Search of human proteins with 169201477

Search of human proteins with 169201477

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169201477 PREDICTED: hypothetical protein [Homo sapiens]
         (132 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169201477 PREDICTED: hypothetical protein [Homo sapiens]           269   4e-73
gi|169201831 PREDICTED: hypothetical protein [Homo sapiens]           263   4e-71
gi|113421750 PREDICTED: hypothetical protein [Homo sapiens]           263   4e-71
gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo sapi...    29   1.2  
gi|116089282 APG9 autophagy 9-like 1 [Homo sapiens]                    27   4.7  
gi|116089287 APG9 autophagy 9-like 1 [Homo sapiens]                    27   4.7  
gi|169165719 PREDICTED: hypothetical protein [Homo sapiens]            27   6.1  
gi|169166115 PREDICTED: hypothetical protein [Homo sapiens]            27   6.1  
gi|169165309 PREDICTED: hypothetical protein [Homo sapiens]            27   6.1  
gi|148596959 hypothetical protein LOC84293 [Homo sapiens]              27   6.1  
gi|22748713 ankyrin repeat domain 9 [Homo sapiens]                     26   8.0  

>gi|169201477 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 132

 Score =  269 bits (688), Expect = 4e-73
 Identities = 132/132 (100%), Positives = 132/132 (100%)

Query: 1   MELPKAIKSIAPGSPAAWKRARCRADALQGKGVSSILFSELSTPWEGQTPGNGIAGSYGS 60
           MELPKAIKSIAPGSPAAWKRARCRADALQGKGVSSILFSELSTPWEGQTPGNGIAGSYGS
Sbjct: 1   MELPKAIKSIAPGSPAAWKRARCRADALQGKGVSSILFSELSTPWEGQTPGNGIAGSYGS 60

Query: 61  SGSCQTPKQFVTSLLFSKSGRVQQGCFFFKEEERDFLQVQNYLQIKFRPTYIKNVSCNEI 120
           SGSCQTPKQFVTSLLFSKSGRVQQGCFFFKEEERDFLQVQNYLQIKFRPTYIKNVSCNEI
Sbjct: 61  SGSCQTPKQFVTSLLFSKSGRVQQGCFFFKEEERDFLQVQNYLQIKFRPTYIKNVSCNEI 120

Query: 121 FLPEKKAVTLIV 132
           FLPEKKAVTLIV
Sbjct: 121 FLPEKKAVTLIV 132


>gi|169201831 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 228

 Score =  263 bits (671), Expect = 4e-71
 Identities = 128/131 (97%), Positives = 130/131 (99%)

Query: 2   ELPKAIKSIAPGSPAAWKRARCRADALQGKGVSSILFSELSTPWEGQTPGNGIAGSYGSS 61
           + P+AIKSIAPGSPAAWKRARCRADALQGKGVSSILFSELSTPWEGQTPGNGIAGSYGSS
Sbjct: 98  QAPEAIKSIAPGSPAAWKRARCRADALQGKGVSSILFSELSTPWEGQTPGNGIAGSYGSS 157

Query: 62  GSCQTPKQFVTSLLFSKSGRVQQGCFFFKEEERDFLQVQNYLQIKFRPTYIKNVSCNEIF 121
           GSCQTPKQFVTSLLFSKSGRVQQGCFFFKEEERDFLQVQNYLQIKFRPTYIKNVSCNEIF
Sbjct: 158 GSCQTPKQFVTSLLFSKSGRVQQGCFFFKEEERDFLQVQNYLQIKFRPTYIKNVSCNEIF 217

Query: 122 LPEKKAVTLIV 132
           LPEKKAVTLIV
Sbjct: 218 LPEKKAVTLIV 228


>gi|113421750 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 228

 Score =  263 bits (671), Expect = 4e-71
 Identities = 128/131 (97%), Positives = 130/131 (99%)

Query: 2   ELPKAIKSIAPGSPAAWKRARCRADALQGKGVSSILFSELSTPWEGQTPGNGIAGSYGSS 61
           + P+AIKSIAPGSPAAWKRARCRADALQGKGVSSILFSELSTPWEGQTPGNGIAGSYGSS
Sbjct: 98  QAPEAIKSIAPGSPAAWKRARCRADALQGKGVSSILFSELSTPWEGQTPGNGIAGSYGSS 157

