Search of human proteins with 169213766

Search of human proteins with 169213766

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169213766 PREDICTED: similar to hCG1642820 [Homo sapiens]
         (87 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169213766 PREDICTED: similar to hCG1642820 [Homo sapiens]          195   6e-51
gi|7669492 glyceraldehyde-3-phosphate dehydrogenase [Homo sapiens]     77   4e-15
gi|7657116 glyceraldehyde-3-phosphate dehydrogenase, spermatogen...    57   4e-09
gi|206597487 solute carrier family 5 (sodium/glucose cotransport...    30   0.53 
gi|206597483 solute carrier family 5 (sodium/glucose cotransport...    30   0.53 
gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo ...    28   1.6  
gi|217330559 unc-51-like kinase 2 [Homo sapiens]                       26   5.9  
gi|217330557 unc-51-like kinase 2 [Homo sapiens]                       26   5.9  
gi|38156705 microphthalmia-associated transcription factor isofo...    26   7.7  
gi|38156703 microphthalmia-associated transcription factor isofo...    26   7.7  
gi|38156701 microphthalmia-associated transcription factor isofo...    26   7.7  
gi|38156699 microphthalmia-associated transcription factor isofo...    26   7.7  

>gi|169213766 PREDICTED: similar to hCG1642820 [Homo sapiens]
          Length = 87

 Score =  195 bits (496), Expect = 6e-51
 Identities = 87/87 (100%), Positives = 87/87 (100%)

Query: 1  MEGLMTTAPLGNWRDKHHPCIYWHGQGCGQIPALNRKLTGTAFRVPATNVLVVDPTCHLE 60
          MEGLMTTAPLGNWRDKHHPCIYWHGQGCGQIPALNRKLTGTAFRVPATNVLVVDPTCHLE
Sbjct: 1  MEGLMTTAPLGNWRDKHHPCIYWHGQGCGQIPALNRKLTGTAFRVPATNVLVVDPTCHLE 60

Query: 61 KPAKYHDLKKVVKQALGGPPQGHPGLH 87
          KPAKYHDLKKVVKQALGGPPQGHPGLH
Sbjct: 61 KPAKYHDLKKVVKQALGGPPQGHPGLH 87


>gi|7669492 glyceraldehyde-3-phosphate dehydrogenase [Homo sapiens]
          Length = 335

 Score = 76.6 bits (187), Expect = 4e-15
 Identities = 51/102 (50%), Positives = 56/102 (54%), Gaps = 20/102 (19%)

Query: 1   MEGLMTTA------------PLGN-WRDKHH------PCIYWHGQGCGQ-IPALNRKLTG 40
           +EGLMTT             P G  WRD         P      +  G+ IP LN KLTG
Sbjct: 171 VEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTG 230

Query: 41  TAFRVPATNVLVVDPTCHLEKPAKYHDLKKVVKQALGGPPQG 82
            AFRVP  NV VVD TC LEKPAKY D+KKVVKQA  GP +G
Sbjct: 231 MAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKG 272


>gi|7657116 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
           [Homo sapiens]
          Length = 408

 Score = 56.6 bits (135), Expect = 4e-09
 Identities = 29/52 (55%), Positives = 33/52 (63%)

Query: 31  IPALNRKLTGTAFRVPATNVLVVDPTCHLEKPAKYHDLKKVVKQALGGPPQG 82
           IP L  KLTG AFRVP  +V VVD TC L +PA Y  +K+ VK A  GP  G
Sbjct: 293 IPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAG 344


>gi|206597487 solute carrier family 5 (sodium/glucose
           cotransporter), member 9 isoform 1 [Homo sapiens]
          Length = 706

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 26  QGCGQIPALNRKLTGTAFRVPATNVLVVDPTCHLEKPAKYHDLKKVVKQALGGP 79
           Q  G  P L ++     +R    NV V + TCHL +P  +H L+  V   +  P
Sbjct: 258 QDVGWYPGLEQR-----YRQAIPNVTVPNTTCHLPRPDAFHILRDPVSGDIPWP 306


>gi|206597483 solute carrier family 5 (sodium/glucose
           cotransporter), member 9 isoform 2 [Homo sapiens]
          Length = 681

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 26  QGCGQIPALNRKLTGTAFRVPATNVLVVDPTCHLEKPAKYHDLKKVVKQALGGP 79
           Q  G  P L ++     +R    NV V + TCHL +P  +H L+  V   +  P
Sbjct: 233 QDVGWYPGLEQR-----YRQAIPNVTVPNTTCHLPRPDAFHILRDPVSGDIPWP 281


>gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo
          sapiens]
          Length = 1281

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query: 18 HPCIYWHGQGCGQIPALNRKLTGTAFRVPATNVLVVDPTCHL 59
          HPCI W G GC +IP L       A      N+ V+    HL
Sbjct: 27 HPCIMWTG-GCRRIPVL--VFHADAILTKDNNIRVIGERYHL 65


>gi|217330559 unc-51-like kinase 2 [Homo sapiens]
          Length = 1036

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 55  PTCHLEKPAKYHDLKKVVKQALGGPPQGHP 84
           P+C    P    D++ + ++ L  PP G P
Sbjct: 300 PSCRFASPPSLPDMQHIQEENLSSPPLGPP 329


>gi|217330557 unc-51-like kinase 2 [Homo sapiens]
          Length = 1036

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 55  PTCHLEKPAKYHDLKKVVKQALGGPPQGHP 84
           P+C    P    D++ + ++ L  PP G P
Sbjct: 300 PSCRFASPPSLPDMQHIQEENLSSPPLGPP 329


>gi|38156705 microphthalmia-associated transcription factor isoform
           6 [Homo sapiens]
          Length = 495

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 30  QIPALNRKLTGTAFRVPATNVLVVDPTCHLEKPAKYH 66
           Q PA+N  +  T        + V+    HLE P KYH
Sbjct: 69  QTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYH 105


>gi|38156703 microphthalmia-associated transcription factor isoform
           2 [Homo sapiens]
          Length = 504

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 30  QIPALNRKLTGTAFRVPATNVLVVDPTCHLEKPAKYH 66
           Q PA+N  +  T        + V+    HLE P KYH
Sbjct: 78  QTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYH 114


>gi|38156701 microphthalmia-associated transcription factor isoform
           3 [Homo sapiens]
          Length = 519

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 30  QIPALNRKLTGTAFRVPATNVLVVDPTCHLEKPAKYH 66
           Q PA+N  +  T        + V+    HLE P KYH
Sbjct: 93  QTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYH 129


>gi|38156699 microphthalmia-associated transcription factor isoform
           1 [Homo sapiens]
          Length = 520

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 30  QIPALNRKLTGTAFRVPATNVLVVDPTCHLEKPAKYH 66
           Q PA+N  +  T        + V+    HLE P KYH
Sbjct: 94  QTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYH 130


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.140    0.479 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,447,629
Number of Sequences: 37866
Number of extensions: 183827
Number of successful extensions: 325
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 314
Number of HSP's gapped (non-prelim): 12
length of query: 87
length of database: 18,247,518
effective HSP length: 59
effective length of query: 28
effective length of database: 16,013,424
effective search space: 448375872
effective search space used: 448375872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.