Search of human proteins with 167001141

Search of human proteins with 167001141

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|167001141 glypican 1 precursor [Homo sapiens]
         (558 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|167001141 glypican 1 precursor [Homo sapiens]                     1134   0.0  
gi|5031719 glypican 6 precursor [Homo sapiens]                        515   e-146
gi|21614525 glypican 4 [Homo sapiens]                                 471   e-133
gi|22749459 glypican 2 [Homo sapiens]                                 385   e-107
gi|4758464 glypican 5 [Homo sapiens]                                  184   2e-46
gi|4758462 glypican 3 [Homo sapiens]                                  168   1e-41
gi|41322923 plectin 1 isoform 11 [Homo sapiens]                        34   0.31 
gi|41322914 plectin 1 isoform 10 [Homo sapiens]                        34   0.31 
gi|41322919 plectin 1 isoform 8 [Homo sapiens]                         34   0.31 
gi|41322910 plectin 1 isoform 7 [Homo sapiens]                         34   0.31 
gi|41322916 plectin 1 isoform 6 [Homo sapiens]                         34   0.31 
gi|41322908 plectin 1 isoform 3 [Homo sapiens]                         34   0.31 
gi|41322912 plectin 1 isoform 2 [Homo sapiens]                         34   0.31 
gi|47607492 plectin 1 isoform 1 [Homo sapiens]                         34   0.31 
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo...    33   0.69 
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo...    33   0.69 
gi|169162091 PREDICTED: similar to Kinesin-Like Protein family m...    32   2.0  
gi|239741525 PREDICTED: hypothetical protein [Homo sapiens]            32   2.0  
gi|117956391 protease, serine, 33 [Homo sapiens]                       32   2.0  
gi|239753091 PREDICTED: hypothetical protein [Homo sapiens]            31   3.4  
gi|4504151 granulin precursor [Homo sapiens]                           30   4.5  
gi|239757333 PREDICTED: hypothetical protein [Homo sapiens]            30   4.5  
gi|239751837 PREDICTED: hypothetical protein [Homo sapiens]            30   4.5  
gi|239746328 PREDICTED: hypothetical protein XP_002343731 [Homo ...    30   4.5  
gi|178557734 microtubule-associated protein tau isoform 6 [Homo ...    30   5.8  
gi|82534351 microtubule-associated protein tau isoform 1 [Homo s...    30   5.8  
gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ...    30   5.8  
gi|34577055 F-box only protein 30 [Homo sapiens]                       30   5.8  
gi|55742857 ankyrin repeat domain 6 [Homo sapiens]                     30   5.8  
gi|11545875 GDNF family receptor alpha 4 isoform a precursor [Ho...    30   5.8  

>gi|167001141 glypican 1 precursor [Homo sapiens]
          Length = 558

 Score = 1134 bits (2932), Expect = 0.0
 Identities = 558/558 (100%), Positives = 558/558 (100%)

Query: 1   MELRARGWWLLCAAAALVACARGDPASKSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLR 60
           MELRARGWWLLCAAAALVACARGDPASKSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLR
Sbjct: 1   MELRARGWWLLCAAAALVACARGDPASKSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLR 60

Query: 61  ICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSER 120
           ICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSER
Sbjct: 61  ICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSER 120

Query: 121 TLQATFPGAFGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHP 180
           TLQATFPGAFGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHP
Sbjct: 121 TLQATFPGAFGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHP 180

Query: 181 QLLLPDDYLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV 240
           QLLLPDDYLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV
Sbjct: 181 QLLLPDDYLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV 240

Query: 241 PLGPECSRAVMKLVYCAHCLGVPGARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLI 300
           PLGPECSRAVMKLVYCAHCLGVPGARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLI
Sbjct: 241 PLGPECSRAVMKLVYCAHCLGVPGARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLI 300

Query: 301 TDKFWGTSGVESVIGSVHTWLAEAINALQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKRR 360
           TDKFWGTSGVESVIGSVHTWLAEAINALQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKRR
Sbjct: 301 TDKFWGTSGVESVIGSVHTWLAEAINALQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKRR 360

Query: 361 RGKLAPRERPPSGTLEKLVSEAKAQLRDVQDFWISLPGTLCSEKMALSTASDDRCWNGMA 420
           RGKLAPRERPPSGTLEKLVSEAKAQLRDVQDFWISLPGTLCSEKMALSTASDDRCWNGMA
Sbjct: 361 RGKLAPRERPPSGTLEKLVSEAKAQLRDVQDFWISLPGTLCSEKMALSTASDDRCWNGMA 420

Query: 421 RGRYLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQD 480
           RGRYLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQD
Sbjct: 421 RGRYLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQD 480

