Guide to the Human Genome
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Name: LOC653052 Sequence: fasta or formatted (264aa) NCBI GI: 169171552
Description:

PREDICTED: similar to homeodomain interacting protein kinase 3

Referenced in:

Homeobox and Related Proteins

Other entries for this name:
alt prot [460aa] PREDICTED: similar to homeodomain interacting protein kinase 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         13           1
 C cysteine            1.5          4           1
 D aspartate           1.9          5           2
 E glutamate           5.3         14           2
 F phenylalanine       2.3          6           1
 G glycine             6.1         16           2
 H histidine           3.0          8           1
 I isoleucine          4.9         13           2
 K lysine              4.9         13           2
 L leucine             6.4         17           2
 M methionine          1.9          5           1
 N asparagine          4.9         13           2
 P proline             4.9         13           2
 Q glutamine           5.7         15           1
 R arginine            3.0          8           2
 S serine             14.4         38           2
 T threonine           9.5         25           3
 V valine              8.0         21           2
 W tryptophan          0.8          2           1
 X unknown             2.7          7           7
 Y tyrosine            3.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to homeodomain interacting prote... 
HIPK2                 0.986   homeodomain interacting protein kinase 2 isoform 2 ...
HIPK2                 0.986   homeodomain interacting protein kinase 2 isoform 1 ...
LOC653052             0.986   PREDICTED: similar to homeodomain interacting prote...
HIPK1                 0.554   homeodomain-interacting protein kinase 1 isoform 1 [...
HIPK1                 0.554   homeodomain-interacting protein kinase 1 isoform 2 [...
HIPK3                 0.419   homeodomain interacting protein kinase 3 isoform 2 ...
HIPK3                 0.419   homeodomain interacting protein kinase 3 isoform 1 ...
DYRK4                 0.076   dual-specificity tyrosine-(Y)-phosphorylation regula...
HIPK4                 0.064   homeodomain interacting protein kinase 4 
DYRK1B                0.062   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1B                0.062   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1B                0.062   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK2                 0.062   dual-specificity tyrosine-(Y)-phosphorylation regul...
DYRK2                 0.062   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1A                0.058   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.058   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.058   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.058   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.058   dual-specificity tyrosine-(Y)-phosphorylation regula...
CLK2                  0.052   CDC-like kinase 2 
DYRK3                 0.045   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK3                 0.045   dual-specificity tyrosine-(Y)-phosphorylation regula...
CLK3                  0.041   CDC-like kinase 3 isoform a 
CLK3                  0.041   CDC-like kinase 3 isoform b 
CLK4                  0.039   CDC-like kinase 4 
CLK1                  0.037   CDC-like kinase 1 isoform 2 
CLK1                  0.037   CDC-like kinase 1 isoform 1 
CDK7                  0.035   cyclin-dependent kinase 7 
DCLK1                 0.033   doublecortin-like kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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