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Search of human proteins with 169214175
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169214175 PREDICTED: hypothetical protein [Homo sapiens]
(73 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169214175 PREDICTED: hypothetical protein [Homo sapiens] 151 1e-37
gi|169213636 PREDICTED: hypothetical protein [Homo sapiens] 151 1e-37
gi|239753670 PREDICTED: hypothetical protein [Homo sapiens] 145 7e-36
gi|239748307 PREDICTED: hypothetical protein XP_002346583 [Homo ... 145 7e-36
gi|239742205 PREDICTED: hypothetical protein XP_002342425 [Homo ... 145 7e-36
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 33 0.048
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 33 0.048
gi|148746195 trichohyalin [Homo sapiens] 32 0.14
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 30 0.53
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 30 0.53
gi|52426743 cisplatin resistance-associated overexpressed protei... 28 1.2
gi|19923485 cisplatin resistance-associated overexpressed protei... 28 1.2
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 28 1.5
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 28 2.0
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 28 2.0
gi|149192855 HLA-B associated transcript 2-like [Homo sapiens] 28 2.0
gi|33342278 TraB domain containing [Homo sapiens] 28 2.0
gi|14211845 IMP2 inner mitochondrial membrane protease-like [Hom... 27 2.6
gi|11641413 cell division cycle 25B isoform 1 [Homo sapiens] 27 2.6
gi|11641411 cell division cycle 25B isoform 3 [Homo sapiens] 27 2.6
gi|4757950 cell division cycle 25B isoform 2 [Homo sapiens] 27 2.6
gi|78000158 eukaryotic translation initiation factor 2B, subunit... 27 2.6
gi|78000156 eukaryotic translation initiation factor 2B, subunit... 27 2.6
gi|187607323 eukaryotic translation initiation factor 2B, subuni... 27 2.6
gi|191252782 p21-activated kinase 6 [Homo sapiens] 27 2.6
gi|191252780 p21-activated kinase 6 [Homo sapiens] 27 2.6
gi|9910476 p21-activated kinase 6 [Homo sapiens] 27 2.6
gi|211059425 hypothetical protein LOC284422 [Homo sapiens] 27 2.6
gi|120953300 leucine-rich repeats and IQ motif containing 1 isof... 27 2.6
gi|120953243 leucine-rich repeats and IQ motif containing 1 isof... 27 2.6
>gi|169214175 PREDICTED: hypothetical protein [Homo sapiens]
Length = 73
Score = 151 bits (381), Expect = 1e-37
Identities = 73/73 (100%), Positives = 73/73 (100%)
Query: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERLRKR 60
MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERLRKR
Sbjct: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERLRKR 60
Query: 61 REEKLLRDAQQNS 73
REEKLLRDAQQNS
Sbjct: 61 REEKLLRDAQQNS 73
>gi|169213636 PREDICTED: hypothetical protein [Homo sapiens]
Length = 73
Score = 151 bits (381), Expect = 1e-37
Identities = 73/73 (100%), Positives = 73/73 (100%)
Query: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERLRKR 60
MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERLRKR
Sbjct: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERLRKR 60
Query: 61 REEKLLRDAQQNS 73
REEKLLRDAQQNS
Sbjct: 61 REEKLLRDAQQNS 73
>gi|239753670 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 145 bits (366), Expect = 7e-36
Identities = 72/75 (96%), Positives = 73/75 (97%), Gaps = 2/75 (2%)
Query: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERL--R 58
MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQE+EEFKERL R
Sbjct: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR 60
Query: 59 KRREEKLLRDAQQNS 73
KRREEKLLRDAQQNS
Sbjct: 61 KRREEKLLRDAQQNS 75
>gi|239748307 PREDICTED: hypothetical protein XP_002346583 [Homo
sapiens]
Length = 75
Score = 145 bits (366), Expect = 7e-36
Identities = 72/75 (96%), Positives = 73/75 (97%), Gaps = 2/75 (2%)
Query: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERL--R 58
MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQE+EEFKERL R
Sbjct: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR 60
Query: 59 KRREEKLLRDAQQNS 73
KRREEKLLRDAQQNS
Sbjct: 61 KRREEKLLRDAQQNS 75
>gi|239742205 PREDICTED: hypothetical protein XP_002342425 [Homo
sapiens]
Length = 75
Score = 145 bits (366), Expect = 7e-36
Identities = 72/75 (96%), Positives = 73/75 (97%), Gaps = 2/75 (2%)
Query: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERL--R 58
MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQE+EEFKERL R
Sbjct: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR 60
Query: 59 KRREEKLLRDAQQNS 73
KRREEKLLRDAQQNS
Sbjct: 61 KRREEKLLRDAQQNS 75
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 33.1 bits (74), Expect = 0.048
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 22 WVSNQAEWFEDDVIQRKRELWPPEKLQEIE----EFKERLRKRRE 62
W + EW + + ++K +LW EK+QE E E +E++R + E
Sbjct: 481 WEQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEE 525
Score = 33.1 bits (74), Expect = 0.048
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 22 WVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERLRKRREEK 64
W + W + + ++K +LW EK+QE E+ E+ K R+++
Sbjct: 758 WEQEEKMWEQQRLPEQKEKLWEHEKMQEQEKIWEQEEKMRDQE 800
Score = 32.7 bits (73), Expect = 0.063
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 22 WVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERLRKRREEKLLRDAQQ 71
W + W + + ++K +LW EK+QE E+ +E+ K E++ + Q
Sbjct: 648 WEQEEKMWEQQRLPEQKEKLWEHEKMQEQEKMQEQEEKIWEQEKMEKKTQ 697
Score = 32.3 bits (72), Expect = 0.082
Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 26 QAEWFEDDVIQRKRELWPPEKLQEIEEFKERLRK-RREEKLLRDAQQ 71
+ E E +++++ W EK++E E +ER +K R EE+++R+ ++
Sbjct: 688 EQEKMEKKTQEQEKKTWDQEKMREEESMREREKKMREEEEMMREQEE 734
Score = 29.3 bits (64), Expect = 0.69
Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 25 NQAEWFEDDVIQRKRELWPPE-KLQEIEEFKERLRK-RREEKLLRDAQQ 71
+Q E E +++++ W E K++E E +ER +K R EE+++R+ ++
Sbjct: 562 DQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEE 610
Score = 26.9 bits (58), Expect = 3.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 36 QRKRELWPPEKLQEIEEFKERLRKRREEK 64
Q K+ EK+QE E +ER +K REE+
Sbjct: 435 QEKKTRDQEEKMQEEERIREREKKMREEE 463
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 33.1 bits (74), Expect = 0.048
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 22 WVSNQAEWFEDDVIQRKRELWPPEKLQEIE----EFKERLRKRRE 62
W + EW + + ++K +LW EK+QE E E +E++R + E
Sbjct: 423 WEQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEE 467
Score = 29.3 bits (64), Expect = 0.69
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 8/44 (18%)
Query: 29 WFEDDVIQRKRE-------LWPPE-KLQEIEEFKERLRKRREEK 64
W +D+ ++ K E +W E K+QE E +ER +K REE+
Sbjct: 362 WEQDERLREKEERMREQEKMWEQEEKMQEEERIREREKKMREEE 405
Score = 27.3 bits (59), Expect = 2.6
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 22 WVSNQAEWFEDDVIQRKRELWPPE-KLQEIEEFKERLRK-RREEKLLRDAQQ 71
W + E +++++ W E K++E E +ER +K R EE+++R+ ++
Sbjct: 530 WQQEEKMREEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEE 581
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 31.6 bits (70), Expect = 0.14
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 20 MFWVSNQAEWFEDDVIQRKRELW----PPEKLQEIEEFKERLRKRREEKLLRDAQQ 71
+F + EW + + + RK E P++ +E++E +E+LRK ++L R+ Q+
Sbjct: 237 VFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQE 292
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
b [Homo sapiens]
Length = 1524
Score = 29.6 bits (65), Expect = 0.53
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 36 QRKRELWPPEKLQEIEEFKERLRKRREEKLLRDAQQ 71
Q REL + +E EE R+RKR+EEKL Q+
Sbjct: 614 QEFRELKAEQHRKEREEAAARIRKRKEEKLKEQEQK 649
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 29.6 bits (65), Expect = 0.53
