Guide to the Human Genome
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Search of human proteins with 169165489

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169165489 PREDICTED: similar to vomeronasal 1 receptor, A5
[Homo sapiens]
         (165 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169165489 PREDICTED: similar to vomeronasal 1 receptor, A5 [H...   331   2e-91
gi|239756558 PREDICTED: similar to vomeronasal 1 receptor, C3 [H...   115   2e-26
gi|169210430 PREDICTED: similar to vomeronasal 1 receptor, C3 [H...   115   2e-26
gi|239745522 PREDICTED: similar to vomeronasal 1 receptor, C3 [H...   115   2e-26
gi|27777675 vomeronasal 1 receptor 5 [Homo sapiens]                   112   1e-25
gi|169210247 PREDICTED: similar to hCG2041551 [Homo sapiens]           92   2e-19
gi|169210132 PREDICTED: similar to hCG2041551 [Homo sapiens]           92   2e-19
gi|155029529 vomeronasal 1 receptor 2 [Homo sapiens]                   59   2e-09
gi|71361647 vomeronasal 1 receptor 4 [Homo sapiens]                    54   8e-08
gi|10190668 vomeronasal 1 receptor 1 [Homo sapiens]                    52   2e-07
gi|229093087 G protein-coupled receptor 97 [Homo sapiens]              28   3.6  
gi|12965176 taste receptor, type 2, member 7 [Homo sapiens]            27   6.2  
gi|52426789 oxoglutarate (alpha-ketoglutarate) receptor 1 [Homo ...    27   8.0  

>gi|169165489 PREDICTED: similar to vomeronasal 1 receptor, A5 [Homo
           sapiens]
          Length = 165

 Score =  331 bits (848), Expect = 2e-91
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 1   MTLDLRHSLCAYFPHKMNKNNKPSSFIAIRNAAFSEVGIGISANAMLLLFHILTCLLKHR 60
           MTLDLRHSLCAYFPHKMNKNNKPSSFIAIRNAAFSEVGIGISANAMLLLFHILTCLLKHR
Sbjct: 1   MTLDLRHSLCAYFPHKMNKNNKPSSFIAIRNAAFSEVGIGISANAMLLLFHILTCLLKHR 60

Query: 61  TKPADLIVCHVALIHIILLLPTEFIATDIFGSQDSEDDIKHKSVIYRYRLMRGLSISTTC 120
           TKPADLIVCHVALIHIILLLPTEFIATDIFGSQDSEDDIKHKSVIYRYRLMRGLSISTTC
Sbjct: 61  TKPADLIVCHVALIHIILLLPTEFIATDIFGSQDSEDDIKHKSVIYRYRLMRGLSISTTC 120

Query: 121 LLSILPAITCSPRSSCLAVFKDSHITNHVAFSSYGSSTYPLVTAS 165
           LLSILPAITCSPRSSCLAVFKDSHITNHVAFSSYGSSTYPLVTAS
Sbjct: 121 LLSILPAITCSPRSSCLAVFKDSHITNHVAFSSYGSSTYPLVTAS 165


>gi|239756558 PREDICTED: similar to vomeronasal 1 receptor, C3 [Homo
           sapiens]
          Length = 275

 Score =  115 bits (288), Expect = 2e-26
 Identities = 63/127 (49%), Positives = 83/127 (65%), Gaps = 2/127 (1%)

Query: 24  SSFIAIRNAAFSEVGIGISANAMLLLFHILTCLLKHRTKPADLIVCHVALIHI-ILLLPT 82
           S++  ++NA   + GIG SAN  LL FHI T LL  R KP DL+ CH+ALIHI +LL   
Sbjct: 5   STYAIVKNAFVFQAGIGFSANTFLLFFHIFTLLLNRRPKPRDLLTCHLALIHIQMLLTAV 64