Query: 481 ASDDGSGSGSGDGCLDDLCSRKVSRKSSSSRTPLTHALPGLSEQEGQKTSAASCPQPPTF 540
           ASDDGSGSGSGDGCLDDLCSRKVSRKSSSSRTPLTHALPGLSEQEGQKTSAASCPQPPTF
Sbjct: 481 ASDDGSGSGSGDGCLDDLCSRKVSRKSSSSRTPLTHALPGLSEQEGQKTSAASCPQPPTF 540

Query: 541 LLPLLLFLALTVARPRWR 558
           LLPLLLFLALTVARPRWR
Sbjct: 541 LLPLLLFLALTVARPRWR 558


>gi|5031719 glypican 6 precursor [Homo sapiens]
          Length = 555

 Score =  515 bits (1326), Expect = e-146
 Identities = 241/481 (50%), Positives = 345/481 (71%), Gaps = 9/481 (1%)

Query: 28  KSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLRICPQGYTCCTSEMEENLANRSHAELET 87
           K+RSCGEVRQ YGAKGFSL+D+P  EI+GEHLRICPQ YTCCT+EME+ L+ +S  E E 
Sbjct: 26  KARSCGEVRQAYGAKGFSLADIPYQEIAGEHLRICPQEYTCCTTEMEDKLSQQSKLEFEN 85

Query: 88  ALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYSE 147
            + ++S  ++    ++ + FD+ F+ LL ++E++L   F   +G LY QN+  F+DL++E
Sbjct: 86  LVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSLNDMFVRTYGMLYMQNSEVFQDLFTE 145

Query: 148 LRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYLDCLGKQAEALRPFGEAPR 207
           L+ YY G N++LEE L +FWARLLER+F+ ++PQ    +DYL+C+ K  + L+PFG+ PR
Sbjct: 146 LKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQYHFSEDYLECVSKYTDQLKPFGDVPR 205

Query: 208 ELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRAVMKLVYCAHCLGVPGARP 267
           +L+++ TRAF+AAR+FVQGL V  +V  +V++V   P C RA+MK++YC +C G+P  RP
Sbjct: 206 KLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSPTPGCIRALMKMLYCPYCRGLPTVRP 265

Query: 268 CPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGTSGVESVIGSVHTWLAEAINA 327
           C +YC NV+KGCLANQADLD EW   +D+M+L+ ++  G   +ESV+  +   ++EAI  
Sbjct: 266 CNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAERLEGPFNIESVMDPIDVKISEAIMN 325

Query: 328 LQDNRDTLTAKVIQGCGNPKVNP----QGPGPEEKRRRGK-LAPRERPPSG---TLEKLV 379
           +Q+N   ++AKV QGCG PK  P        PE    R +   P ERP +    +L++LV
Sbjct: 326 MQENSMQVSAKVFQGCGQPKPAPALRSARSAPENFNTRFRPYNPEERPTTAAGTSLDRLV 385

Query: 380 SEAKAQLRDVQDFWISLPGTLC-SEKMALSTASDDRCWNGMARGRYLPEVMGDGLANQIN 438
           ++ K +L+  +  W +LP T+C  E +   T++++ CWNG ++ RYLPE+M DGL NQIN
Sbjct: 386 TDIKEKLKLSKKVWSALPYTICKDESVTAGTSNEEECWNGHSKARYLPEIMNDGLTNQIN 445

Query: 439 NPEVEVDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQDASDDGSGSGSGDGCLDDL 498
           NPEV+VDIT+PD  IRQQIM L++MTN+L++AYNGNDV+FQD SD+ SGSGSG GC+DD+
Sbjct: 446 NPEVDVDITRPDTFIRQQIMALRVMTNKLKNAYNGNDVNFQDTSDESSGSGSGSGCMDDV 505

Query: 499 C 499
           C
Sbjct: 506 C 506


>gi|21614525 glypican 4 [Homo sapiens]
          Length = 556

 Score =  471 bits (1212), Expect = e-133
 Identities = 242/559 (43%), Positives = 355/559 (63%), Gaps = 21/559 (3%)

Query: 10  LLCAAAALVACARGDPASKSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLRICPQGYTCC 69
           LLC  A L A        KS+SC EVR++Y +KGF+ +D P  EI+G+HL+ICPQG TCC
Sbjct: 9   LLCTLAVLSAALLAAEL-KSKSCSEVRRLYVSKGFNKNDAPLHEINGDHLKICPQGSTCC 67

Query: 70  TSEMEENLANRSHAELETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGA 129
           + EMEE  + +S  + ++ + +    LQA+ A++ + FD+ F+ LL ++E++L   F   
Sbjct: 68  SQEMEEKYSLQSKDDFKSVVSEQCNHLQAVFASRYKKFDEFFKELLENAEKSLNDMFVKT 127

Query: 130 FGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYL 189
           +G LY QN+  F+DL+ EL+ YY   N++LEE L +FWARLLER+F+ ++ Q    D+YL
Sbjct: 128 YGHLYMQNSELFKDLFVELKRYYVVGNVNLEEMLNDFWARLLERMFRLVNSQYHFTDEYL 187

