LOC390282 8429

Name: LOC390282	Sequence: fasta or formatted (126aa)		NCBI GI: 169205160
Description: PREDICTED: similar to hCG2040283		Referenced in: Translation Factors
Other entries for this name: alt mRNA [126aa] PREDICTED: hypothetical protein LOC390282 alt mRNA [126aa] PREDICTED: similar to hCG2040283
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 7 1 C cysteine 1.6 2 1 D aspartate 6.3 8 2 E glutamate 3.2 4 1 F phenylalanine 3.2 4 1 G glycine 6.3 8 2 H histidine 0.0 0 0 I isoleucine 6.3 8 1 K lysine 4.0 5 1 L leucine 13.5 17 2 M methionine 3.2 4 1 N asparagine 6.3 8 1 P proline 3.2 4 1 Q glutamine 4.8 6 2 R arginine 4.8 6 1 S serine 6.3 8 1 T threonine 4.8 6 1 V valine 13.5 17 1 W tryptophan 0.0 0 0 Y tyrosine 3.2 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG2040283 LOC390282 1.000 PREDICTED: similar to hCG2040283 LOC390282 1.000 PREDICTED: hypothetical protein LOC390282 EIF3F 0.868 eukaryotic translation initiation factor 3, subunit 5... PSMD7 0.045 proteasome 26S non-ATPase subunit 7 C15orf59 0.027 hypothetical protein LOC388135 COPS6 0.023 COP9 signalosome subunit 6 TP73 0.009 tumor protein p73 isoform d TP73 0.009 tumor protein p73 isoform c TP73 0.009 tumor protein p73 isoform b TP73 0.009 tumor protein p73 isoform a MVP 0.005 major vault protein MVP 0.005 major vault protein TLN1 0.005 talin 1 LEPREL2 0.005 leprecan-like 2 MEPCE 0.005 bin3, bicoid-interacting 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.