Query: 83  EFIATDIFGSQDSEDDIKHKSVIYRYRLMRGLSISTTCLLSILPAITCSPRSSCLAVFKD 142
           +F+  DIF S    +D K K++ Y  R M+GLSI TTCLL++L AI+ SP +S LA FK 
Sbjct: 65  DFLPLDIFESLHFGNDFKCKALFYTNRAMKGLSICTTCLLNMLQAISISPSTSWLARFKH 124

Query: 143 SHITNHV 149
              TN++
Sbjct: 125 KS-TNYI 130


>gi|169210430 PREDICTED: similar to vomeronasal 1 receptor, C3 [Homo
           sapiens]
          Length = 275

 Score =  115 bits (288), Expect = 2e-26
 Identities = 63/127 (49%), Positives = 83/127 (65%), Gaps = 2/127 (1%)

Query: 24  SSFIAIRNAAFSEVGIGISANAMLLLFHILTCLLKHRTKPADLIVCHVALIHI-ILLLPT 82
           S++  ++NA   + GIG SAN  LL FHI T LL  R KP DL+ CH+ALIHI +LL   
Sbjct: 5   STYAIVKNAFVFQAGIGFSANTFLLFFHIFTLLLNRRPKPRDLLTCHLALIHIQMLLTAV 64

Query: 83  EFIATDIFGSQDSEDDIKHKSVIYRYRLMRGLSISTTCLLSILPAITCSPRSSCLAVFKD 142
           +F+  DIF S    +D K K++ Y  R M+GLSI TTCLL++L AI+ SP +S LA FK 
Sbjct: 65  DFLPLDIFESLHFGNDFKCKALFYTNRAMKGLSICTTCLLNMLQAISISPSTSWLARFKH 124

Query: 143 SHITNHV 149
              TN++
Sbjct: 125 KS-TNYI 130


>gi|239745522 PREDICTED: similar to vomeronasal 1 receptor, C3 [Homo
           sapiens]
          Length = 275

 Score =  115 bits (288), Expect = 2e-26
 Identities = 63/127 (49%), Positives = 83/127 (65%), Gaps = 2/127 (1%)

Query: 24  SSFIAIRNAAFSEVGIGISANAMLLLFHILTCLLKHRTKPADLIVCHVALIHI-ILLLPT 82
           S++  ++NA   + GIG SAN  LL FHI T LL  R KP DL+ CH+ALIHI +LL   
Sbjct: 5   STYAIVKNAFVFQAGIGFSANTFLLFFHIFTLLLNRRPKPRDLLTCHLALIHIQMLLTAV 64

Query: 83  EFIATDIFGSQDSEDDIKHKSVIYRYRLMRGLSISTTCLLSILPAITCSPRSSCLAVFKD 142
           +F+  DIF S    +D K K++ Y  R M+GLSI TTCLL++L AI+ SP +S LA FK 
Sbjct: 65  DFLPLDIFESLHFGNDFKCKALFYTNRAMKGLSICTTCLLNMLQAISISPSTSWLARFKH 124

Query: 143 SHITNHV 149
              TN++
Sbjct: 125 KS-TNYI 130


>gi|27777675 vomeronasal 1 receptor 5 [Homo sapiens]
          Length = 357

 Score =  112 bits (281), Expect = 1e-25
 Identities = 66/148 (44%), Positives = 91/148 (61%), Gaps = 8/148 (5%)

Query: 9   LCAYFPHKMNKNNKPSSFIAIRNAAFSEVGIGISANAMLLLFHILTCLLKHRTKPADLIV 68
           LC  FP KM K      FI I+   + +   GISAN +LLLFHI T +  HR+K  D+I+
Sbjct: 28  LCFNFPSKMIKL---PGFITIQIFFYPQASFGISANTILLLFHIFTFVFSHRSKSIDMII 84

Query: 69  CHVALIHIILLLPTE-FIATDIFGSQDSEDDIKHKSVIYRYRLMRGLSISTTCLLSILPA 127
            H++LIHI+LL      ++ D FGSQ+++DD+++K +++  ++MRGLSI T CLLS+L A
Sbjct: 85  SHLSLIHILLLFTQAILVSLDFFGSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQA 144

