Search of human proteins with 111548654

Search of human proteins with 111548654

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|111548654 hypothetical protein LOC51057 isoform 1 [Homo
sapiens]
         (587 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|111548654 hypothetical protein LOC51057 isoform 1 [Homo sapiens]  1176   0.0  
gi|111548652 hypothetical protein LOC51057 isoform 2 [Homo sapiens]  1164   0.0  
gi|75709220 cleavage stimulation factor subunit 1 [Homo sapiens]       34   0.43 
gi|4557491 cleavage stimulation factor subunit 1 [Homo sapiens]        34   0.43 
gi|75709217 cleavage stimulation factor subunit 1 [Homo sapiens]       34   0.43 
gi|206597470 neural precursor cell expressed, developmentally do...    33   0.56 
gi|206597468 neural precursor cell expressed, developmentally do...    33   0.56 
gi|23097254 neural precursor cell expressed, developmentally dow...    33   0.56 
gi|206597465 neural precursor cell expressed, developmentally do...    33   0.56 
gi|74229017 2'-5'-oligoadenylate synthetase 2 isoform 2 [Homo sa...    32   1.6  
gi|74229019 2'-5'-oligoadenylate synthetase 2 isoform 1 [Homo sa...    32   1.6  
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]           31   2.8  
gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens]         31   3.6  
gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens]         31   3.6  
gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens]         31   3.6  
gi|223005862 echinoderm microtubule associated protein like 6 [H...    30   4.7  
gi|50053006 olfactory receptor, family 2, subfamily D, member 2 ...    30   8.1  

>gi|111548654 hypothetical protein LOC51057 isoform 1 [Homo sapiens]
          Length = 587

 Score = 1176 bits (3043), Expect = 0.0
 Identities = 587/587 (100%), Positives = 587/587 (100%)

Query: 1   MFSSLHSALLTDSFIILSFLAQNKLCFIQFTKKMESSDVNKRLEKLSALDYKIFYYEIPG 60
           MFSSLHSALLTDSFIILSFLAQNKLCFIQFTKKMESSDVNKRLEKLSALDYKIFYYEIPG
Sbjct: 1   MFSSLHSALLTDSFIILSFLAQNKLCFIQFTKKMESSDVNKRLEKLSALDYKIFYYEIPG 60

Query: 61  PINKTTERHLAINCVHDRVVCWWPLVNDDAWPWAPISSEKDRANLLLLGYAQGRLEVLSS 120
           PINKTTERHLAINCVHDRVVCWWPLVNDDAWPWAPISSEKDRANLLLLGYAQGRLEVLSS
Sbjct: 61  PINKTTERHLAINCVHDRVVCWWPLVNDDAWPWAPISSEKDRANLLLLGYAQGRLEVLSS 120

Query: 121 VRTEWDPLDVRFGTKQPYQVFTVEHSVSVDKEPMADSCIYECIRNKIQCVSVTRIPLKSK 180
           VRTEWDPLDVRFGTKQPYQVFTVEHSVSVDKEPMADSCIYECIRNKIQCVSVTRIPLKSK
Sbjct: 121 VRTEWDPLDVRFGTKQPYQVFTVEHSVSVDKEPMADSCIYECIRNKIQCVSVTRIPLKSK 180

Query: 181 AISCCRNVTEDKLILGCEDSSLILYETHRRVTLLAQTELLPSLISCHPSGAILLVGSNQG 240
           AISCCRNVTEDKLILGCEDSSLILYETHRRVTLLAQTELLPSLISCHPSGAILLVGSNQG
Sbjct: 181 AISCCRNVTEDKLILGCEDSSLILYETHRRVTLLAQTELLPSLISCHPSGAILLVGSNQG 240

Query: 241 ELQIFDMALSPINIQLLAEDRLPRETLQFSKLFDASSSLVQMQWIAPQVVSQKGEGSDIY 300
           ELQIFDMALSPINIQLLAEDRLPRETLQFSKLFDASSSLVQMQWIAPQVVSQKGEGSDIY
Sbjct: 241 ELQIFDMALSPINIQLLAEDRLPRETLQFSKLFDASSSLVQMQWIAPQVVSQKGEGSDIY 300

Query: 301 DLLFLRFERGPLGVLLFKLGVFTRGQLGLIDIIFQYIHCDEIYEAINILSSMNWDTLGHQ 360
           DLLFLRFERGPLGVLLFKLGVFTRGQLGLIDIIFQYIHCDEIYEAINILSSMNWDTLGHQ
Sbjct: 301 DLLFLRFERGPLGVLLFKLGVFTRGQLGLIDIIFQYIHCDEIYEAINILSSMNWDTLGHQ 360

