAYLVFVQGIHIDQLPMVLSPLYLLQFNMGHIEVFLQRTE 328
           N L   + + + L D ++  L  L+   G H   L +V    +L+ F    I   L R  
Sbjct: 751 NTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNILLRVW 810

Query: 329 ESVISKGLELLENSLLRIEDNSLLYQYLEIKSFLTVPQGLVKVMTLC--PIETLRKKSLA 386
           ++ + +G +  E  +LR+++   +YQYL  + F        K+M +    +   R K L 
Sbjct: 811 DAFLYEGTKYNEKEILRLQNGLEIYQYL--RFFTKTISNSRKLMNIAFNDMNPFRMKQLR 868

Query: 387 MLQL 390
            L++
Sbjct: 869 QLRM 872


>gi|57863263 testis expressed sequence 14 isoform a [Homo sapiens]
          Length = 1491

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 433 KRTRNNKWFTGPQLIS--LLDLVLFLPEGAETDLLQNSDRIMASLNLLRYLVIKDNENDN 490
           K   NN   T   LIS  +LDL +      +T + +N DR+     +L  + +K  E + 
Sbjct: 713 KSNLNNMSTTEEYLISKCVLDLKIM-----QTIMHENDDRLRNIEQILDEVEMKQKEQEE 767

Query: 491 QTGLWTELGNIENNFLKPLHIG 512
           +  LW       N +  PL +G
Sbjct: 768 RMSLWATSREFTNAYKLPLAVG 789


>gi|57863261 testis expressed sequence 14 isoform b [Homo sapiens]
          Length = 1451

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 433 KRTRNNKWFTGPQLIS--LLDLVLFLPEGAETDLLQNSDRIMASLNLLRYLVIKDNENDN 490
           K   NN   T   LIS  +LDL +      +T + +N DR+     +L  + +K  E + 
Sbjct: 713 KSNLNNMSTTEEYLISKCVLDLKIM-----QTIMHENDDRLRNIEQILDEVEMKQKEQEE 767

Query: 491 QTGLWTELGNIENNFLKPLHIG 512
           +  LW       N +  PL +G
Sbjct: 768 RMSLWATSREFTNAYKLPLAVG 789


>gi|70906435 fibrinogen, beta chain preproprotein [Homo sapiens]
          Length = 491

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 14/58 (24%), Positives = 32/58 (55%)

Query: 113 PSGKQISQSILLLLQPLQTVIQKLHNKAYSIGLALSTLWNQLSLLPVPYSKEQIQMDD 170
           P+G Q+ +++L   +P++  + +L+N   ++    S+ +  + LL   + K Q Q+ D
Sbjct: 107 PTGCQLQEALLQQERPIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQVKD 164


>gi|22749191 tetratricopeptide repeat domain 39B [Homo sapiens]
          Length = 616

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 18/59 (30%), Positives = 30/59 (50%)

Query: 330 SVISKGLELLENSLLRIEDNSLLYQYLEIKSFLTVPQGLVKVMTLCPIETLRKKSLAML 388
           S++SK  +L EN L+ +E      Q     SF    + LVK++  C ++ L++   A L
Sbjct: 482 SIVSKRKDLSENLLVTVEKAEAALQSQNFNSFSVDDECLVKLLKGCCLKNLQRPLQAEL 540


>gi|38348382 spermatogenesis associated 21 [Homo sapiens]
          Length = 469

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 498 LGNIENNFLKPLHIGLNMSKAHYEAEIKNSQEAQKS-KDLCSITVSGEEIPNMP 550
           LGN    F+K L     M  +H  A    SQ AQKS + L  +  S   +P  P
Sbjct: 78  LGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTSAPSLPQTP 131


>gi|188595687 gamma filamin isoform b [Homo sapiens]
          Length = 2692

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 37   IEEGHTDQLLEIIQNEKNKVIIKNMGWNLVGPVVRCLLCKDKEDSKRKVYF 87
            + EGHT Q+ E I + +N      +G ++ GP    + C+D ED   KV +
Sbjct: 2018 LSEGHTFQVAEFIVDTRNAGY-GGLGLSIEGPSKVDINCEDMEDGTCKVTY 2067


>gi|116805322 gamma filamin isoform a [Homo sapiens]
          Length = 2725

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 37   IEEGHTDQLLEIIQNEKNKVIIKNMGWNLVGPVVRCLLCKDKEDSKRKVYF 87
            + EGHT Q+ E I + +N      +G ++ GP    + C+D ED   KV +
Sbjct: 2051 LSEGHTFQVAEFIVDTRNAGY-GGLGLSIEGPSKVDINCEDMEDGTCKVTY 2100


>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
           sapiens]
          Length = 1843

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 12/89 (13%)

Query: 272 LEFEEEENKQLADSMASLAYLVFVQGIHIDQLPMVLSPLYLLQFNMGHIEVFLQRTEESV 331
           LE  E+EN QL +    L         +++ L      +  LQ     +E     +E+  
Sbjct: 689 LESLEKENSQLDEENLELRR-------NVESLKCASMKMAQLQLENKELE-----SEKEQ 736

Query: 332 ISKGLELLENSLLRIEDNSLLYQYLEIKS 360
           + KGLELL+ S  + E   + YQ L+I++
Sbjct: 737 LKKGLELLKASFKKTERLEVSYQGLDIEN 765


>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
           sapiens]
          Length = 1870

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 12/89 (13%)

Query: 272 LEFEEEENKQLADSMASLAYLVFVQGIHIDQLPMVLSPLYLLQFNMGHIEVFLQRTEESV 331
           LE  E+EN QL +    L         +++ L      +  LQ     +E     +E+  
Sbjct: 689 LESLEKENSQLDEENLELRR-------NVESLKCASMKMAQLQLENKELE-----SEKEQ 736

Query: 332 ISKGLELLENSLLRIEDNSLLYQYLEIKS 360
           + KGLELL+ S  + E   + YQ L+I++
Sbjct: 737 LKKGLELLKASFKKTERLEVSYQGLDIEN 765


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,238,450
Number of Sequences: 37866
Number of extensions: 921197
Number of successful extensions: 2400
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2393
Number of HSP's gapped (non-prelim): 21
length of query: 594
length of database: 18,247,518
effective HSP length: 108
effective length of query: 486
effective length of database: 14,157,990
effective search space: 6880783140
effective search space used: 6880783140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.