Guide to the Human Genome
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Search of human proteins with 112421122

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|112421122 DnaJ (Hsp40) homolog, subfamily C, member 13 [Homo
sapiens]
         (2243 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|112421122 DnaJ (Hsp40) homolog, subfamily C, member 13 [Homo ...  4481   0.0  
gi|201862587 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...    55   1e-06
gi|201862518 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...    55   1e-06
gi|5031741 DnaJ subfamily A member 2 [Homo sapiens]                    54   2e-06
gi|194328758 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...    51   1e-05
gi|21553335 DnaJ (Hsp40) homolog, subfamily B, member 7 [Homo sa...    50   2e-05
gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...    50   3e-05
gi|4885495 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...    50   3e-05
gi|56549115 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...    49   4e-05
gi|205360840 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...    49   6e-05
gi|205360838 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...    49   6e-05
gi|194328760 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...    49   6e-05
gi|47777312 DnaJ (Hsp40) homolog, subfamily B, member 3 [Homo sa...    48   1e-04
gi|23503241 DnaJ homolog, subfamily B, member 8 [Homo sapiens]         47   3e-04
gi|4504511 DnaJ (Hsp40) homolog, subfamily A, member 1 [Homo sap...    46   4e-04
gi|88501736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...    46   4e-04
gi|27151736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...    46   4e-04
gi|9558755 DnaJ (Hsp40) homolog, subfamily B, member 9 [Homo sap...    45   6e-04
gi|72534740 DnaJ (Hsp40) homolog, subfamily B, member 14 isoform...    45   8e-04
gi|45504382 DnaJ (Hsp40) homolog, subfamily C, member 5 [Homo sa...    44   0.001
gi|56687498 DnaJ (Hsp40) homolog, subfamily C, member 16 [Homo s...    44   0.001
gi|194306642 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo ...    44   0.002
gi|194306640 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo ...    44   0.002
gi|6631085 DnaJ (Hsp40) homolog, subfamily B, member 4 [Homo sap...    43   0.003
gi|29126218 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho...    42   0.005
gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo sap...    42   0.009
gi|7706495 DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...    41   0.015
gi|124028529 symplekin [Homo sapiens]                                  39   0.044
gi|6005872 SEC63-like protein [Homo sapiens]                           39   0.057
gi|24308127 DnaJ (Hsp40) homolog, subfamily C, member 10 [Homo s...    39   0.075

>gi|112421122 DnaJ (Hsp40) homolog, subfamily C, member 13 [Homo
            sapiens]
          Length = 2243

 Score = 4481 bits (11621), Expect = 0.0
 Identities = 2243/2243 (100%), Positives = 2243/2243 (100%)

Query: 1    MNIIRENKDLACFYTTKHSWRGKYKRVFSVGTHAITTYNPNTLEVTNQWPYGDICSISPV 60
            MNIIRENKDLACFYTTKHSWRGKYKRVFSVGTHAITTYNPNTLEVTNQWPYGDICSISPV
Sbjct: 1    MNIIRENKDLACFYTTKHSWRGKYKRVFSVGTHAITTYNPNTLEVTNQWPYGDICSISPV 60

Query: 61   GKGQGTEFNLTFRKGSGKKSETLKFSTEHRTELLTEALRFRTDFSEGKITGRRYNCYKHH 120
            GKGQGTEFNLTFRKGSGKKSETLKFSTEHRTELLTEALRFRTDFSEGKITGRRYNCYKHH
Sbjct: 61   GKGQGTEFNLTFRKGSGKKSETLKFSTEHRTELLTEALRFRTDFSEGKITGRRYNCYKHH 120

Query: 121  WSDSRKPVILEVTPGGFDQINPATNRVLCSYDYRNIEGFVDLSDYQGGFCILYGGFSRLH 180
            WSDSRKPVILEVTPGGFDQINPATNRVLCSYDYRNIEGFVDLSDYQGGFCILYGGFSRLH
Sbjct: 121  WSDSRKPVILEVTPGGFDQINPATNRVLCSYDYRNIEGFVDLSDYQGGFCILYGGFSRLH 180

Query: 181  LFASEQREEIIKSAIDHAGNYIGISLRIRKEPLEFEQYLNLRFGKYSTDESITSLAEFVV 240
            LFASEQREEIIKSAIDHAGNYIGISLRIRKEPLEFEQYLNLRFGKYSTDESITSLAEFVV
Sbjct: 181  LFASEQREEIIKSAIDHAGNYIGISLRIRKEPLEFEQYLNLRFGKYSTDESITSLAEFVV 240