Query: 361 CFISMSAIVNHLLRQKLTPEREAQLETSLGTFYAPTRPLLDSTILEYRDQISKYARRFFH 420
           CFISMSAIVNHLLRQKLTPEREAQLETSLGTFYAPTRPLLDSTILEYRDQISKYARRFFH
Sbjct: 361 CFISMSAIVNHLLRQKLTPEREAQLETSLGTFYAPTRPLLDSTILEYRDQISKYARRFFH 420

Query: 421 HLLRYQRFEKAFLLAVDVGARDLFMDIHYLALDKGELALAEVARKRASDIDAESITSGVE 480
           HLLRYQRFEKAFLLAVDVGARDLFMDIHYLALDKGELALAEVARKRASDIDAESITSGVE
Sbjct: 421 HLLRYQRFEKAFLLAVDVGARDLFMDIHYLALDKGELALAEVARKRASDIDAESITSGVE 480

Query: 481 LLGPLDRGDMLNEAFIGLSLAPQGEDSFPDNLPPSCPTHRHILQQRILNGSSNRQIIDRR 540
           LLGPLDRGDMLNEAFIGLSLAPQGEDSFPDNLPPSCPTHRHILQQRILNGSSNRQIIDRR
Sbjct: 481 LLGPLDRGDMLNEAFIGLSLAPQGEDSFPDNLPPSCPTHRHILQQRILNGSSNRQIIDRR 540

Query: 541 NELEKDICSGFLMTNTCNAEDGELREDGREQEIRDGGSLKMIHFGLV 587
           NELEKDICSGFLMTNTCNAEDGELREDGREQEIRDGGSLKMIHFGLV
Sbjct: 541 NELEKDICSGFLMTNTCNAEDGELREDGREQEIRDGGSLKMIHFGLV 587


>gi|111548652 hypothetical protein LOC51057 isoform 2 [Homo sapiens]
          Length = 746

 Score = 1164 bits (3010), Expect = 0.0
 Identities = 580/584 (99%), Positives = 582/584 (99%)

Query: 4   SLHSALLTDSFIILSFLAQNKLCFIQFTKKMESSDVNKRLEKLSALDYKIFYYEIPGPIN 63
           ++  ALLTDSFIILSFLAQNKLCFIQFTKKMESSDVNKRLEKLSALDYKIFYYEIPGPIN
Sbjct: 163 TISDALLTDSFIILSFLAQNKLCFIQFTKKMESSDVNKRLEKLSALDYKIFYYEIPGPIN 222

Query: 64  KTTERHLAINCVHDRVVCWWPLVNDDAWPWAPISSEKDRANLLLLGYAQGRLEVLSSVRT 123
           KTTERHLAINCVHDRVVCWWPLVNDDAWPWAPISSEKDRANLLLLGYAQGRLEVLSSVRT
Sbjct: 223 KTTERHLAINCVHDRVVCWWPLVNDDAWPWAPISSEKDRANLLLLGYAQGRLEVLSSVRT 282

Query: 124 EWDPLDVRFGTKQPYQVFTVEHSVSVDKEPMADSCIYECIRNKIQCVSVTRIPLKSKAIS 183
           EWDPLDVRFGTKQPYQVFTVEHSVSVDKEPMADSCIYECIRNKIQCVSVTRIPLKSKAIS
Sbjct: 283 EWDPLDVRFGTKQPYQVFTVEHSVSVDKEPMADSCIYECIRNKIQCVSVTRIPLKSKAIS 342

Query: 184 CCRNVTEDKLILGCEDSSLILYETHRRVTLLAQTELLPSLISCHPSGAILLVGSNQGELQ 243
           CCRNVTEDKLILGCEDSSLILYETHRRVTLLAQTELLPSLISCHPSGAILLVGSNQGELQ
Sbjct: 343 CCRNVTEDKLILGCEDSSLILYETHRRVTLLAQTELLPSLISCHPSGAILLVGSNQGELQ 402

Query: 244 IFDMALSPINIQLLAEDRLPRETLQFSKLFDASSSLVQMQWIAPQVVSQKGEGSDIYDLL 303
           IFDMALSPINIQLLAEDRLPRETLQFSKLFDASSSLVQMQWIAPQVVSQKGEGSDIYDLL
Sbjct: 403 IFDMALSPINIQLLAEDRLPRETLQFSKLFDASSSLVQMQWIAPQVVSQKGEGSDIYDLL 462