Query: 128 ITCSPRSSCLAVFKD---SHITNHVAFS 152
           I  SP    LA  K    SHI     FS
Sbjct: 145 I-ISPSIFSLAKLKHPSASHILGFFLFS 171


>gi|169210247 PREDICTED: similar to hCG2041551 [Homo sapiens]
          Length = 289

 Score = 92.0 bits (227), Expect = 2e-19
 Identities = 51/111 (45%), Positives = 69/111 (62%), Gaps = 1/111 (0%)

Query: 32  AAFSEVGIGISANAMLLLFHILTCLLKHRTKPADLIVCHVALIHIILLLPTEFIAT-DIF 90
           A   + GIG+ AN  LL F I + L  HR KP D I CH+AL+H+ +LL   F+A+ D+F
Sbjct: 133 ALLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPDLF 192

Query: 91  GSQDSEDDIKHKSVIYRYRLMRGLSISTTCLLSILPAITCSPRSSCLAVFK 141
            S   ++D K K+    +R+MR LSI TTCLLS+L A+  SP +S  A  K
Sbjct: 193 ESLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIK 243


>gi|169210132 PREDICTED: similar to hCG2041551 [Homo sapiens]
          Length = 222

 Score = 92.0 bits (227), Expect = 2e-19
 Identities = 51/111 (45%), Positives = 69/111 (62%), Gaps = 1/111 (0%)

Query: 32  AAFSEVGIGISANAMLLLFHILTCLLKHRTKPADLIVCHVALIHIILLLPTEFIAT-DIF 90
           A   + GIG+ AN  LL F I + L  HR KP D I CH+AL+H+ +LL   F+A+ D+F
Sbjct: 66  ALLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPDLF 125

Query: 91  GSQDSEDDIKHKSVIYRYRLMRGLSISTTCLLSILPAITCSPRSSCLAVFK 141
            S   ++D K K+    +R+MR LSI TTCLLS+L A+  SP +S  A  K
Sbjct: 126 ESLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIK 176


>gi|155029529 vomeronasal 1 receptor 2 [Homo sapiens]
          Length = 395

 Score = 58.5 bits (140), Expect = 2e-09
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 6/144 (4%)

Query: 3   LDLRHSLC--AYFPHKMNK--NNKPSSFIAIRNAAFSEVGIGISANAMLLLFHILTCLLK 58
           L    SLC  + F H +      KP+  + +    F +V +GI  N  LL +++      
Sbjct: 60  LSFLSSLCLVSLFLHSLVSAHGEKPTKPVGLDPTLF-QVVVGILGNFSLLYYYMFLYFRG 118

Query: 59  HRTKPADLIVCHVALIHIILLLPTEFIAT-DIFGSQDSEDDIKHKSVIYRYRLMRGLSIS 117
           ++ +  DLI+ H+ +   +++L      T   FG +  ++    K ++Y +R+ RG+SI 
Sbjct: 119 YKPRSTDLILRHLTVADSLVILSKRIPETMATFGLKHFDNYFGCKFLLYAHRVGRGVSIG 178

Query: 118 TTCLLSILPAITCSPRSSCLAVFK 141
           +TCLLS+   IT +PR+S  A  K
Sbjct: 179 STCLLSVFQVITINPRNSRWAEMK 202


>gi|71361647 vomeronasal 1 receptor 4 [Homo sapiens]
          Length = 301

 Score = 53.5 bits (127), Expect = 8e-08
 Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 9/133 (6%)

Query: 24  SSFIAIRNAAFSEVGIGISANAMLLLFHILTCLLKHRTKPADLIVCHVALIHIILL---- 79
           S ++A+     S+  +G+  +  +LL ++       R +  DLIV H+ + + + L    
Sbjct: 3   SRYVAV-GMILSQTVVGVLGSFSVLLHYLSFYCTGCRLRSTDLIVKHLIVANFLALRCKG 61