Query: 241  QKISPRHSEPVKRVLALTETCLVERDPATYNIATLKPLGEVFALVCDSENPQLFTIEFIK 300
            QKISPRHSEPVKRVLALTETCLVERDPATYNIATLKPLGEVFALVCDSENPQLFTIEFIK
Sbjct: 241  QKISPRHSEPVKRVLALTETCLVERDPATYNIATLKPLGEVFALVCDSENPQLFTIEFIK 300

Query: 301  GQVRKYSSTERDSLLASLLDGVRASGNRDVCVKMTPTHKGQRWGLLSMPVDEEVESLHLR 360
            GQVRKYSSTERDSLLASLLDGVRASGNRDVCVKMTPTHKGQRWGLLSMPVDEEVESLHLR
Sbjct: 301  GQVRKYSSTERDSLLASLLDGVRASGNRDVCVKMTPTHKGQRWGLLSMPVDEEVESLHLR 360

Query: 361  FLATPPNGNFADAVFRFNANISYSGVLHAVTQDGLFSENKEKLINNAITALLSQEGDVVA 420
            FLATPPNGNFADAVFRFNANISYSGVLHAVTQDGLFSENKEKLINNAITALLSQEGDVVA
Sbjct: 361  FLATPPNGNFADAVFRFNANISYSGVLHAVTQDGLFSENKEKLINNAITALLSQEGDVVA 420

Query: 421  SNAELESQFQAVRRLVASKAGFLAFTQLPKFRERLGVKVVKALKRSNNGIIHAAVDMLCA 480
            SNAELESQFQAVRRLVASKAGFLAFTQLPKFRERLGVKVVKALKRSNNGIIHAAVDMLCA
Sbjct: 421  SNAELESQFQAVRRLVASKAGFLAFTQLPKFRERLGVKVVKALKRSNNGIIHAAVDMLCA 480

Query: 481  LMCPMHDDYDLRQEQLNKASLLSSKKFLENLLEKFNSHVDHGTGALVISSLLDFLTFALC 540
            LMCPMHDDYDLRQEQLNKASLLSSKKFLENLLEKFNSHVDHGTGALVISSLLDFLTFALC
Sbjct: 481  LMCPMHDDYDLRQEQLNKASLLSSKKFLENLLEKFNSHVDHGTGALVISSLLDFLTFALC 540

Query: 541  APYSETTEGQQFDMLLEMVASNGRTLFKLFQHPSMAIIKGAGLVMKAIIEEGDKEIATKM 600
            APYSETTEGQQFDMLLEMVASNGRTLFKLFQHPSMAIIKGAGLVMKAIIEEGDKEIATKM
Sbjct: 541  APYSETTEGQQFDMLLEMVASNGRTLFKLFQHPSMAIIKGAGLVMKAIIEEGDKEIATKM 600

Query: 601  QELALSEGALPRHLHTAMFTISSDQRMLTNRQLSRHLVGLWTADNATATNLLKRILPPGL 660
            QELALSEGALPRHLHTAMFTISSDQRMLTNRQLSRHLVGLWTADNATATNLLKRILPPGL
Sbjct: 601  QELALSEGALPRHLHTAMFTISSDQRMLTNRQLSRHLVGLWTADNATATNLLKRILPPGL 660

Query: 661  LAYLESSDLVPEKDADRMHVRDNVKIAMDQYGKFNKVPEWQRLAGKAAKEVEKFAKEKVD 720
            LAYLESSDLVPEKDADRMHVRDNVKIAMDQYGKFNKVPEWQRLAGKAAKEVEKFAKEKVD
Sbjct: 661  LAYLESSDLVPEKDADRMHVRDNVKIAMDQYGKFNKVPEWQRLAGKAAKEVEKFAKEKVD 720

Query: 721  LVLMHWRDRMGIAQKENINQKPVVLRKRRQRIKIEANWDLFYYRFGQDHARSNLIWNFKT 780
            LVLMHWRDRMGIAQKENINQKPVVLRKRRQRIKIEANWDLFYYRFGQDHARSNLIWNFKT
Sbjct: 721  LVLMHWRDRMGIAQKENINQKPVVLRKRRQRIKIEANWDLFYYRFGQDHARSNLIWNFKT 780

Query: 781  REELKDTLESEMRAFNIDRELGSANVISWNHHEFEVKYECLAEEIKIGDYYLRLLLEEDE 840
            REELKDTLESEMRAFNIDRELGSANVISWNHHEFEVKYECLAEEIKIGDYYLRLLLEEDE
Sbjct: 781  REELKDTLESEMRAFNIDRELGSANVISWNHHEFEVKYECLAEEIKIGDYYLRLLLEEDE 840