Query: 304 FLRFERGPLGVLLFKLGVFTRGQLGLIDIIFQYIHCDEIYEAINILSSMNWDTLGHQCFI 363
           FLRFERGPLGVLLFKLGVFTRGQLGLIDIIFQYIHCDEIYEAINILSSMNWDTLGHQCFI
Sbjct: 463 FLRFERGPLGVLLFKLGVFTRGQLGLIDIIFQYIHCDEIYEAINILSSMNWDTLGHQCFI 522

Query: 364 SMSAIVNHLLRQKLTPEREAQLETSLGTFYAPTRPLLDSTILEYRDQISKYARRFFHHLL 423
           SMSAIVNHLLRQKLTPEREAQLETSLGTFYAPTRPLLDSTILEYRDQISKYARRFFHHLL
Sbjct: 523 SMSAIVNHLLRQKLTPEREAQLETSLGTFYAPTRPLLDSTILEYRDQISKYARRFFHHLL 582

Query: 424 RYQRFEKAFLLAVDVGARDLFMDIHYLALDKGELALAEVARKRASDIDAESITSGVELLG 483
           RYQRFEKAFLLAVDVGARDLFMDIHYLALDKGELALAEVARKRASDIDAESITSGVELLG
Sbjct: 583 RYQRFEKAFLLAVDVGARDLFMDIHYLALDKGELALAEVARKRASDIDAESITSGVELLG 642

Query: 484 PLDRGDMLNEAFIGLSLAPQGEDSFPDNLPPSCPTHRHILQQRILNGSSNRQIIDRRNEL 543
           PLDRGDMLNEAFIGLSLAPQGEDSFPDNLPPSCPTHRHILQQRILNGSSNRQIIDRRNEL
Sbjct: 643 PLDRGDMLNEAFIGLSLAPQGEDSFPDNLPPSCPTHRHILQQRILNGSSNRQIIDRRNEL 702

Query: 544 EKDICSGFLMTNTCNAEDGELREDGREQEIRDGGSLKMIHFGLV 587
           EKDICSGFLMTNTCNAEDGELREDGREQEIRDGGSLKMIHFGLV
Sbjct: 703 EKDICSGFLMTNTCNAEDGELREDGREQEIRDGGSLKMIHFGLV 746


>gi|75709220 cleavage stimulation factor subunit 1 [Homo sapiens]
          Length = 431

 Score = 33.9 bits (76), Expect = 0.43
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 6/64 (9%)

Query: 189 TEDKLILGCEDSSLILYE-----THRRVTLLAQTELLPSLISCHPSGAILLVGSNQGELQ 243
           TE  L  G  D +L L++       R    + + E+L S IS HPSG  +LVG+    L+
Sbjct: 184 TEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRS-ISFHPSGDFILVGTQHPTLR 242

Query: 244 IFDM 247
           ++D+
Sbjct: 243 LYDI 246


>gi|4557491 cleavage stimulation factor subunit 1 [Homo sapiens]
          Length = 431

 Score = 33.9 bits (76), Expect = 0.43
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 6/64 (9%)

Query: 189 TEDKLILGCEDSSLILYE-----THRRVTLLAQTELLPSLISCHPSGAILLVGSNQGELQ 243
           TE  L  G  D +L L++       R    + + E+L S IS HPSG  +LVG+    L+
Sbjct: 184 TEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRS-ISFHPSGDFILVGTQHPTLR 242

Query: 244 IFDM 247
           ++D+
Sbjct: 243 LYDI 246


>gi|75709217 cleavage stimulation factor subunit 1 [Homo sapiens]
          Length = 431

 Score = 33.9 bits (76), Expect = 0.43
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 6/64 (9%)

Query: 189 TEDKLILGCEDSSLILYE-----THRRVTLLAQTELLPSLISCHPSGAILLVGSNQGELQ 243
           TE  L  G  D +L L++       R    + + E+L S IS HPSG  +LVG+    L+
Sbjct: 184 TEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRS-ISFHPSGDFILVGTQHPTLR 242

Query: 244 IFDM 247
           ++D+
Sbjct: 243 LYDI 246


>gi|206597470 neural precursor cell expressed, developmentally
           down-regulated 1 isoform c [Homo sapiens]
          Length = 571

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)

Query: 199 DSSLILYETHRRV---TLLAQTELLPSLISCHPSGAILLVGSNQGELQIFDMAL--SPIN 253
           D  +ILY+T  +    TL+A T L  + +   P GA L +GS++G++  +D+ +  SP+ 
Sbjct: 139 DKRIILYDTSSKKLVKTLVADTPL--TAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVK 196

