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Search of human proteins with 157502165
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157502165 family with sequence similarity 58 member B [Homo
sapiens]
(252 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157502165 family with sequence similarity 58 member B [Homo s... 512 e-145
gi|196049382 family with sequence similarity 58, member A isofor... 415 e-116
gi|196049384 family with sequence similarity 58, member A isofor... 370 e-103
gi|150417989 cyclin K isoform 1 [Homo sapiens] 92 6e-19
gi|38176158 cyclin K isoform 2 [Homo sapiens] 92 6e-19
gi|88758580 cyclin L2 isoform A [Homo sapiens] 84 2e-16
gi|9945320 cyclin L1 [Homo sapiens] 81 8e-16
gi|17978469 cyclin T2 isoform b [Homo sapiens] 78 8e-15
gi|4502629 cyclin T2 isoform a [Homo sapiens] 78 8e-15
gi|17978466 cyclin T1 [Homo sapiens] 69 5e-12
gi|221554516 cyclin L2 isoform C [Homo sapiens] 64 1e-10
gi|221554518 cyclin L2 isoform D [Homo sapiens] 64 2e-10
gi|88758578 cyclin L2 isoform B [Homo sapiens] 64 2e-10
gi|61676091 cyclin C isoform a [Homo sapiens] 57 2e-08
gi|4502623 cyclin H [Homo sapiens] 45 6e-05
gi|61676093 cyclin C isoform b [Homo sapiens] 38 0.010
gi|38373682 pleckstrin homology domain containing family G membe... 31 0.90
gi|111154084 pleckstrin homology domain containing family G memb... 31 0.90
gi|111154088 pleckstrin homology domain containing family G memb... 31 0.90
gi|111154080 pleckstrin homology domain containing family G memb... 31 0.90
gi|111154078 pleckstrin homology domain containing family G memb... 31 0.90
gi|41352697 centromere protein I [Homo sapiens] 30 2.6
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 28 5.8
gi|94680985 cyclin J-like [Homo sapiens] 28 7.6
>gi|157502165 family with sequence similarity 58 member B [Homo
sapiens]
Length = 252
Score = 512 bits (1319), Expect = e-145
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 1 MEGMEDAGEEAGEDAGEDAREGAAAPAARVHFRVARFIMEAGVKLGMQSIPIATACTIYP 60
MEGMEDAGEEAGEDAGEDAREGAAAPAARVHFRVARFIMEAGVKLGMQSIPIATACTIYP
Sbjct: 1 MEGMEDAGEEAGEDAGEDAREGAAAPAARVHFRVARFIMEAGVKLGMQSIPIATACTIYP 60
Query: 61 KFFCETILDAFDPYLIAMSSIYLAGKVEEQPLWAHDIISVSNRYFNPSSEPLGLDSRLWE 120
KFFCETILDAFDPYLIAMSSIYLAGKVEEQPLWAHDIISVSNRYFNPSSEPLGLDSRLWE
Sbjct: 61 KFFCETILDAFDPYLIAMSSIYLAGKVEEQPLWAHDIISVSNRYFNPSSEPLGLDSRLWE 120
Query: 121 LRDSIVQRELLMLRVLRFQVSFQHPHKYLLYYLVSLKNWLNCHSWQRTPVAVTAWALLRD 180
LRDSIVQRELLMLRVLRFQVSFQHPHKYLLYYLVSLKNWLNCHSWQRTPVAVTAWALLRD
Sbjct: 121 LRDSIVQRELLMLRVLRFQVSFQHPHKYLLYYLVSLKNWLNCHSWQRTPVAVTAWALLRD 180
Query: 181 SYHGGLCLRFQAQHIAVVVLYLALQVYGVEVPAEVEAEKLWWQAFSDDLTKPIIDTIVSD 240
SYHGGLCLRFQAQHIAVVVLYLALQVYGVEVPAEVEAEKLWWQAFSDDLTKPIIDTIVSD
Sbjct: 181 SYHGGLCLRFQAQHIAVVVLYLALQVYGVEVPAEVEAEKLWWQAFSDDLTKPIIDTIVSD 240
Query: 241 LIQIYTIDTEIP 252
LIQIYTIDTEIP
Sbjct: 241 LIQIYTIDTEIP 252
>gi|196049382 family with sequence similarity 58, member A isoform 1
[Homo sapiens]
Length = 248
Score = 415 bits (1067), Expect = e-116
Identities = 209/247 (84%), Positives = 217/247 (87%)
Query: 6 DAGEEAGEDAGEDAREGAAAPAARVHFRVARFIMEAGVKLGMQSIPIATACTIYPKFFCE 65
+A E G EG AP ARVHFRVARFIMEAGVKLGM+SIPIATACTIY KFFCE
Sbjct: 2 EAPEGGGGGPAARGPEGQPAPEARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFCE 61
Query: 66 TILDAFDPYLIAMSSIYLAGKVEEQPLWAHDIISVSNRYFNPSSEPLGLDSRLWELRDSI 125