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 36 QRKRELWPPEKLQEIEEFKERLRKRREEKLLRDAQQ 71
Q REL + +E EE R+RKR+EEKL Q+
Sbjct: 646 QEFRELKAEQHRKEREEAAARIRKRKEEKLKEQEQK 681
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 28.5 bits (62), Expect = 1.2
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 21 FWVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERLRKR-----REEKLLRDAQQ 71
F + A+ DD + K+ + + +EE KE+LRKR R+E+L ++ Q+
Sbjct: 198 FLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDRDERLKKEKQE 253
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 28.5 bits (62), Expect = 1.2
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 21 FWVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERLRKR-----REEKLLRDAQQ 71
F + A+ DD + K+ + + +EE KE+LRKR R+E+L ++ Q+
Sbjct: 198 FLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDRDERLKKEKQE 253
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 28.1 bits (61), Expect = 1.5
Identities = 13/45 (28%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 29 WFEDDVIQRKRELW-PPEKLQEIEE-FKERLRKRREEKLLRDAQQ 71
W +++ I+ + E+W EK+ E E+ ++E R+ +E+K+ R ++
Sbjct: 534 WRQEEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDKMWRQEEK 578
Score = 27.7 bits (60), Expect = 2.0
Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 9/52 (17%)
Query: 29 WFEDDVIQRKREL-WPPE--------KLQEIEEFKERLRKRREEKLLRDAQQ 71
W +++ ++R+ E+ W E K+ E E+ +E+ KR+EE+ +R+ ++
Sbjct: 373 WEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEK 424
Score = 27.3 bits (59), Expect = 2.6
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 29 WFEDDVIQRKRELWPPEKLQEIEE---FKERLRKRREEKLLRDAQQ 71
W E++ + + ++W EK QE E+ +E + +EEK+ R ++
Sbjct: 547 WREEEKMHEQEKIWEEEKRQEQEDKMWRQEEKIREQEEKVWRQEEK 592
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 27.7 bits (60), Expect = 2.0
Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 9/52 (17%)
Query: 29 WFEDDVIQRKREL-WPPE--------KLQEIEEFKERLRKRREEKLLRDAQQ 71
W +++ ++R+ E+ W E K+ E E+ +E+ KR+EE+ +R+ ++
Sbjct: 326 WEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEK 377
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 27.7 bits (60), Expect = 2.0
Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 9/52 (17%)
Query: 29 WFEDDVIQRKREL-WPPE--------KLQEIEEFKERLRKRREEKLLRDAQQ 71
W +++ ++R+ E+ W E K+ E E+ +E+ KR+EE+ +R+ ++
Sbjct: 420 WEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEK 471
>gi|149192855 HLA-B associated transcript 2-like [Homo sapiens]
Length = 2229
Score = 27.7 bits (60), Expect = 2.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 24 SNQAEWFEDDVIQRKRELWPPEKL---QEIEEFKERLRKRREEKLLRDAQQ 71
S+ F I+ K + PP + E+ E ER RKRREE+ R ++
Sbjct: 470 SSMGSMFRQQSIEDKEDKPPPRQKFIQSEMSEAVERARKRREEEERRAREE 520
>gi|33342278 TraB domain containing [Homo sapiens]
Length = 376
Score = 27.7 bits (60), Expect = 2.0
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 33 DVIQRKRELWPPEKLQEIEEFKERLRKRREEKLLRDAQQNS 73
DV++ RE+ P + E+ +++ + K E LLR+AQ+ S
Sbjct: 90 DVVKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELS 130
>gi|14211845 IMP2 inner mitochondrial membrane protease-like [Homo
sapiens]
Length = 175
Score = 27.3 bits (59), Expect = 2.6
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Query: 41 LWPPEKLQEIEEF--KERLRKRREEK 64
LWPPE+ Q++E ERL +REE+
Sbjct: 150 LWPPERWQKLESVLPPERLPVQREEE 175
>gi|11641413 cell division cycle 25B isoform 1 [Homo sapiens]
Length = 580
Score = 27.3 bits (59), Expect = 2.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 36 QRKRELWPPEKLQEIEEFKERLRKRREEKLLRDAQQN 72
+R+R + PPE+ QE EE K R+ R + L D +N
Sbjct: 349 KRRRSVTPPEEQQEAEEPKARV--LRSKSLCHDEIEN 383
>gi|11641411 cell division cycle 25B isoform 3 [Homo sapiens]
Length = 539
Score = 27.3 bits (59), Expect = 2.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 36 QRKRELWPPEKLQEIEEFKERLRKRREEKLLRDAQQN 72
+R+R + PPE+ QE EE K R+ R + L D +N
