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Search of human proteins with 169179309
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169179309 PREDICTED: similar to tumor protein,
translationally-controlled 1 [Homo sapiens]
(138 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169178083 PREDICTED: similar to tumor protein, translationall... 282 5e-77
gi|169179309 PREDICTED: similar to tumor protein, translationall... 282 5e-77
gi|169181065 PREDICTED: similar to tumor protein, translationall... 280 2e-76
gi|4507669 tumor protein, translationally-controlled 1 [Homo sap... 268 1e-72
gi|46409468 hypothetical protein LOC392490 [Homo sapiens] 176 4e-45
gi|117414135 apoptosis inhibitor [Homo sapiens] 122 9e-29
gi|239752409 PREDICTED: similar to hCG1793821 [Homo sapiens] 109 8e-25
gi|239757896 PREDICTED: similar to hCG1793821 [Homo sapiens] 108 2e-24
gi|239746926 PREDICTED: similar to hCG1793821 [Homo sapiens] 107 3e-24
gi|17136143 olfactomedin related ER localized protein isoform 1 ... 30 0.63
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 28 1.8
gi|4809279 annexin VII isoform 2 [Homo sapiens] 28 3.1
gi|4502111 annexin VII isoform 1 [Homo sapiens] 28 3.1
gi|45597177 TBC1 domain family, member 9B (with GRAM domain) iso... 27 4.1
gi|45597175 TBC1 domain family, member 9B (with GRAM domain) iso... 27 4.1
gi|105990532 apolipoprotein B precursor [Homo sapiens] 27 5.4
gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens] 27 7.0
gi|41352705 kinesin family member 3C [Homo sapiens] 27 7.0
gi|169216998 PREDICTED: similar to hCG1811022 [Homo sapiens] 26 9.2
gi|239752285 PREDICTED: similar to hCG1811022 [Homo sapiens] 26 9.2
gi|239746796 PREDICTED: similar to hCG1811022 [Homo sapiens] 26 9.2
gi|4502107 annexin 5 [Homo sapiens] 26 9.2
gi|23503279 transmembrane protein 161B [Homo sapiens] 26 9.2
>gi|169178083 PREDICTED: similar to tumor protein,
translationally-controlled 1 [Homo sapiens]
Length = 138
Score = 282 bits (722), Expect = 5e-77
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD
Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
Query: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120
YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED
Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120
Query: 121 GVTPYMIFFRDGLETEKC 138
GVTPYMIFFRDGLETEKC
Sbjct: 121 GVTPYMIFFRDGLETEKC 138
>gi|169179309 PREDICTED: similar to tumor protein,
translationally-controlled 1 [Homo sapiens]
Length = 138
Score = 282 bits (722), Expect = 5e-77
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD
Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
Query: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120
YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED
Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120
Query: 121 GVTPYMIFFRDGLETEKC 138
GVTPYMIFFRDGLETEKC
Sbjct: 121 GVTPYMIFFRDGLETEKC 138
>gi|169181065 PREDICTED: similar to tumor protein,
translationally-controlled 1 [Homo sapiens]
Length = 138
Score = 280 bits (717), Expect = 2e-76
Identities = 137/138 (99%), Positives = 137/138 (99%)
Query: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD
Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
Query: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120
YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNY FFIGENMNPDGMVALLDYGED
Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYHFFIGENMNPDGMVALLDYGED 120
Query: 121 GVTPYMIFFRDGLETEKC 138
GVTPYMIFFRDGLETEKC
Sbjct: 121 GVTPYMIFFRDGLETEKC 138
>gi|4507669 tumor protein, translationally-controlled 1 [Homo
sapiens]
Length = 172
Score = 268 bits (684), Expect = 1e-72
Identities = 130/138 (94%), Positives = 133/138 (96%)
Query: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
MVSRTEGNIDDSLIGGN SAEGPEGEGTESTVIT VD+VMNHHLQETSFTKEA+KKYIKD
Sbjct: 35 MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKD 94
Query: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120
YMKSIKGKLEE RPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDY ED
Sbjct: 95 YMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYRED 154
Query: 121 GVTPYMIFFRDGLETEKC 138
GVTPYMIFF+DGLE EKC
Sbjct: 155 GVTPYMIFFKDGLEMEKC 172
>gi|46409468 hypothetical protein LOC392490 [Homo sapiens]
Length = 140