Query: 841  NEESGSIKRSYEFFNELYHRFLLTPKVNMKCLCLQALAIVYGRCHEEIGPFTDTRYIIGM 900
            NEESGSIKRSYEFFNELYHRFLLTPKVNMKCLCLQALAIVYGRCHEEIGPFTDTRYIIGM
Sbjct: 841  NEESGSIKRSYEFFNELYHRFLLTPKVNMKCLCLQALAIVYGRCHEEIGPFTDTRYIIGM 900

Query: 901  LERCTDKLERDRLILFLNKLILNKKNVKDLMDSNGIRILVDLLTLAHLHVSRATVPLQSN 960
            LERCTDKLERDRLILFLNKLILNKKNVKDLMDSNGIRILVDLLTLAHLHVSRATVPLQSN
Sbjct: 901  LERCTDKLERDRLILFLNKLILNKKNVKDLMDSNGIRILVDLLTLAHLHVSRATVPLQSN 960

Query: 961  VIEAAPDMKRESEKEWYFGNADKERSGPYGFHEMQELWTKGMLNAKTRCWAQGMDGWRPL 1020
            VIEAAPDMKRESEKEWYFGNADKERSGPYGFHEMQELWTKGMLNAKTRCWAQGMDGWRPL
Sbjct: 961  VIEAAPDMKRESEKEWYFGNADKERSGPYGFHEMQELWTKGMLNAKTRCWAQGMDGWRPL 1020

Query: 1021 QSIPQLKWCLLASGQAVLNETDLATLILNMLITMCGYFPSRDQDNAIIRPLPKVKRLLSD 1080
            QSIPQLKWCLLASGQAVLNETDLATLILNMLITMCGYFPSRDQDNAIIRPLPKVKRLLSD
Sbjct: 1021 QSIPQLKWCLLASGQAVLNETDLATLILNMLITMCGYFPSRDQDNAIIRPLPKVKRLLSD 1080

Query: 1081 STCLPHIIQLLLTFDPILVEKVAILLYHIMQDNPQLPRLYLSGVFFFIMMYTGSNVLPVA 1140
            STCLPHIIQLLLTFDPILVEKVAILLYHIMQDNPQLPRLYLSGVFFFIMMYTGSNVLPVA
Sbjct: 1081 STCLPHIIQLLLTFDPILVEKVAILLYHIMQDNPQLPRLYLSGVFFFIMMYTGSNVLPVA 1140

Query: 1141 RFLKYTHTKQAFKSEETKGQDIFQRSILGHILPEAMVCYLENYEPEKFSEIFLGEFDTPE 1200
            RFLKYTHTKQAFKSEETKGQDIFQRSILGHILPEAMVCYLENYEPEKFSEIFLGEFDTPE
Sbjct: 1141 RFLKYTHTKQAFKSEETKGQDIFQRSILGHILPEAMVCYLENYEPEKFSEIFLGEFDTPE 1200

Query: 1201 AIWSSEMRRLMIEKIAAHLADFTPRLQSNTRALYQYCPIPIINYPQLENELFCNIYYLKQ 1260
            AIWSSEMRRLMIEKIAAHLADFTPRLQSNTRALYQYCPIPIINYPQLENELFCNIYYLKQ
Sbjct: 1201 AIWSSEMRRLMIEKIAAHLADFTPRLQSNTRALYQYCPIPIINYPQLENELFCNIYYLKQ 1260

Query: 1261 LCDTLRFPDWPIKDPVKLLKDTLDAWKKEVEKKPPMMSIDDAYEVLNLPQGQGPHDESKI 1320
            LCDTLRFPDWPIKDPVKLLKDTLDAWKKEVEKKPPMMSIDDAYEVLNLPQGQGPHDESKI
Sbjct: 1261 LCDTLRFPDWPIKDPVKLLKDTLDAWKKEVEKKPPMMSIDDAYEVLNLPQGQGPHDESKI 1320

Query: 1321 RKAYFRLAQKYHPDKNPEGRDMFEKVNKAYEFLCTKSAKIVDGPDPENIILILKTQSILF 1380
            RKAYFRLAQKYHPDKNPEGRDMFEKVNKAYEFLCTKSAKIVDGPDPENIILILKTQSILF
Sbjct: 1321 RKAYFRLAQKYHPDKNPEGRDMFEKVNKAYEFLCTKSAKIVDGPDPENIILILKTQSILF 1380

Query: 1381 NRHKEDLQPYKYAGYPMLIRTITMETSDDLLFSKESPLLPAATELAFHTVNCSALNAEEL 1440
            NRHKEDLQPYKYAGYPMLIRTITMETSDDLLFSKESPLLPAATELAFHTVNCSALNAEEL
Sbjct: 1381 NRHKEDLQPYKYAGYPMLIRTITMETSDDLLFSKESPLLPAATELAFHTVNCSALNAEEL 1440