Query: 190 DCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRA 249
           +C+ K  E L+PFG+ PR+L+L+ TRAFVAAR+F QGL VA DVV KV+ V    +C+ A
Sbjct: 188 ECVSKYTEQLKPFGDVPRKLKLQVTRAFVAARTFAQGLAVAGDVVSKVSVVNPTAQCTHA 247

Query: 250 VMKLVYCAHCLGVPGARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGTSG 309
           ++K++YC+HC G+   +PC +YC N+++GCLANQ DLD EW N +D+M+++ ++  G   
Sbjct: 248 LLKMIYCSHCRGLVTVKPCYNYCSNIMRGCLANQGDLDFEWNNFIDAMLMVAERLEGPFN 307

Query: 310 VESVIGSVHTWLAEAINALQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKRRRGKLA---- 365
           +ESV+  +   +++AI  +QDN   ++ KV QGCG PK  P G            A    
Sbjct: 308 IESVMDPIDVKISDAIMNMQDNSVQVSQKVFQGCGPPKPLPAGRISRSISESAFSARFRP 367

Query: 366 --PRERPPSG---TLEKLVSEAKAQLRDVQDFWISLPGTLCS-EKMALSTASDDRCWNGM 419
             P ERP +    +L++LV++ K +L+  + FW SLP  +C+ E+MA    ++D CWNG 
Sbjct: 368 HHPEERPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPSNVCNDERMAAGNGNEDDCWNGK 427

Query: 420 ARGRYLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQ 479
            + RYL  V G+GLANQ NNPEV+VD +KPD+ I +QIM L++MT+++++AYNGNDVDF 
Sbjct: 428 GKSRYLFAVTGNGLANQGNNPEVQVDTSKPDILILRQIMALRVMTSKMKNAYNGNDVDFF 487

Query: 480 DASDDGSGSGSGDGCLDDLCSRKVSRKSSSSRTPLTHALPGLSEQEGQKTSAASCPQPPT 539
           D SD+ SG GSG GC    C  +    ++       HA  G S  E +  SA   P    
Sbjct: 488 DISDESSGEGSGSGCEYQQCPSEFDYNATD------HA--GKSANE-KADSAGVRPGAQA 538

Query: 540 FLLPLLLFLALTVARPRWR 558
           +LL +   L L + R  WR
Sbjct: 539 YLLTVFCILFLVMQR-EWR 556


>gi|22749459 glypican 2 [Homo sapiens]
          Length = 579

 Score =  385 bits (988), Expect = e-107
 Identities = 206/506 (40%), Positives = 302/506 (59%), Gaps = 16/506 (3%)

Query: 23  GDPASKSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLRICPQGYTCCTSEMEENLANRSH 82
           G  A  +RSC E RQ+ GA+G+SL+ +P A ISGEHLR+CPQ YTCC+SE E+ L   + 
Sbjct: 23  GSEAKVTRSCAETRQVLGARGYSLNLIPPALISGEHLRVCPQEYTCCSSETEQRLIRETE 82

Query: 83  AELETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFR 142
           A     + DS   L   LA + R FD+ F  +L+ ++ +L   F  ++G LY Q+A  F 
Sbjct: 83  ATFRGLVEDSGSFLVHTLAARHRKFDEFFLEMLSVAQHSLTQLFSHSYGRLYAQHALIFN 142

Query: 143 DLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYLDCLGKQAE----A 198
            L+S LR +Y  +   L++TLA+FWA+LLER+F  LHPQ   P DYL CL + A     +
Sbjct: 143 GLFSRLRDFYGESGEGLDDTLADFWAQLLERVFPLLHPQYSFPPDYLLCLSRLASSTDGS 202

Query: 199 LRPFGEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRAVMKLVYCAH 258
           L+PFG++PR LRL+ TR  VAAR+FVQGL    +VV +  +VP+   CS+A+M+L+ C  
Sbjct: 203 LQPFGDSPRRLRLQITRTLVAARAFVQGLETGRNVVSEALKVPVSEGCSQALMRLIGCPL 262

Query: 259 CLGVPGARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGTSGVESVIGSVH 318
           C GVP   PC  +C NV++GCL+++  L+ +W N LD ++++ DK  G    E    S+ 
Sbjct: 263 CRGVPSLMPCQGFCLNVVRGCLSSRG-LEPDWGNYLDGLLILADKLQGPFSFELTAESIG 321

Query: 319 TWLAEAINALQDNRDTLTAKVIQGCGNPKV----NPQGPGPEEKRRR--GKLAPRERPPS 372
             ++E +  LQ+N   ++A+V Q CG P      N + P P E+  R    +   ERP +
Sbjct: 322 VKISEGLMYLQENSAKVSAQVFQECGPPDPVPARNRRAPPPREEAGRLWSMVTEEERPTT 381