Query: 80  LPTEFIATDIFGSQDSEDDIKHKSVIYRYRLMRGLSISTTCLLSILPAITCSPRSSCLAV 139
           +P    A   FG +   + +  K V Y +R+ RG+SI TTCLLS+   IT S R S  A 
Sbjct: 62  VPQTMAA---FGVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSVFQVITVSSRKSRWAK 118

Query: 140 FKDSHITNHVAFS 152
            K+     HV FS
Sbjct: 119 LKEK-APKHVGFS 130


>gi|10190668 vomeronasal 1 receptor 1 [Homo sapiens]
          Length = 353

 Score = 52.0 bits (123), Expect = 2e-07
 Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 7/101 (6%)

Query: 36  EVGIGISANAMLLLFHILTCLLKHRTKPADLIVCHVALIHIILL----LPTEFIATDIFG 91
           + G+GI  N+ LL F+ L     H+ +P DLI+  +AL + ++L    +P    A   FG
Sbjct: 55  QTGVGILGNSFLLCFYNLILFTGHKLRPTDLILSQLALANSMVLFFKGIPQTMAA---FG 111

Query: 92  SQDSEDDIKHKSVIYRYRLMRGLSISTTCLLSILPAITCSP 132
            +   +D   K V Y +R+   +S+ST CLL+   AI  +P
Sbjct: 112 LKYLLNDTGCKFVFYYHRVGTRVSLSTICLLNGFQAIKLNP 152


>gi|229093087 G protein-coupled receptor 97 [Homo sapiens]
          Length = 549

 Score = 28.1 bits (61), Expect = 3.6
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 35  SEVGIGISAN--AMLLLFHILTCLLKHRTKPADLIVCHVALIHIILLLPTEFIATDIFGS 92
           S+ G G+S    A  ++ +    L + R K  D    HVAL   + LL   F+     GS
Sbjct: 272 SQAGCGVSMIFLAFTIILYAFLRLSRERFKSEDAPKIHVALGGSLFLLNLAFLVNVGSGS 331

Query: 93  QDSEDDIKHKSVIYRYRLM 111
           + S+     +  ++ Y L+
Sbjct: 332 KGSDAACWARGAVFHYFLL 350


>gi|12965176 taste receptor, type 2, member 7 [Homo sapiens]
          Length = 318

 Score = 27.3 bits (59), Expect = 6.2
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 33 AFSEVGIGISANAMLLLFHILTCLLKHRTKPADLIVCHVALIHIILL 79
          A  E  +GI  NA + L + +  + K +    DLI+  +A+  I LL
Sbjct: 13 AVGEFSVGILGNAFIGLVNCMDWVKKRKIASIDLILTSLAISRICLL 59


>gi|52426789 oxoglutarate (alpha-ketoglutarate) receptor 1 [Homo
           sapiens]
          Length = 337

 Score = 26.9 bits (58), Expect = 8.0
 Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 12/102 (11%)

Query: 48  LLFHILTCLLKHRTKPADLIVCHVALIHIILLLPTEFIATDI----------FGSQDSED 97
           ++ H ++C   H+T+ A +    V +I ++ ++P  F+ T              S D  +
Sbjct: 134 VIIHPMSCFSIHKTRCAVVACAVVWIISLVAVIPMTFLITSTNRTNRSACLDLTSSDELN 193

Query: 98  DIK-HKSVIYRYRLMRGLSISTTCLLSILPAITCSPRS-SCL 137
            IK +  ++        L I T C  +I+  +T   ++ SCL
Sbjct: 194 TIKWYNLILTATTFCLPLVIVTLCYTTIIHTLTHGLQTDSCL 235


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.137    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,997,106
Number of Sequences: 37866
Number of extensions: 221862
Number of successful extensions: 517
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 497
Number of HSP's gapped (non-prelim): 13
length of query: 165
length of database: 18,247,518
effective HSP length: 94
effective length of query: 71
effective length of database: 14,688,114
effective search space: 1042856094
effective search space used: 1042856094
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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