Query: 1441 RRENGLEVLQEAFSRCVAVLTRASKPSDMSVQVCGYISKCYSVAAQFEECREKITEMPSI 1500
            RRENGLEVLQEAFSRCVAVLTRASKPSDMSVQVCGYISKCYSVAAQFEECREKITEMPSI
Sbjct: 1441 RRENGLEVLQEAFSRCVAVLTRASKPSDMSVQVCGYISKCYSVAAQFEECREKITEMPSI 1500

Query: 1501 IKDLCRVLYFGKSIPRVAALGVECVSSFAVDFWLQTHLFQAGILWYLLGFLFNYDYTLEE 1560
            IKDLCRVLYFGKSIPRVAALGVECVSSFAVDFWLQTHLFQAGILWYLLGFLFNYDYTLEE
Sbjct: 1501 IKDLCRVLYFGKSIPRVAALGVECVSSFAVDFWLQTHLFQAGILWYLLGFLFNYDYTLEE 1560

Query: 1561 SGIQKSEETNQQEVANSLAKLSVHALSRLGGYLAEEQATPENPTIRKSLAGMLTPYVARK 1620
            SGIQKSEETNQQEVANSLAKLSVHALSRLGGYLAEEQATPENPTIRKSLAGMLTPYVARK
Sbjct: 1561 SGIQKSEETNQQEVANSLAKLSVHALSRLGGYLAEEQATPENPTIRKSLAGMLTPYVARK 1620

Query: 1621 LAVASVTEILKMLNSNTESPYLIWNNSTRAELLEFLESQQENMIKKGDCDKTYGSEFVYS 1680
            LAVASVTEILKMLNSNTESPYLIWNNSTRAELLEFLESQQENMIKKGDCDKTYGSEFVYS
Sbjct: 1621 LAVASVTEILKMLNSNTESPYLIWNNSTRAELLEFLESQQENMIKKGDCDKTYGSEFVYS 1680

Query: 1681 DHAKELIVGEIFVRVYNEVPTFQLEVPKAFAASLLDYIGSQAQYLHTFMAITHAAKVESE 1740
            DHAKELIVGEIFVRVYNEVPTFQLEVPKAFAASLLDYIGSQAQYLHTFMAITHAAKVESE
Sbjct: 1681 DHAKELIVGEIFVRVYNEVPTFQLEVPKAFAASLLDYIGSQAQYLHTFMAITHAAKVESE 1740

Query: 1741 QHGDRLPRVEMALEALRNVIKYNPGSESECIGHFKLIFSLLRVHGAGQVQQLALEVVNIV 1800
            QHGDRLPRVEMALEALRNVIKYNPGSESECIGHFKLIFSLLRVHGAGQVQQLALEVVNIV
Sbjct: 1741 QHGDRLPRVEMALEALRNVIKYNPGSESECIGHFKLIFSLLRVHGAGQVQQLALEVVNIV 1800

Query: 1801 TSNQDCVNNIAESMVLSSLLALLHSLPSSRQLVLETLYALTSSTKIIKEAMAKGALIYLL 1860
            TSNQDCVNNIAESMVLSSLLALLHSLPSSRQLVLETLYALTSSTKIIKEAMAKGALIYLL
Sbjct: 1801 TSNQDCVNNIAESMVLSSLLALLHSLPSSRQLVLETLYALTSSTKIIKEAMAKGALIYLL 1860

Query: 1861 DMFCNSTHPQVRAQTAELFAKMTADKLIGPKVRITLMKFLPSVFMDAMRDNPEAAVHIFE 1920
            DMFCNSTHPQVRAQTAELFAKMTADKLIGPKVRITLMKFLPSVFMDAMRDNPEAAVHIFE
Sbjct: 1861 DMFCNSTHPQVRAQTAELFAKMTADKLIGPKVRITLMKFLPSVFMDAMRDNPEAAVHIFE 1920

Query: 1921 GTHENPELIWNDNSRDKVSTTVREMMLEHFKNQQDNPEANWKLPEDFAVVFGEAEGELAV 1980
            GTHENPELIWNDNSRDKVSTTVREMMLEHFKNQQDNPEANWKLPEDFAVVFGEAEGELAV
Sbjct: 1921 GTHENPELIWNDNSRDKVSTTVREMMLEHFKNQQDNPEANWKLPEDFAVVFGEAEGELAV 1980

Query: 1981 GGVFLRIFIAQPAWVLRKPREFLIALLEKLTELLEKNNPHGETLETLTMATVCLFSAQPQ 2040
            GGVFLRIFIAQPAWVLRKPREFLIALLEKLTELLEKNNPHGETLETLTMATVCLFSAQPQ
Sbjct: 1981 GGVFLRIFIAQPAWVLRKPREFLIALLEKLTELLEKNNPHGETLETLTMATVCLFSAQPQ 2040