Query: 373 G---TLEKLVSEAKAQLRDVQDFWISLPGTLCSEKMALSTASDDR--CWNGMARGRYLPE 427
                L +LV E + +L  ++ FW  L  T+C +    + AS +   CW G  RGRYLP 
Sbjct: 382 AAGTNLHRLVWELRERLARMRGFWARLSLTVCGDSRMAADASLEAAPCWTGAGRGRYLPP 441

Query: 428 VMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQDASDDGSG 487
           V+G   A Q+NNPE++VD + PD+  R++ +QL+  T R+++A  G+D+D QDA +D SG
Sbjct: 442 VVGGSPAEQVNNPELKVDASGPDVPTRRRRLQLRAATARMKTAALGHDLDGQDADEDASG 501

Query: 488 SGSGDGCLDDLCSRKVSRKSSSSRTP 513
           SG G    DD  +  V+  +   R P
Sbjct: 502 SGGGQQYADDWMAGAVAPPARPPRPP 527


>gi|4758464 glypican 5 [Homo sapiens]
          Length = 572

 Score =  184 bits (467), Expect = 2e-46
 Identities = 136/501 (27%), Positives = 241/501 (48%), Gaps = 30/501 (5%)

Query: 16  ALVACARGDPASKSRSCGEVRQIYGAKGF-SLSDVPQAEISGEHLRIC-PQGYTCCTSEM 73
           ALV  AR +     ++C EVR+++  +   ++  +P +  +G  L++C  +  TCCT +M
Sbjct: 17  ALVGSARSEGV---QTCEEVRKLFQWRLLGAVRGLPDSPRAGPDLQVCISKKPTCCTRKM 73

Query: 74  EENLANRSHAELETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGEL 133
           EE     +  +++  L+ SS  L+ +++    +F +  + L+  +E      F   +  +
Sbjct: 74  EERYQIAARQDMQQFLQTSSSTLKFLISRNAAAFQETLETLIKQAENYTSILFCSTYRNM 133

Query: 134 YTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPD------D 187
             + A + ++ ++++ LY  GA+++ EE    F  R  + LF  ++  L+ P       +
Sbjct: 134 ALEAAASVQEFFTDVGLYLFGADVNPEE----FVNRFFDSLFPLVYNHLINPGVTDSSLE 189

Query: 188 YLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECS 247
           Y +C+      + PFG  P+ +  +  R+ + +R+F+Q L +  +V+     +    ECS
Sbjct: 190 YSECIRMARRDVSPFGNIPQRVMGQMGRSLLPSRTFLQALNLGIEVINTTDYLHFSKECS 249

Query: 248 RAVMKLVYCAHCLGVPGARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGT 307
           RA++K+ YC HC G+   +PC  YC NV++GCLA+ A+L+  W   + S+  ++D   GT
Sbjct: 250 RALLKMQYCPHCQGLALTKPCMGYCLNVMRGCLAHMAELNPHWHAYIRSLEELSDAMHGT 309

Query: 308 SGVESVIGSVHTWLAEAINALQDNRDTLTAKVIQGCGNPKVNP-QGP--GPEEKRRRGKL 364
             +  V+ + H  + +A+     N   L  +V + CG P   P Q P    ++ + +  +
Sbjct: 310 YDIGHVLLNFHLLVNDAVLQAHLNGQKLLEQVNRICGRPVRTPTQSPRCSFDQSKEKHGM 369

Query: 365 APRERPPSGTLEKLVSEAKAQLRDVQDFWISLPGTLCSEKMALSTASDDRCWNGMARGR- 423
               R    TL     E    LR  + F+  L   LC+ ++A   A    CWNG    + 
Sbjct: 370 KTTTRNSEETLANRRKEFINSLRLYRSFYGGLADQLCANELA--AADGLPCWNGEDIVKS 427

Query: 424 YLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQDASD 483
           Y   V+G+G+  Q  NPEV+V    P   I Q I +LK +   L+        D  +   
Sbjct: 428 YTQRVVGNGIKAQSGNPEVKVKGIDP--VINQIIDKLKHVVQLLQG--RSPKPDKWELLQ 483

Query: 484 DGSGSG-----SGDGCLDDLC 499
            GSG G     SGD   +D C
Sbjct: 484 LGSGGGMVEQVSGDCDDEDGC 504


>gi|4758462 glypican 3 [Homo sapiens]
          Length = 580

 Score =  168 bits (426), Expect = 1e-41
 Identities = 125/492 (25%), Positives = 232/492 (47%), Gaps = 29/492 (5%)