Query: 254 IQLLAEDRLPRETLQFSKLFDASS 277
                +  +     Q+S +   SS
Sbjct: 197 TISAHKTSVQCIAFQYSTVLTKSS 220


>gi|206597468 neural precursor cell expressed, developmentally
           down-regulated 1 isoform b [Homo sapiens]
          Length = 660

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)

Query: 199 DSSLILYETHRRV---TLLAQTELLPSLISCHPSGAILLVGSNQGELQIFDMAL--SPIN 253
           D  +ILY+T  +    TL+A T L  + +   P GA L +GS++G++  +D+ +  SP+ 
Sbjct: 228 DKRIILYDTSSKKLVKTLVADTPL--TAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVK 285

Query: 254 IQLLAEDRLPRETLQFSKLFDASS 277
                +  +     Q+S +   SS
Sbjct: 286 TISAHKTSVQCIAFQYSTVLTKSS 309


>gi|23097254 neural precursor cell expressed, developmentally
           down-regulated 1 isoform b [Homo sapiens]
          Length = 660

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)

Query: 199 DSSLILYETHRRV---TLLAQTELLPSLISCHPSGAILLVGSNQGELQIFDMAL--SPIN 253
           D  +ILY+T  +    TL+A T L  + +   P GA L +GS++G++  +D+ +  SP+ 
Sbjct: 228 DKRIILYDTSSKKLVKTLVADTPL--TAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVK 285

Query: 254 IQLLAEDRLPRETLQFSKLFDASS 277
                +  +     Q+S +   SS
Sbjct: 286 TISAHKTSVQCIAFQYSTVLTKSS 309


>gi|206597465 neural precursor cell expressed, developmentally
           down-regulated 1 isoform a [Homo sapiens]
          Length = 667

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)

Query: 199 DSSLILYETHRRV---TLLAQTELLPSLISCHPSGAILLVGSNQGELQIFDMAL--SPIN 253
           D  +ILY+T  +    TL+A T L  + +   P GA L +GS++G++  +D+ +  SP+ 
Sbjct: 235 DKRIILYDTSSKKLVKTLVADTPL--TAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVK 292

Query: 254 IQLLAEDRLPRETLQFSKLFDASS 277
                +  +     Q+S +   SS
Sbjct: 293 TISAHKTSVQCIAFQYSTVLTKSS 316


>gi|74229017 2'-5'-oligoadenylate synthetase 2 isoform 2 [Homo
           sapiens]
          Length = 687

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 7/74 (9%)

Query: 15  IILSFLAQNKLCFIQFTKKME-----SSDVNKRLEKLSALDYKIFYYEIPGPINKTTERH 69
           II +FL +N  CF Q T K++     S+     L+  S  D  +F+  +    ++  ERH
Sbjct: 372 IIRTFLKEN--CFRQSTAKIQIVRGGSTAKGTALKTGSDADLVVFHNSLKSYTSQKNERH 429

Query: 70  LAINCVHDRVVCWW 83
             +  +H+++  +W
Sbjct: 430 KIVKEIHEQLKAFW 443


>gi|74229019 2'-5'-oligoadenylate synthetase 2 isoform 1 [Homo
           sapiens]
          Length = 719

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 7/74 (9%)

Query: 15  IILSFLAQNKLCFIQFTKKME-----SSDVNKRLEKLSALDYKIFYYEIPGPINKTTERH 69
           II +FL +N  CF Q T K++     S+     L+  S  D  +F+  +    ++  ERH
Sbjct: 372 IIRTFLKEN--CFRQSTAKIQIVRGGSTAKGTALKTGSDADLVVFHNSLKSYTSQKNERH 429

Query: 70  LAINCVHDRVVCWW 83
             +  +H+++  +W
Sbjct: 430 KIVKEIHEQLKAFW 443


>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
          Length = 428

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 8/61 (13%)

Query: 278 SLVQMQWIAPQVVSQKGEGSDIYDLLFLRFERGPLGVLLFKL-----GVFTRGQLGLIDI 332
           S VQ+ W+A   + Q+G G    D + L +ERG  G ++F        V      G +DI
Sbjct: 110 STVQVSWLA---LIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDI 166

Query: 333 I 333
           +
Sbjct: 167 V 167


>gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens]
          Length = 1805

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 8/112 (7%)