Query: 2041 LADQVPPLGHLPKVIQAMNHRNNAIPKSAIRVIHALSENELCVRAMASLETIGPLMNGMK 2100
            LADQVPPLGHLPKVIQAMNHRNNAIPKSAIRVIHALSENELCVRAMASLETIGPLMNGMK
Sbjct: 2041 LADQVPPLGHLPKVIQAMNHRNNAIPKSAIRVIHALSENELCVRAMASLETIGPLMNGMK 2100

Query: 2101 KRADTVGLACEAINRMFQKEQSELVAQALKADLVPYLLKLLEGIGLENLDSPAATKAQIV 2160
            KRADTVGLACEAINRMFQKEQSELVAQALKADLVPYLLKLLEGIGLENLDSPAATKAQIV
Sbjct: 2101 KRADTVGLACEAINRMFQKEQSELVAQALKADLVPYLLKLLEGIGLENLDSPAATKAQIV 2160

Query: 2161 KALKAMTRSLQYGEQVNEILCRSSVWSAFKDQKHDLFISESQTAGYLTGPGVAGYLTAGT 2220
            KALKAMTRSLQYGEQVNEILCRSSVWSAFKDQKHDLFISESQTAGYLTGPGVAGYLTAGT
Sbjct: 2161 KALKAMTRSLQYGEQVNEILCRSSVWSAFKDQKHDLFISESQTAGYLTGPGVAGYLTAGT 2220

Query: 2221 STSVMSNLPPPVDHEAGDLGYQT 2243
            STSVMSNLPPPVDHEAGDLGYQT
Sbjct: 2221 STSVMSNLPPPVDHEAGDLGYQT 2243


>gi|201862587 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 1
            [Homo sapiens]
          Length = 420

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 9/86 (10%)

Query: 1274 DPVKLLKDTLDAW----KKEVEKKPPMMSIDDAYEVLNLPQGQGPHDESKIRKAYFRLAQ 1329
            +P+KL   TL+ +     KE    P  +   D Y++L +P G    +E +I+KAY ++A 
Sbjct: 45   EPLKLRAWTLNGFVKFRNKETSAGPVAVMGKDYYKILGIPSGA---NEDEIKKAYRKMAL 101

Query: 1330 KYHPDKN--PEGRDMFEKVNKAYEFL 1353
            KYHPDKN  P   + F+++ +AY+ L
Sbjct: 102  KYHPDKNKEPNAEEKFKEIAEAYDVL 127


>gi|201862518 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 2
            [Homo sapiens]
          Length = 382

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 9/86 (10%)

Query: 1274 DPVKLLKDTLDAW----KKEVEKKPPMMSIDDAYEVLNLPQGQGPHDESKIRKAYFRLAQ 1329
            +P+KL   TL+ +     KE    P  +   D Y++L +P G    +E +I+KAY ++A 
Sbjct: 7    EPLKLRAWTLNGFVKFRNKETSAGPVAVMGKDYYKILGIPSGA---NEDEIKKAYRKMAL 63

Query: 1330 KYHPDKN--PEGRDMFEKVNKAYEFL 1353
            KYHPDKN  P   + F+++ +AY+ L
Sbjct: 64   KYHPDKNKEPNAEEKFKEIAEAYDVL 89


>gi|5031741 DnaJ subfamily A member 2 [Homo sapiens]
          Length = 412

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 23/51 (45%), Positives = 37/51 (72%), Gaps = 3/51 (5%)

Query: 1303 YEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKNPEGRDMFEKVNKAYEFL 1353
            Y++L +P G     E++++KAY +LA++YHPDKNP   D F++++ AYE L
Sbjct: 10   YDILGVPPGAS---ENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVL 57


>gi|194328758 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform 1
            [Homo sapiens]
          Length = 426

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 5/69 (7%)

Query: 1287 KKEVEKKP--PMMSIDDAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKNPEGRDMFE 1344
            K++  +KP   M+     Y++L +     P +   I+KAY +LA KYHPDKNP+  + F+
Sbjct: 19   KEQTPEKPRHKMVKETQYYDILGVKPSASPEE---IKKAYRKLALKYHPDKNPDEGEKFK 75

Query: 1345 KVNKAYEFL 1353
             +++AYE L
Sbjct: 76   LISQAYEVL 84


>gi|21553335 DnaJ (Hsp40) homolog, subfamily B, member 7 [Homo
            sapiens]
          Length = 309

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 7/57 (12%)

Query: 1301 DAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKNPEGRD----MFEKVNKAYEFL 1353
            D YEVL L +   P D   I+KAY ++A K+HPDKNPE ++     F++V +AYE L
Sbjct: 3    DYYEVLGLQRYASPED---IKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVL 56


>gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform a
            [Homo sapiens]
          Length = 326

 Score = 49.7 bits (117), Expect = 3e-05
 Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 7/57 (12%)

Query: 1301 DAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKNPEGRD----MFEKVNKAYEFL 1353
            D YEVL + +   P D   I+KAY +LA K+HPDKNPE ++     F++V +AYE L
Sbjct: 3    DYYEVLGVQRHASPED---IKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVL 56


>gi|4885495 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b
            [Homo sapiens]
          Length = 241

 Score = 49.7 bits (117), Expect = 3e-05
 Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 7/57 (12%)

Query: 1301 DAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKNPEGRD----MFEKVNKAYEFL 1353
            D YEVL + +   P D   I+KAY +LA K+HPDKNPE ++     F++V +AYE L
Sbjct: 3    DYYEVLGVQRHASPED---IKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVL 56


>gi|56549115 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 3
            [Homo sapiens]
          Length = 348

 Score = 49.3 bits (116), Expect = 4e-05
 Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 5/55 (9%)

Query: 1301 DAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKN--PEGRDMFEKVNKAYEFL 1353
            D Y++L +P G    +E +I+KAY ++A KYHPDKN  P   + F+++ +AY+ L
Sbjct: 4    DYYKILGIPSGA---NEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVL 55


>gi|205360840 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform 2
            [Homo sapiens]
          Length = 453

 Score = 48.9 bits (115), Expect = 6e-05
 Identities = 22/57 (38%), Positives = 39/57 (68%), Gaps = 6/57 (10%)

Query: 1300 DDAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKN---PEGRDMFEKVNKAYEFL 1353
            +D Y++L +P+      + +I+KAY++LA+KYHPD N   P+ ++ F ++ +AYE L
Sbjct: 92   EDYYQILGVPRNAS---QKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVL 145


>gi|205360838 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform 1
            [Homo sapiens]
          Length = 480

 Score = 48.9 bits (115), Expect = 6e-05
 Identities = 22/57 (38%), Positives = 39/57 (68%), Gaps = 6/57 (10%)

Query: 1300 DDAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKN---PEGRDMFEKVNKAYEFL 1353
            +D Y++L +P+      + +I+KAY++LA+KYHPD N   P+ ++ F ++ +AYE L
Sbjct: 92   EDYYQILGVPRNAS---QKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVL 145


>gi|194328760 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform 2
            [Homo sapiens]
          Length = 397

 Score = 48.9 bits (115), Expect = 6e-05
 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 1303 YEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKNPEGRDMFEKVNKAYEFL 1353
            Y++L +     P +   I+KAY +LA KYHPDKNP+  + F+ +++AYE L
Sbjct: 8    YDILGVKPSASPEE---IKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVL 55


>gi|47777312 DnaJ (Hsp40) homolog, subfamily B, member 3 [Homo
            sapiens]
          Length = 145

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 7/57 (12%)

Query: 1301 DAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKNPEGRD----MFEKVNKAYEFL 1353
            D YEVL++P+         I+KAY +LA K+HPDKNPE ++     F++V +AYE L
Sbjct: 3    DYYEVLDVPRQAS---SEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVL 56


>gi|23503241 DnaJ homolog, subfamily B, member 8 [Homo sapiens]
          Length = 232

 Score = 46.6 bits (109), Expect = 3e-04
 Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 7/55 (12%)

Query: 1303 YEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKNPEGRDMFEK----VNKAYEFL 1353
            YEVL +     P D   I+KAY +LA ++HPDKNP+ ++  EK    V++AYE L
Sbjct: 5    YEVLGVQASASPED---IKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVL 56


>gi|4504511 DnaJ (Hsp40) homolog, subfamily A, member 1 [Homo sapiens]
          Length = 397

 Score = 46.2 bits (108), Expect = 4e-04
 Identities = 18/37 (48%), Positives = 29/37 (78%)

Query: 1317 ESKIRKAYFRLAQKYHPDKNPEGRDMFEKVNKAYEFL 1353
            + +++KAY +LA KYHPDKNP   + F+++++AYE L
Sbjct: 19   QEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVL 55


>gi|88501736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform a
            [Homo sapiens]
          Length = 277

 Score = 46.2 bits (108), Expect = 4e-04
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 7/58 (12%)

Query: 1303 YEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKNPEGRDM----FEKVNKAYEFLCTK 1356
            YE+L++P+     D   I+KAY R A ++HPDKNP+ ++     F++V +AYE L  K
Sbjct: 5    YEILDVPRSASADD---IKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDK 59


>gi|27151736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform b
            [Homo sapiens]
          Length = 324

 Score = 46.2 bits (108), Expect = 4e-04
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 7/58 (12%)