Query: 21  ARGDPASKSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLRIC-PQGYTCCTSEMEENLAN 79
           A+  P     +C +VR  +      L  VP+  + G  L++C P+G TCC+ +MEE    
Sbjct: 24  AQPPPPPPDATCHQVRSFFQRLQPGLKWVPETPVPGSDLQVCLPKGPTCCSRKMEEKYQL 83

Query: 80  RSHAELETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNAR 139
            +   +E  L+ +S  L+ ++      F + F+ ++  ++    A F   +  L  Q   
Sbjct: 84  TARLNMEQLLQSASMELKFLIIQNAAVFQEAFEIVVRHAKNYTNAMFKNNYPSLTPQAFE 143

Query: 140 AFRDLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLL---LPDDYLD---CLG 193
              + ++++ LY  G+++++++ + E    L + LF  ++ QL+   LPD  LD   CL 
Sbjct: 144 FVGEFFTDVSLYILGSDINVDDMVNE----LFDSLFPVIYTQLMNPGLPDSALDINECLR 199

Query: 194 KQAEALRPFGEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRAVMKL 253
                L+ FG  P+ +  + +++    R F+Q L +  +V+     +    +C R + ++
Sbjct: 200 GARRDLKVFGNFPKLIMTQVSKSLQVTRIFLQALNLGIEVINTTDHLKFSKDCGRMLTRM 259

Query: 254 VYCAHCLGVPGARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGTSGVESV 313
            YC++C G+   +PC  YC  V++GC+A   ++D  WR  + S+  + +  +    +E+V
Sbjct: 260 WYCSYCQGLMMVKPCGGYCNVVMQGCMAGVVEIDKYWREYILSLEELVNGMYRIYDMENV 319

Query: 314 IGSVHTWLAEAINALQDNRDTLTAKVIQGCGNPKVNPQGPG--PEE---KRRRGKLAPRE 368
           +  + + + ++I  +Q N   LT  + + C + +         PE+    ++  K+A  E
Sbjct: 320 LLGLFSTIHDSIQYVQKNAGKLTTTIGKLCAHSQQRQYRSAYYPEDLFIDKKVLKVAHVE 379

Query: 369 RPPSGTLEKLVSEAKAQLRDVQDFWISLPGTLCSEKMALSTASDDRCWNGMAR-GRYLPE 427
                TL     E   +L+    F+ +LPG +CS        +D  CWNG     RY  +
Sbjct: 380 H--EETLSSRRRELIQKLKSFISFYSALPGYICSHSPV--AENDTLCWNGQELVERYSQK 435

Query: 428 VMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLR--SAYNGNDVDFQDASDDG 485
              +G+ NQ N  E++  +  P+  + Q I +LK +   LR  S   G  +   D + D 
Sbjct: 436 AARNGMKNQFNLHELK--MKGPEPVVSQIIDKLKHINQLLRTMSMPKGRVL---DKNLDE 490

Query: 486 SGSGSGDGCLDD 497
            G  SGD C DD
Sbjct: 491 EGFESGD-CGDD 501


>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
          Length = 4547

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 24/183 (13%)

Query: 51   QAEISGEHLRICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAMLATQLRSFDDH 110
            QA+   E LR   Q  +    + E  LA+R  AE E A R+  R LQA+   +L++    
Sbjct: 1491 QAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAA-REKQRALQALEELRLQA---- 1545

Query: 111  FQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARL 170
                  ++ER L+                  R +   L    R A   L+   A F  + 
Sbjct: 1546 -----EEAERRLRQA-----------EVERARQVQVALETAQRSAEAELQSKRASFAEKT 1589

Query: 171  --LERLFKQLHPQLL-LPDDYLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGL 227
              LER  ++ H  +  L ++      +QAEA R   EA REL     +A  A R  +Q  
Sbjct: 1590 AQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAE 1649

Query: 228  GVA 230
             VA
Sbjct: 1650 EVA 1652


>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
          Length = 4551

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 24/183 (13%)

Query: 51   QAEISGEHLRICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAMLATQLRSFDDH 110
            QA+   E LR   Q  +    + E  LA+R  AE E A R+  R LQA+   +L++    
Sbjct: 1495 QAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAA-REKQRALQALEELRLQA---- 1549

Query: 111  FQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARL 170
                  ++ER L+                  R +   L    R A   L+   A F  + 
Sbjct: 1550 -----EEAERRLRQA-----------EVERARQVQVALETAQRSAEAELQSKRASFAEKT 1593

Query: 171  --LERLFKQLHPQLL-LPDDYLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGL 227
              LER  ++ H  +  L ++      +QAEA R   EA REL     +A  A R  +Q  
Sbjct: 1594 AQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAE 1653

Query: 228  GVA 230
             VA
Sbjct: 1654 EVA 1656


>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
          Length = 4547

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 24/183 (13%)

Query: 51   QAEISGEHLRICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAMLATQLRSFDDH 110
            QA+   E LR   Q  +    + E  LA+R  AE E A R+  R LQA+   +L++    
Sbjct: 1491 QAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAA-REKQRALQALEELRLQA---- 1545