Score = 176 bits (447), Expect = 4e-45
Identities = 88/99 (88%), Positives = 92/99 (92%)
Query: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
+VSRTEGNI DSLIGGN SAEGPEG+GTESTVIT VD VMNHHLQETSFTKEA+ K IKD
Sbjct: 40 IVSRTEGNIFDSLIGGNASAEGPEGKGTESTVITGVDSVMNHHLQETSFTKEAYNKCIKD 99
Query: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQ 99
YMKSIKGKLEE RP+RVKPFMTGAAEQIKHILANFKNYQ
Sbjct: 100 YMKSIKGKLEEQRPKRVKPFMTGAAEQIKHILANFKNYQ 138
>gi|117414135 apoptosis inhibitor [Homo sapiens]
Length = 127
Score = 122 bits (306), Expect = 9e-29
Identities = 63/96 (65%), Positives = 73/96 (76%)
Query: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
M+S+T GN DDSLIG N S+E E E TEST+IT+VD+V NHHLQE+ FTKEA+KKYIKD
Sbjct: 23 MLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVTNHHLQESIFTKEAYKKYIKD 82
Query: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFK 96
YMKSI KLEE RPERVK F+TG + L FK
Sbjct: 83 YMKSINEKLEEQRPERVKLFITGMKNKSSTSLLIFK 118
>gi|239752409 PREDICTED: similar to hCG1793821 [Homo sapiens]
Length = 131
Score = 109 bits (272), Expect = 8e-25
Identities = 68/134 (50%), Positives = 76/134 (56%), Gaps = 37/134 (27%)
Query: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
+VSRTE NID SLIG N S E PEGE T+STVIT VD VM++HLQETSFTKEA
Sbjct: 31 IVSRTEDNIDGSLIGRNASTEVPEGEETQSTVITGVD-VMHYHLQETSFTKEASHP---- 85
Query: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120
NFK YQFFIGEN N D +VALLDY ED
Sbjct: 86 --------------------------------CNFKIYQFFIGENKNLDSVVALLDYCED 113
Query: 121 GVTPYMIFFRDGLE 134
V +M+FF+D LE
Sbjct: 114 TVILHMLFFKDDLE 127
>gi|239757896 PREDICTED: similar to hCG1793821 [Homo sapiens]
Length = 131
Score = 108 bits (269), Expect = 2e-24
Identities = 68/134 (50%), Positives = 75/134 (55%), Gaps = 37/134 (27%)
Query: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
+VSRTE NID SLIG N S E PEGE T+STVIT VD VM++HLQETSFTKEA
Sbjct: 31 IVSRTEDNIDGSLIGRNASTEVPEGEETQSTVITGVD-VMHYHLQETSFTKEASHP---- 85
Query: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120
NFK YQFFIGEN N D +VALLDY ED
Sbjct: 86 --------------------------------CNFKIYQFFIGENKNLDSVVALLDYCED 113
Query: 121 GVTPYMIFFRDGLE 134
V +M+FF D LE
Sbjct: 114 TVILHMLFFXDDLE 127
>gi|239746926 PREDICTED: similar to hCG1793821 [Homo sapiens]
Length = 131
Score = 107 bits (267), Expect = 3e-24
Identities = 67/134 (50%), Positives = 75/134 (55%), Gaps = 37/134 (27%)
Query: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
+VSRTE N D SLIG N S E PEGE T+STVIT VD VM++HLQETSFTKEA
Sbjct: 31 IVSRTEDNTDGSLIGRNASTEVPEGEETQSTVITGVD-VMHYHLQETSFTKEASHP---- 85
Query: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120
NFK YQFFIGEN N D +VALLDY ED
Sbjct: 86 --------------------------------CNFKIYQFFIGENKNLDSVVALLDYCED 113
Query: 121 GVTPYMIFFRDGLE 134
V +M+FF+D LE
Sbjct: 114 TVILHMLFFKDDLE 127
>gi|17136143 olfactomedin related ER localized protein isoform 1
[Homo sapiens]
Length = 467
Score = 30.0 bits (66), Expect = 0.63
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 51 KEAHKKYIKDYMKSIKGKLEELRP 74
+E+HK+++ K+IK K++ELRP
Sbjct: 122 EESHKQHLARQFKAIKAKMDELRP 145
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 28.5 bits (62), Expect = 1.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 55 KKYIKDYMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNY 98
KK + + +K K+E +R + F +GA +Q+ ++ F NY
Sbjct: 780 KKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNY 823
>gi|4809279 annexin VII isoform 2 [Homo sapiens]
Length = 488
Score = 27.7 bits (60), Expect = 3.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 11 DSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHK-KYIKDYMKSIK--- 66
D++ + + +G GT+ I VDVV N + K A K Y KD +K +K
Sbjct: 186 DAIRDAEILRKAMKGFGTDEQAI--VDVVANRSNDQRQKIKAAFKTSYGKDLIKDLKSEL 243
Query: 67 -GKLEEL 72
G +EEL
Sbjct: 244 SGNMEEL 250
>gi|4502111 annexin VII isoform 1 [Homo sapiens]
Length = 466
Score = 27.7 bits (60), Expect = 3.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 11 DSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHK-KYIKDYMKSIK--- 66
D++ + + +G GT+ I VDVV N + K A K Y KD +K +K
Sbjct: 164 DAIRDAEILRKAMKGFGTDEQAI--VDVVANRSNDQRQKIKAAFKTSYGKDLIKDLKSEL 221
Query: 67 -GKLEEL 72
G +EEL
Sbjct: 222 SGNMEEL 228
>gi|45597177 TBC1 domain family, member 9B (with GRAM domain) isoform