Query: 1303 YEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKNPEGRDM----FEKVNKAYEFLCTK 1356
            YE+L++P+     D   I+KAY R A ++HPDKNP+ ++     F++V +AYE L  K
Sbjct: 5    YEILDVPRSASADD---IKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDK 59


>gi|9558755 DnaJ (Hsp40) homolog, subfamily B, member 9 [Homo sapiens]
          Length = 223

 Score = 45.4 bits (106), Expect = 6e-04
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 5/53 (9%)

Query: 1303 YEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKN--PEGRDMFEKVNKAYEFL 1353
            Y++L +P+      E +I+KA+ +LA KYHPDKN  P+    F ++ +AYE L
Sbjct: 28   YDILGVPKSAS---ERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETL 77


>gi|72534740 DnaJ (Hsp40) homolog, subfamily B, member 14 isoform 1
            [Homo sapiens]
          Length = 379

 Score = 45.1 bits (105), Expect = 8e-04
 Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 5/53 (9%)

Query: 1303 YEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKN--PEGRDMFEKVNKAYEFL 1353
            YEVL + +  G  D   ++KAY +LA K+HPDKN  P   D F+K+  AY  L
Sbjct: 110  YEVLGVTKDAGDED---LKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVL 159


>gi|45504382 DnaJ (Hsp40) homolog, subfamily C, member 5 [Homo
            sapiens]
          Length = 198

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 6/57 (10%)

Query: 1300 DDAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDK---NPEGRDMFEKVNKAYEFL 1353
            +  Y VL L +     D   I+K+Y +LA KYHPDK   NPE  D F+++N A+  L
Sbjct: 14   ESLYHVLGLDKNATSDD---IKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAIL 67


>gi|56687498 DnaJ (Hsp40) homolog, subfamily C, member 16 [Homo
            sapiens]
          Length = 782

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 5/61 (8%)

Query: 1301 DAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKN--PEGRDMFEKVNKAYEFLCTKSA 1358
            D Y VL + +     D   I+KAY +LA+++HPDKN  P   D F +++KAYE L  +  
Sbjct: 29   DPYRVLGVSRTASQAD---IKKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEK 85

Query: 1359 K 1359
            +
Sbjct: 86   R 86


>gi|194306642 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo
            sapiens]
          Length = 409

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 5/55 (9%)

Query: 1301 DAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKN--PEGRDMFEKVNKAYEFL 1353
            D YE+L + +G    D   ++KAY RLA K+HPDKN  P   + F+ +  AY  L
Sbjct: 144  DYYEILGVSRGASDED---LKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVL 195


>gi|194306640 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo
            sapiens]
          Length = 409

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 5/55 (9%)

Query: 1301 DAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKN--PEGRDMFEKVNKAYEFL 1353
            D YE+L + +G    D   ++KAY RLA K+HPDKN  P   + F+ +  AY  L
Sbjct: 144  DYYEILGVSRGASDED---LKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVL 195


>gi|6631085 DnaJ (Hsp40) homolog, subfamily B, member 4 [Homo sapiens]
          Length = 337

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 5/55 (9%)

Query: 1301 DAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKN--PEGRDMFEKVNKAYEFL 1353
            D Y +L + +G    D   I+KAY + A K+HPDKN  P+  + F++V +AYE L
Sbjct: 4    DYYCILGIEKGASDED---IKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVL 55


>gi|29126218 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Homo
            sapiens]
          Length = 199

 Score = 42.4 bits (98), Expect = 0.005
 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 6/62 (9%)

Query: 1303 YEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKNPE---GRDMFEKVNKAYEFLCTKSAK 1359
            YE+L L +G       +I+K Y +LA K+HPDKNP+     + F+++N A+  L   S +
Sbjct: 21   YEILGLHKGAS---NEEIKKTYRKLALKHHPDKNPDDPAATEKFKEINNAHAILTDISKR 77

Query: 1360 IV 1361
             +
Sbjct: 78   SI 79


>gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo sapiens]
          Length = 340

 Score = 41.6 bits (96), Expect = 0.009
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 5/55 (9%)

Query: 1301 DAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKN--PEGRDMFEKVNKAYEFL 1353
            D Y+ L L +G     + +I++AY R A +YHPDKN  P   + F+++ +AY+ L
Sbjct: 4    DYYQTLGLARGAS---DEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVL 55


>gi|7706495 DnaJ (Hsp40) homolog, subfamily B, member 11 precursor
            [Homo sapiens]
          Length = 358

 Score = 40.8 bits (94), Expect = 0.015
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 6/56 (10%)

Query: 1301 DAYEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKN---PEGRDMFEKVNKAYEFL 1353
            D Y++L +P+     D   I+KAY +LA + HPD+N   P+ ++ F+ +  AYE L
Sbjct: 25   DFYKILGVPRSASIKD---IKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVL 77