Sbjct: 308 KRRRSVTPPEEQQEAEEPKARV--LRSKSLCHDEIEN 342
>gi|4757950 cell division cycle 25B isoform 2 [Homo sapiens]
Length = 566
Score = 27.3 bits (59), Expect = 2.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 36 QRKRELWPPEKLQEIEEFKERLRKRREEKLLRDAQQN 72
+R+R + PPE+ QE EE K R+ R + L D +N
Sbjct: 335 KRRRSVTPPEEQQEAEEPKARV--LRSKSLCHDEIEN 369
>gi|78000158 eukaryotic translation initiation factor 2B, subunit
4 delta isoform 2 [Homo sapiens]
Length = 523
Score = 27.3 bits (59), Expect = 2.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 39 RELWPPEKLQEIEEFKERLRKRREEK 64
RE+ EKLQ +E K++ +KR+EEK
Sbjct: 29 REMTKEEKLQLRKEKKQQKKKRKEEK 54
>gi|78000156 eukaryotic translation initiation factor 2B, subunit
4 delta isoform 3 [Homo sapiens]
Length = 522
Score = 27.3 bits (59), Expect = 2.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 39 RELWPPEKLQEIEEFKERLRKRREEK 64
RE+ EKLQ +E K++ +KR+EEK
Sbjct: 29 REMTKEEKLQLRKEKKQQKKKRKEEK 54
>gi|187607323 eukaryotic translation initiation factor 2B, subunit
4 delta isoform 1 [Homo sapiens]
Length = 543
Score = 27.3 bits (59), Expect = 2.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 39 RELWPPEKLQEIEEFKERLRKRREEK 64
RE+ EKLQ +E K++ +KR+EEK
Sbjct: 50 REMTKEEKLQLRKEKKQQKKKRKEEK 75
>gi|191252782 p21-activated kinase 6 [Homo sapiens]
Length = 681
Score = 27.3 bits (59), Expect = 2.6
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 23 VSNQAEWFEDDVIQRKRELW--PPEKLQEIEEFKERLRKRREEKLLRDAQQNS 73
V + +F D +Q + L PP KL+ + LR E L+RD Q+ +
Sbjct: 595 VDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERA 647
>gi|191252780 p21-activated kinase 6 [Homo sapiens]
Length = 681
Score = 27.3 bits (59), Expect = 2.6
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 23 VSNQAEWFEDDVIQRKRELW--PPEKLQEIEEFKERLRKRREEKLLRDAQQNS 73
V + +F D +Q + L PP KL+ + LR E L+RD Q+ +
Sbjct: 595 VDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERA 647
>gi|9910476 p21-activated kinase 6 [Homo sapiens]
Length = 681
Score = 27.3 bits (59), Expect = 2.6
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 23 VSNQAEWFEDDVIQRKRELW--PPEKLQEIEEFKERLRKRREEKLLRDAQQNS 73
V + +F D +Q + L PP KL+ + LR E L+RD Q+ +
Sbjct: 595 VDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERA 647
>gi|211059425 hypothetical protein LOC284422 [Homo sapiens]
Length = 130
Score = 27.3 bits (59), Expect = 2.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 8 FRMIIYLTFPVAMFWVSN-QAEWFEDDVIQRKRELW--PPEKLQEIEEFKERLRKRREEK 64
F I+YL W S +AE E+ + + L+ E +E +E KE+ KR++EK
Sbjct: 41 FLFIVYLVLLANRLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEK 100
>gi|120953300 leucine-rich repeats and IQ motif containing 1 isoform
1 [Homo sapiens]
Length = 1722
Score = 27.3 bits (59), Expect = 2.6
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 28 EWFEDDVIQRKRELWPPEKLQEIEEFKERLRKRREEKLLR 67
EW E + R++E ++L+E + KE +K++EE+ R
Sbjct: 320 EWKEKEAKIRQKEEENRKRLEEEQRIKEERKKQKEEERKR 359
>gi|120953243 leucine-rich repeats and IQ motif containing 1 isoform
2 [Homo sapiens]
Length = 1336
Score = 27.3 bits (59), Expect = 2.6
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 28 EWFEDDVIQRKRELWPPEKLQEIEEFKERLRKRREEKLLR 67
EW E + R++E ++L+E + KE +K++EE+ R
Sbjct: 320 EWKEKEAKIRQKEEENRKRLEEEQRIKEERKKQKEEERKR 359
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.138 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,742,625
Number of Sequences: 37866
Number of extensions: 103119
Number of successful extensions: 1006
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 900
Number of HSP's gapped (non-prelim): 117
length of query: 73
length of database: 18,247,518
effective HSP length: 46
effective length of query: 27
effective length of database: 16,505,682
effective search space: 445653414
effective search space used: 445653414
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.