Query: 111  FQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARL 170
                  ++ER L+                  R +   L    R A   L+   A F  + 
Sbjct: 1546 -----EEAERRLRQA-----------EVERARQVQVALETAQRSAEAELQSKRASFAEKT 1589

Query: 171  --LERLFKQLHPQLL-LPDDYLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGL 227
              LER  ++ H  +  L ++      +QAEA R   EA REL     +A  A R  +Q  
Sbjct: 1590 AQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAE 1649

Query: 228  GVA 230
             VA
Sbjct: 1650 EVA 1652


>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
          Length = 4515

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 24/183 (13%)

Query: 51   QAEISGEHLRICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAMLATQLRSFDDH 110
            QA+   E LR   Q  +    + E  LA+R  AE E A R+  R LQA+   +L++    
Sbjct: 1459 QAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAA-REKQRALQALEELRLQA---- 1513

Query: 111  FQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARL 170
                  ++ER L+                  R +   L    R A   L+   A F  + 
Sbjct: 1514 -----EEAERRLRQA-----------EVERARQVQVALETAQRSAEAELQSKRASFAEKT 1557

Query: 171  --LERLFKQLHPQLL-LPDDYLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGL 227
              LER  ++ H  +  L ++      +QAEA R   EA REL     +A  A R  +Q  
Sbjct: 1558 AQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAE 1617

Query: 228  GVA 230
             VA
Sbjct: 1618 EVA 1620


>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
          Length = 4684

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 24/183 (13%)

Query: 51   QAEISGEHLRICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAMLATQLRSFDDH 110
            QA+   E LR   Q  +    + E  LA+R  AE E A R+  R LQA+   +L++    
Sbjct: 1628 QAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAA-REKQRALQALEELRLQA---- 1682

Query: 111  FQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARL 170
                  ++ER L+                  R +   L    R A   L+   A F  + 
Sbjct: 1683 -----EEAERRLRQA-----------EVERARQVQVALETAQRSAEAELQSKRASFAEKT 1726

Query: 171  --LERLFKQLHPQLL-LPDDYLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGL 227
              LER  ++ H  +  L ++      +QAEA R   EA REL     +A  A R  +Q  
Sbjct: 1727 AQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAE 1786

Query: 228  GVA 230
             VA
Sbjct: 1787 EVA 1789


>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
          Length = 4525

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 24/183 (13%)

Query: 51   QAEISGEHLRICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAMLATQLRSFDDH 110
            QA+   E LR   Q  +    + E  LA+R  AE E A R+  R LQA+   +L++    
Sbjct: 1469 QAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAA-REKQRALQALEELRLQA---- 1523

Query: 111  FQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARL 170
                  ++ER L+                  R +   L    R A   L+   A F  + 
Sbjct: 1524 -----EEAERRLRQA-----------EVERARQVQVALETAQRSAEAELQSKRASFAEKT 1567

Query: 171  --LERLFKQLHPQLL-LPDDYLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGL 227
              LER  ++ H  +  L ++      +QAEA R   EA REL     +A  A R  +Q  
Sbjct: 1568 AQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAE 1627

Query: 228  GVA 230
             VA
Sbjct: 1628 EVA 1630


>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
          Length = 4533

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 24/183 (13%)

Query: 51   QAEISGEHLRICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAMLATQLRSFDDH 110
            QA+   E LR   Q  +    + E  LA+R  AE E A R+  R LQA+   +L++    
Sbjct: 1477 QAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAA-REKQRALQALEELRLQA---- 1531

Query: 111  FQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARL 170
                  ++ER L+                  R +   L    R A   L+   A F  + 
Sbjct: 1532 -----EEAERRLRQA-----------EVERARQVQVALETAQRSAEAELQSKRASFAEKT 1575

Query: 171  --LERLFKQLHPQLL-LPDDYLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGL 227
              LER  ++ H  +  L ++      +QAEA R   EA REL     +A  A R  +Q  
Sbjct: 1576 AQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAE 1635

Query: 228  GVA 230
             VA
Sbjct: 1636 EVA 1638


>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
          Length = 4574

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 24/183 (13%)

Query: 51   QAEISGEHLRICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAMLATQLRSFDDH 110
            QA+   E LR   Q  +    + E  LA+R  AE E A R+  R LQA+   +L++    
Sbjct: 1518 QAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAA-REKQRALQALEELRLQA---- 1572

Query: 111  FQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARL 170
                  ++ER L+                  R +   L    R A   L+   A F  + 
Sbjct: 1573 -----EEAERRLRQA-----------EVERARQVQVALETAQRSAEAELQSKRASFAEKT 1616