Query: 151 KEPMADSCIYECIRNKIQCVSVTRIPLKSKAISCCRNVTEDKLILGCEDSSLILYETHRR 210
           K+    SC  EC+R    C   T    + +      N   + L  GC+  S+++ E+  +
Sbjct: 31  KKAPVKSCT-ECVRVDKDCAYCTDEMFRDRRC----NTQAELLAAGCQRESIVVMESSFQ 85

Query: 211 VTLLAQTELLPSLISCHPSGAILLVGSNQG---ELQIFDMALSPINIQLLAE 259
           +T   Q +         P G  + +   +    EL++F+   SP+++ +L +
Sbjct: 86  ITEETQIDTTLRRSQMSPQGLRVRLRPGEERHFELEVFEPLESPVDLYILMD 137


>gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens]
          Length = 1822

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 8/112 (7%)

Query: 151 KEPMADSCIYECIRNKIQCVSVTRIPLKSKAISCCRNVTEDKLILGCEDSSLILYETHRR 210
           K+    SC  EC+R    C   T    + +      N   + L  GC+  S+++ E+  +
Sbjct: 31  KKAPVKSCT-ECVRVDKDCAYCTDEMFRDRRC----NTQAELLAAGCQRESIVVMESSFQ 85

Query: 211 VTLLAQTELLPSLISCHPSGAILLVGSNQG---ELQIFDMALSPINIQLLAE 259
           +T   Q +         P G  + +   +    EL++F+   SP+++ +L +
Sbjct: 86  ITEETQIDTTLRRSQMSPQGLRVRLRPGEERHFELEVFEPLESPVDLYILMD 137


>gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens]
          Length = 1752

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 8/112 (7%)

Query: 151 KEPMADSCIYECIRNKIQCVSVTRIPLKSKAISCCRNVTEDKLILGCEDSSLILYETHRR 210
           K+    SC  EC+R    C   T    + +      N   + L  GC+  S+++ E+  +
Sbjct: 31  KKAPVKSCT-ECVRVDKDCAYCTDEMFRDRRC----NTQAELLAAGCQRESIVVMESSFQ 85

Query: 211 VTLLAQTELLPSLISCHPSGAILLVGSNQG---ELQIFDMALSPINIQLLAE 259
           +T   Q +         P G  + +   +    EL++F+   SP+++ +L +
Sbjct: 86  ITEETQIDTTLRRSQMSPQGLRVRLRPGEERHFELEVFEPLESPVDLYILMD 137


>gi|223005862 echinoderm microtubule associated protein like 6 [Homo
           sapiens]
          Length = 1958

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 31/177 (17%)

Query: 78  RVVCWWP----LVNDDAWPWAPISSEKDRANLLLLGYAQGRLEVLSSVRTEWDPLDVRFG 133
           R VCW          D+  +  I  E+D+  L+L G+ +G L  L+              
Sbjct: 287 RSVCWKADRLLAGTQDSEIFEVIVRERDKPMLILQGHCEGELWALA------------LH 334

Query: 134 TKQPYQVFTVEHSVSVDKEPMADSCIYECIRNKIQCVSVTRIPLKSKAISCCRNVTEDKL 193
            K+P  V T     SV    +AD  +            + R  ++    S   +    +L
Sbjct: 335 PKKPLAV-TGSDDRSVRLWSLADHAL------------IARCNMEEAVRSVAFSPDGSQL 381

Query: 194 ILGCEDSSLILYETH--RRVTLLAQTELLPSLISCHPSGAILLVGSNQGELQIFDMA 248
            LG +D S I+        V  +   + +   +   P G+ L VGSN G + ++ +A
Sbjct: 382 ALGMKDGSFIVLRVRDMTEVVHIKDRKEVIHEMKFSPDGSYLAVGSNDGPVDVYAVA 438


>gi|50053006 olfactory receptor, family 2, subfamily D, member 2
           [Homo sapiens]
          Length = 308

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)

Query: 366 SAIVNHLLRQKLTPEREAQLETSLGTFYAPTRPLLDSTILEYRDQISKYARR 417
           SAI+ ++     TP+   Q E S+  FYA   P+L+  I   R++  K A R
Sbjct: 254 SAIITYM-----TPKSSKQQEKSVSVFYAIVTPMLNPLIYSLRNKDVKAALR 300


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,815,135
Number of Sequences: 37866
Number of extensions: 897095
Number of successful extensions: 2103
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2096
Number of HSP's gapped (non-prelim): 22
length of query: 587
length of database: 18,247,518
effective HSP length: 108
effective length of query: 479
effective length of database: 14,157,990
effective search space: 6781677210
effective search space used: 6781677210
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.