b [Homo sapiens]
Length = 1233
Score = 27.3 bits (59), Expect = 4.1
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 16 GNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKDYMKSIKGKLEELRPE 75
G+ S E E +GT S H+L+ + KEA K+ IKD K + + EL
Sbjct: 964 GSGSEERGEEKGTSSPDY-------RHYLRMWAKEKEAQKETIKDLPKMNQEQFIELCKT 1016
Query: 76 RVKPFMTGAAEQ-IKHILANFKNYQFFIGE 104
F EQ + H +A + IGE
Sbjct: 1017 LYNMFSEDPMEQDLYHAIATVASLLLRIGE 1046
>gi|45597175 TBC1 domain family, member 9B (with GRAM domain) isoform
a [Homo sapiens]
Length = 1250
Score = 27.3 bits (59), Expect = 4.1
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 16 GNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKDYMKSIKGKLEELRPE 75
G+ S E E +GT S H+L+ + KEA K+ IKD K + + EL
Sbjct: 981 GSGSEERGEEKGTSSPDY-------RHYLRMWAKEKEAQKETIKDLPKMNQEQFIELCKT 1033
Query: 76 RVKPFMTGAAEQ-IKHILANFKNYQFFIGE 104
F EQ + H +A + IGE
Sbjct: 1034 LYNMFSEDPMEQDLYHAIATVASLLLRIGE 1063
>gi|105990532 apolipoprotein B precursor [Homo sapiens]
Length = 4563
Score = 26.9 bits (58), Expect = 5.4
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 23 PEGEGTESTV---ITAVDVVMNHHLQETSFTKEAHKKYIKDYMKSIKGKLEELRPERVKP 79
P+G+G E TA +++ + + A KK I DY + + KL++ +
Sbjct: 4458 PDGKGKEKIAELSATAQEIIKSQAI--------ATKKIISDYHQQFRYKLQDFSDQLSDY 4509
Query: 80 FMTGAAEQIKHILANFKNYQFFI 102
+ AE + I + +NY F+
Sbjct: 4510 YEKFIAESKRLIDLSIQNYHTFL 4532
>gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens]
Length = 4967
Score = 26.6 bits (57), Expect = 7.0
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 65 IKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGEDGVTP 124
+K LE ++ ++ F+ AAE ++ + N K QF N P G+ +++Y + P
Sbjct: 3046 MKTGLESVK-SALRAFLDNAAEDLEKTMENLKQGQFTHTRN-QPKGVTQIINYTTVALLP 3103
Query: 125 YM 126
+
Sbjct: 3104 ML 3105
>gi|41352705 kinesin family member 3C [Homo sapiens]
Length = 793
Score = 26.6 bits (57), Expect = 7.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 23 PEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKDYMKSIKGKLEE 71
PEG E+ V D N+H + A +K +++Y++ K +LEE
Sbjct: 422 PEGPVIEAWVAEEEDDNNNNHRPPQPILESALEKNMENYLQEQKERLEE 470
>gi|169216998 PREDICTED: similar to hCG1811022 [Homo sapiens]
Length = 334
Score = 26.2 bits (56), Expect = 9.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 19 SAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKK 56
S G EG+ TE T +T V++HH + A +K
Sbjct: 11 SPSGNEGDVTELTCLTVYYPVLSHHASGSKSKLRAREK 48
>gi|239752285 PREDICTED: similar to hCG1811022 [Homo sapiens]
Length = 334
Score = 26.2 bits (56), Expect = 9.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 19 SAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKK 56
S G EG+ TE T +T V++HH + A +K
Sbjct: 11 SPSGNEGDVTELTCLTVYYPVLSHHASGSKSKLRAREK 48
>gi|239746796 PREDICTED: similar to hCG1811022 [Homo sapiens]
Length = 334
Score = 26.2 bits (56), Expect = 9.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 19 SAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKK 56
S G EG+ TE T +T V++HH + A +K
Sbjct: 11 SPSGNEGDVTELTCLTVYYPVLSHHASGSKSKLRAREK 48
>gi|4502107 annexin 5 [Homo sapiens]
Length = 320
Score = 26.2 bits (56), Expect = 9.2
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 24 EGEGT-ESTVITAVDVVMNHHLQETS--FTKEAHKKYIKDYMKSIKGKLEELRPERVKPF 80
+G GT E +++T + N QE S F + + D + GK E+L +KP
Sbjct: 29 KGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEKLIVALMKPS 88
Query: 81 MTGAAEQIKHIL 92
A ++KH L
Sbjct: 89 RLYDAYELKHAL 100
>gi|23503279 transmembrane protein 161B [Homo sapiens]
Length = 487
Score = 26.2 bits (56), Expect = 9.2
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 9 IDDSLIGGNVSAEGPEGEGTESTVITAVDVVMN 41
+D+SL+ +V +E P EG +T + V ++
Sbjct: 412 VDNSLLSNSVYSELPSAEGKMKVTVTQITVALS 444
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,961,468
Number of Sequences: 37866
Number of extensions: 191187
Number of successful extensions: 517
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 494
Number of HSP's gapped (non-prelim): 27
length of query: 138
length of database: 18,247,518
effective HSP length: 91
effective length of query: 47
effective length of database: 14,801,712
effective search space: 695680464
effective search space used: 695680464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.