>gi|124028529 symplekin [Homo sapiens]
          Length = 1274

 Score = 39.3 bits (90), Expect = 0.044
 Identities = 89/374 (23%), Positives = 145/374 (38%), Gaps = 82/374 (21%)

Query: 1789 VQQLALEVVNIVTSNQDCVNNIAESMVLSSLLALLHSLPSSRQLVLETLYALTSSTKIIK 1848
            + + ALEVV      + C +     + +S+L  L+   PS +   L  L  L+S  K   
Sbjct: 674  ITESALEVVR-----KYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDLSSHEK--- 725

Query: 1849 EAMAKGALIYLLDMFCNSTHPQVRAQTAELFAKMTADKLIGPKVRITLMKFLPSVFMDAM 1908
            + +   AL+++  M+      Q+R +  E FA      L+ P          PSV   A 
Sbjct: 726  DKVRSQALLFIKRMY---EKEQLR-EYVEKFALNYLQLLVHPNP--------PSVLFGAD 773

Query: 1909 RDNPEAAVHIFEGTHENPELIWNDNSRDKVSTTVREMMLEHFKNQQDNPEANWKLPEDFA 1968
            +D   AA              W +        TV++ +  +      N     KL  + A
Sbjct: 774  KDTEVAAP-------------WTEE-------TVKQCLYLYLALLPQNH----KLIHELA 809

Query: 1969 VVFGEAEGELAVGGVFLRIFIAQPAWVLRKPREFLIALLEKLTELLEKNNPHGETLETLT 2028
             V+ EA  ++      LR+ I QP   +      L+ L+E        N P G      T
Sbjct: 810  AVYTEAIADIK--RTVLRV-IEQPIRGMGMNSPELLLLVE--------NCPKGAE----T 854

Query: 2029 MATVCLFSAQPQLADQVPPLGHLPKVIQAMNHRNNAIPKSAIRVIHALSENELCVRAMAS 2088
            + T CL S    L D+VPP   L K ++ + H+     +  I V++ L + E+ ++A+  
Sbjct: 855  LVTRCLHS----LTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEKKEV-IQALPK 909

Query: 2089 LETIGPLMNGMKKRADTVGLACEAINRMFQKEQSELVAQALKADLVPYLLKLLEGIGLEN 2148
            L  + P+            +  E  NR+   +  E    +  + L P  L     I L N
Sbjct: 910  LIKLNPI------------VVKEVFNRLLGTQHGE--GNSALSPLNPGELL----IALHN 951

Query: 2149 LDSPAATKAQIVKA 2162
            +DS       I+KA
Sbjct: 952  IDSVKCDMKSIIKA 965


>gi|6005872 SEC63-like protein [Homo sapiens]
          Length = 760

 Score = 38.9 bits (89), Expect = 0.057
 Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 31/131 (23%)

Query: 1303 YEVLNLPQGQGPHDESKIRKAYFRLAQKYHPDKNPEGRDMFEKVNKAYEFLCTKSAK--- 1359
            YEVLNL  G      ++I+K Y  L+ KYHPDK  +   MF ++ KAY  L  + ++   
Sbjct: 106  YEVLNLDPGA---TVAEIKKQYRLLSLKYHPDKGGD-EVMFMRIAKAYAALTDEESRKNW 161

Query: 1360 ----IVDGP--------------DPENIILILKTQSILFNRHKEDL------QPYKYAGY 1395
                  DGP              D +N IL+L    + F      +      +  +Y+G 
Sbjct: 162  EEFGNPDGPQATSFGIALPAWIVDQKNSILVLLVYGLAFMVILPVVVGSWWYRSIRYSGD 221

Query: 1396 PMLIRTITMET 1406
             +LIRT  + T
Sbjct: 222  QILIRTTQIYT 232


>gi|24308127 DnaJ (Hsp40) homolog, subfamily C, member 10 [Homo
            sapiens]
          Length = 793

 Score = 38.5 bits (88), Expect = 0.075
 Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 3/38 (7%)

Query: 1319 KIRKAYFRLAQKYHPDKNPEGRDM---FEKVNKAYEFL 1353
            +IR+A+ +LA K HPDKNP   +    F K+N+AYE L
Sbjct: 50   EIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVL 87


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,993,110
Number of Sequences: 37866
Number of extensions: 3527935
Number of successful extensions: 8274
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 8211
Number of HSP's gapped (non-prelim): 83
length of query: 2243
length of database: 18,247,518
effective HSP length: 118
effective length of query: 2125
effective length of database: 13,779,330
effective search space: 29281076250
effective search space used: 29281076250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 70 (31.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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