Guide to the Human Genome
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Name: GLMN Sequence: fasta or formatted (594aa) NCBI GI: 16933537
Description:

glomulin

Referenced in:

Peptidylprolyl Isomerases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         20           1
 C cysteine            2.2         13           2
 D aspartate           3.9         23           2
 E glutamate           9.8         58           4
 F phenylalanine       4.7         28           2
 G glycine             4.5         27           2
 H histidine           1.7         10           1
 I isoleucine          7.7         46           2
 K lysine              7.9         47           2
 L leucine            16.0         95           4
 M methionine          2.4         14           1
 N asparagine          6.1         36           2
 P proline             3.5         21           2
 Q glutamine           5.9         35           1
 R arginine            2.7         16           1
 S serine              6.6         39           1
 T threonine           3.5         21           1
 V valine              4.4         26           2
 W tryptophan          0.8          5           1
 Y tyrosine            2.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glomulin 
CCDC150               0.009   coiled-coil domain containing 150 
HELLS                 0.006   helicase, lymphoid-specific 
GOLGA4                0.005   golgi autoantigen, golgin subfamily a, 4 
TBC1D2                0.004   TBC1 domain family, member 2 
TEX14                 0.004   testis expressed sequence 14 isoform a 
TEX14                 0.004   testis expressed sequence 14 isoform b 
FGB                   0.004   fibrinogen, beta chain preproprotein 
TTC39B                0.004   tetratricopeptide repeat domain 39B 
SPATA21               0.004   spermatogenesis associated 21 
FLNC                  0.004   gamma filamin isoform b 
FLNC                  0.004   gamma filamin isoform a 
CCDC88A               0.004   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.004   coiled-coil domain containing 88A isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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