Query: 171  --LERLFKQLHPQLL-LPDDYLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGL 227
              LER  ++ H  +  L ++      +QAEA R   EA REL     +A  A R  +Q  
Sbjct: 1617 AQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAE 1676

Query: 228  GVA 230
             VA
Sbjct: 1677 EVA 1679


>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
           sapiens]
          Length = 1059

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 481 ASDDGSGSGSGDGCLD-DLCSRKVSRKSSSSRTPLTHALPGLSEQEGQKTSAASCPQPPT 539
           A+  G+G+G        DLC +  S   S  R    HA P  +  E  K  AAS PQPP 
Sbjct: 427 AAHAGAGAGGPRPVYPCDLCGKSYSAPQSLLRHKAAHAPPAAAA-EAPKDGAASAPQPPP 485

Query: 540 FLLP 543
              P
Sbjct: 486 TFPP 489


>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
           sapiens]
          Length = 1059

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 481 ASDDGSGSGSGDGCLD-DLCSRKVSRKSSSSRTPLTHALPGLSEQEGQKTSAASCPQPPT 539
           A+  G+G+G        DLC +  S   S  R    HA P  +  E  K  AAS PQPP 
Sbjct: 427 AAHAGAGAGGPRPVYPCDLCGKSYSAPQSLLRHKAAHAPPAAAA-EAPKDGAASAPQPPP 485

Query: 540 FLLP 543
              P
Sbjct: 486 TFPP 489


>gi|169162091 PREDICTED: similar to Kinesin-Like Protein family
           member (klp-6) [Homo sapiens]
          Length = 609

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 20/72 (27%), Positives = 34/72 (47%)

Query: 85  LETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRDL 144
           +  ALR+ + +L+A LA           + L  S  T Q    G   ++ TQ A + R+L
Sbjct: 396 INRALREENVLLKASLAKTASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDREL 455

Query: 145 YSELRLYYRGAN 156
              L+++Y+  N
Sbjct: 456 AKALKVFYQSMN 467


>gi|239741525 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 372

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 20/72 (27%), Positives = 34/72 (47%)

Query: 85  LETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRDL 144
           +  ALR+ + +L+A LA           + L  S  T Q    G   ++ TQ A + R+L
Sbjct: 170 INRALREENVLLKASLAKTASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDREL 229

Query: 145 YSELRLYYRGAN 156
              L+++Y+  N
Sbjct: 230 AKALKVFYQSMN 241


>gi|117956391 protease, serine, 33 [Homo sapiens]
          Length = 280

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 43/154 (27%), Positives = 57/154 (37%), Gaps = 19/154 (12%)

Query: 150 LYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYLDCLGKQAEALRPFGEAPREL 209
           + +RGA++     +A  W       F    P+  LP +Y   LG    ALR    +PR L
Sbjct: 54  IQHRGAHVCGGSLIAPQWVLTAAHCF----PRRALPAEYRVRLG----ALRLGSTSPRTL 105

Query: 210 RLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRAVMKLVYCAHCLGVPGARPCP 269
            +   R  +       G      +++    VPL                CL VPGARP P
Sbjct: 106 SVPVRRVLLPPDYSEDGARGDLALLQLRRPVPLSARVQPV---------CLPVPGARPPP 156

Query: 270 DY-CRNVLKGCLANQADLDAEWRNLLDSMVLITD 302
              CR    G L     L  EWR L    V + D
Sbjct: 157 GTPCRVTGWGSLRPGVPL-PEWRPLQGVRVPLLD 189


>gi|239753091 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 383

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 20/72 (27%), Positives = 34/72 (47%)

Query: 85  LETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRDL 144
           +  ALR+ + +L+A LA           + L  S  T Q    G   ++ TQ A + R+L
Sbjct: 170 INRALREENVLLKASLAKIASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDREL 229

Query: 145 YSELRLYYRGAN 156
              L+++Y+  N
Sbjct: 230 AKALKVFYQSMN 241


>gi|4504151 granulin precursor [Homo sapiens]
          Length = 593

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query: 49  VPQAEISGEHLRICPQGYTC 68
           +P+A    +H   CPQGYTC
Sbjct: 391 IPEAVCCSDHQHCCPQGYTC 410


>gi|239757333 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 303

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 479 QDASDDGSGSGSGDGCLDDLCSRKVSRKSSSSRTPLTHALPGLSE----QEGQKTSAAS 533
           +D  D G   G G G + +  +  ++R SS+SR P  +  PGL+      E   +SAAS
Sbjct: 207 EDVHDHGHQLGMGRGAVWNASAPLLNRASSASRWPSEYRKPGLAPGTLGPESTPSSAAS 265


>gi|239751837 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 303

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 479 QDASDDGSGSGSGDGCLDDLCSRKVSRKSSSSRTPLTHALPGLSE----QEGQKTSAAS 533
           +D  D G   G G G + +  +  ++R SS+SR P  +  PGL+      E   +SAAS
Sbjct: 207 EDVHDHGHQLGMGRGAVWNASAPLLNRASSASRWPSEYRKPGLAPGTLGPESTPSSAAS 265