Query: 62  GSCQTPKQFVTSLLFSKSGRVQQGCFFFKEEERDFLQVQNYLQIKFRPTYIKNVSCNEIF 121
           GSCQTPKQFVTSLLFSKSGRVQQGCFFFKEEERDFLQVQNYLQIKFRPTYIKNVSCNEIF
Sbjct: 158 GSCQTPKQFVTSLLFSKSGRVQQGCFFFKEEERDFLQVQNYLQIKFRPTYIKNVSCNEIF 217

Query: 122 LPEKKAVTLIV 132
           LPEKKAVTLIV
Sbjct: 218 LPEKKAVTLIV 228


>gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo
           sapiens]
          Length = 946

 Score = 28.9 bits (63), Expect = 1.2
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 12  PGSPAAWKRARCRADALQGKGVSSILFSELSTPWEGQTPGN 52
           P SP  W+  R R ++  G G  S   S  S  W G+  G+
Sbjct: 69  PRSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGD 109


>gi|116089282 APG9 autophagy 9-like 1 [Homo sapiens]
          Length = 839

 Score = 26.9 bits (58), Expect = 4.7
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 2   ELPKAIKSIAPGSPAAWKRARCRADALQGKGVSSILFSELSTPWEGQ 48
           E+  A++S +P  P      R  +  + G GV +   S  S+ WEGQ
Sbjct: 647 EVASALRSFSPLQPGQAPTGRAHS-TMTGSGVDARTASSGSSVWEGQ 692


>gi|116089287 APG9 autophagy 9-like 1 [Homo sapiens]
          Length = 839

 Score = 26.9 bits (58), Expect = 4.7
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 2   ELPKAIKSIAPGSPAAWKRARCRADALQGKGVSSILFSELSTPWEGQ 48
           E+  A++S +P  P      R  +  + G GV +   S  S+ WEGQ
Sbjct: 647 EVASALRSFSPLQPGQAPTGRAHS-TMTGSGVDARTASSGSSVWEGQ 692


>gi|169165719 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 154

 Score = 26.6 bits (57), Expect = 6.1
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 5/33 (15%)

Query: 96  FLQVQNYLQIKFRPTY-----IKNVSCNEIFLP 123
           FLQ+ +Y ++K+ PTY     ++ +S  E+ LP
Sbjct: 8   FLQLPSYEEVKYLPTYEESMRLQQLSPGEVVLP 40


>gi|169166115 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 283

 Score = 26.6 bits (57), Expect = 6.1
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 5/33 (15%)

Query: 96  FLQVQNYLQIKFRPTY-----IKNVSCNEIFLP 123
           FLQ+ +Y ++K+ PTY     ++ +S  E+ LP
Sbjct: 226 FLQLPSYEEVKYLPTYEESMRLQQLSPGEVVLP 258


>gi|169165309 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 283

 Score = 26.6 bits (57), Expect = 6.1
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 5/33 (15%)

Query: 96  FLQVQNYLQIKFRPTY-----IKNVSCNEIFLP 123
           FLQ+ +Y ++K+ PTY     ++ +S  E+ LP
Sbjct: 226 FLQLPSYEEVKYLPTYEESMRLQQLSPGEVVLP 258


>gi|148596959 hypothetical protein LOC84293 [Homo sapiens]
          Length = 229

 Score = 26.6 bits (57), Expect = 6.1
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 18/78 (23%)

Query: 67  PKQFVTSLLFSKSGRV-----QQGCFFFKEEERDFLQVQNYLQIKFRPTY---------- 111
           P+ F    L+ K+G V     + GCF  +EE  D   +++ L     P Y          
Sbjct: 61  PRTFKAKELWEKNGAVIMAVRRPGCFLCREEAADLSSLKSMLDQLGVPLYAVVKEHIRTE 120

Query: 112 IKNVS---CNEIFLPEKK 126
           +K+       EIFL EKK
Sbjct: 121 VKDFQPYFKGEIFLDEKK 138


>gi|22748713 ankyrin repeat domain 9 [Homo sapiens]
          Length = 317

 Score = 26.2 bits (56), Expect = 8.0
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 10/56 (17%)

Query: 44 PWEGQTPGNGIAGSYGSSGSCQTPKQFVTSLLFSKSGRVQQGCFFFKEEERDFLQV 99
          PW+ + PG G  G   +SG+ ++  Q           + ++  F F +  RD L V
Sbjct: 2  PWDARRPGGGADGGPEASGAARSRAQ----------KQCRKSSFAFYQAVRDLLPV 47


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,501,577
Number of Sequences: 37866
Number of extensions: 232373
Number of successful extensions: 576
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 572
Number of HSP's gapped (non-prelim): 11
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.