>gi|239746328 PREDICTED: hypothetical protein XP_002343731 [Homo
           sapiens]
          Length = 303

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 479 QDASDDGSGSGSGDGCLDDLCSRKVSRKSSSSRTPLTHALPGLSE----QEGQKTSAAS 533
           +D  D G   G G G + +  +  ++R SS+SR P  +  PGL+      E   +SAAS
Sbjct: 207 EDVHDHGHQLGMGRGAVWNASAPLLNRASSASRWPSEYRKPGLAPGTLGPESTPSSAAS 265


>gi|178557734 microtubule-associated protein tau isoform 6 [Homo
           sapiens]
          Length = 776

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 6/60 (10%)

Query: 482 SDDGSGSGSGDGCLDDLCSRKVSRKSSSSRTPLT--HALPGLSEQEGQKTSAASCPQPPT 539
           S DG+GS           S + S K+  +R  L+  H  PG S+   Q +S A CP+PP+
Sbjct: 382 SKDGTGSDDKKA----KTSTRSSAKTLKNRPCLSPKHPTPGSSDPLIQPSSPAVCPEPPS 437


>gi|82534351 microtubule-associated protein tau isoform 1 [Homo
           sapiens]
          Length = 758

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 6/60 (10%)

Query: 482 SDDGSGSGSGDGCLDDLCSRKVSRKSSSSRTPLT--HALPGLSEQEGQKTSAASCPQPPT 539
           S DG+GS           S + S K+  +R  L+  H  PG S+   Q +S A CP+PP+
Sbjct: 382 SKDGTGSDDKKA----KTSTRSSAKTLKNRPCLSPKHPTPGSSDPLIQPSSPAVCPEPPS 437


>gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
           [Homo sapiens]
          Length = 338

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 8/58 (13%)

Query: 272 CRNVLKGCLANQADLDAEWRNLLDS----MVLITDKFW----GTSGVESVIGSVHTWL 321
           C  VL  CL +Q     +W  LL S    ++++  + W    GT+GV +++G V  +L
Sbjct: 141 CSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGPELWTLQEGTTGVYTILGYVQAFL 198


>gi|34577055 F-box only protein 30 [Homo sapiens]
          Length = 745

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 57  EHLRICPQGYTCCTSEMEENLANRSHAE---LETALRDSSRVLQAMLATQLR 105
           EHL +CP    CCT  ME N    S+A+    E   RD   V Q  +A  L+
Sbjct: 78  EHLEMCPASVVCCT--MEWNRWPVSYADRKSYENLSRDVDEVAQLDMALALQ 127


>gi|55742857 ankyrin repeat domain 6 [Homo sapiens]
          Length = 722

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 3/104 (2%)

Query: 438 NNPEVEVDITKPDMTIR-QQIMQLKIMTNRLRSAYNGNDVDFQDASDDGSGSGSGDGCLD 496
           NNPEV + +TK    +R  +   L+    RL+       V   + +       +GD    
Sbjct: 251 NNPEVALLLTKAPQVLRFSRGRSLRKKRERLKEERRAQSVPRDEVAQSKGSVSAGDTPSS 310

Query: 497 D--LCSRKVSRKSSSSRTPLTHALPGLSEQEGQKTSAASCPQPP 538
           +  +  ++ +R+   S +P   A      +   K SA S P PP
Sbjct: 311 EQAVARKEEAREEFLSASPEPRAKDDRRRKSRPKVSAFSDPTPP 354


>gi|11545875 GDNF family receptor alpha 4 isoform a precursor [Homo
           sapiens]
          Length = 269

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 27/83 (32%), Positives = 33/83 (39%), Gaps = 14/83 (16%)

Query: 487 GSGSGDGCLDDLCSRKVSRKSSSSRTPLTHAL-------PGLSEQEGQKTSAASC----- 534
           G  +  GC    C R + R  +     LTHAL       P  +E+  Q T   SC     
Sbjct: 52  GRAAQGGCPRARCRRALRRFFARGPPALTHALLFCPCAGPACAERRRQ-TFVPSCAFSGP 110

Query: 535 -PQPPTFLLPLLLFLALTVARPR 556
            P PP+ L PL       V RPR
Sbjct: 111 GPAPPSCLEPLNFCERSRVCRPR 133


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,411,760
Number of Sequences: 37866
Number of extensions: 1042686
Number of successful extensions: 3638
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 3598
Number of HSP's gapped (non-prelim): 61
length of query: 558
length of database: 18,247,518
effective HSP length: 107
effective length of query: 451
effective length of database: 14,195,856
effective search space: 6402331056
effective search space used: 6402331056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.