T LDA+DPYLIAMSSIYLAGKVEEQ L DII+VSNRYFNPS EPL LDSR WELRDSI
Sbjct: 62 TNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDSI 121
Query: 126 VQRELLMLRVLRFQVSFQHPHKYLLYYLVSLKNWLNCHSWQRTPVAVTAWALLRDSYHGG 185
VQ ELLMLRVLRFQVSFQHPHKYLL+YLVSL+NWLN HSWQRTPVAVTAWALLRDSYHG
Sbjct: 122 VQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDSYHGA 181
Query: 186 LCLRFQAQHIAVVVLYLALQVYGVEVPAEVEAEKLWWQAFSDDLTKPIIDTIVSDLIQIY 245
LCLRFQAQHIAV VLYLALQVYGVEVPAEVEAEK WWQ F+DDLTKPIID IVSDLIQIY
Sbjct: 182 LCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQIY 241
Query: 246 TIDTEIP 252
T+DTEIP
Sbjct: 242 TMDTEIP 248
>gi|196049384 family with sequence similarity 58, member A isoform 2
[Homo sapiens]
Length = 228
Score = 370 bits (951), Expect = e-103
Identities = 192/247 (77%), Positives = 199/247 (80%), Gaps = 20/247 (8%)
Query: 6 DAGEEAGEDAGEDAREGAAAPAARVHFRVARFIMEAGVKLGMQSIPIATACTIYPKFFCE 65
+A E G EG AP ARVHFRVARFIMEAGVKLGM+SIPIATACTIY KFFCE
Sbjct: 2 EAPEGGGGGPAARGPEGQPAPEARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFCE 61
Query: 66 TILDAFDPYLIAMSSIYLAGKVEEQPLWAHDIISVSNRYFNPSSEPLGLDSRLWELRDSI 125
T LDA+DPYLIAMSSIYLAGKVEEQ L DII+VSNRYFNPS EPL LDSR WELRDSI
Sbjct: 62 TNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDSI 121
Query: 126 VQRELLMLRVLRFQVSFQHPHKYLLYYLVSLKNWLNCHSWQRTPVAVTAWALLRDSYHGG 185
VQ ELLMLRVLRFQVSFQHPHKYLL+YLVSL+NWLN HSWQRTPVAVTAWALLRDSYHG
Sbjct: 122 VQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDSYHGA 181
Query: 186 LCLRFQAQHIAVVVLYLALQVYGVEVPAEVEAEKLWWQAFSDDLTKPIIDTIVSDLIQIY 245
LCLRFQAQHIAV VLYLALQVYGVEVPAEVEAEK WWQ IY
Sbjct: 182 LCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKPWWQ--------------------IY 221
Query: 246 TIDTEIP 252
T+DTEIP
Sbjct: 222 TMDTEIP 228
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 91.7 bits (226), Expect = 6e-19
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 10/224 (4%)
Query: 25 APAARVHFRVARFIMEAGVKLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLA 84
A AR ARFI + G +LG+ +AT + +F+ F Y+ ++LA
Sbjct: 44 ATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLA 103
Query: 85 GKVEEQPLWAHDIISVSNRYFNPSSEPLGLDSRLWELRDSIVQRELLMLRVLRFQVSFQH 144
GKVEE P DII + N D + ++ ++ E ++L+ ++F + +H
Sbjct: 104 GKVEETPKKCKDIIKTARSLLNDVQFGQFGD----DPKEEVMVLERILLQTIKFDLQVEH 159
Query: 145 PHKYLLYYLVSLKNWLNCHSWQRTPVAVTAWALLRDSYHGGLCLRFQAQHIAVVVLYLAL 204
P+++LL Y LK N + + AW + DS L L+++ + IAV V+YLA
Sbjct: 160 PYQFLLKYAKQLKGDKN----KIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAG 215
Query: 205 QVYGVEVP--AEVEAEKLWWQAFSDDLTKPIIDTIVSDLIQIYT 246
++ E+ + WW+ F D+ +++ I ++ +Y+
Sbjct: 216 RLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYS 259
>gi|38176158 cyclin K isoform 2 [Homo sapiens]
Length = 354
Score = 91.7 bits (226), Expect = 6e-19
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 10/224 (4%)
Query: 25 APAARVHFRVARFIMEAGVKLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLA 84
A AR ARFI + G +LG+ +AT + +F+ F Y+ ++LA
Sbjct: 44 ATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLA 103
Query: 85 GKVEEQPLWAHDIISVSNRYFNPSSEPLGLDSRLWELRDSIVQRELLMLRVLRFQVSFQH 144
GKVEE P DII + N D + ++ ++ E ++L+ ++F + +H
Sbjct: 104 GKVEETPKKCKDIIKTARSLLNDVQFGQFGD----DPKEEVMVLERILLQTIKFDLQVEH 159
Query: 145 PHKYLLYYLVSLKNWLNCHSWQRTPVAVTAWALLRDSYHGGLCLRFQAQHIAVVVLYLAL 204
P+++LL Y LK N + + AW + DS L L+++ + IAV V+YLA
Sbjct: 160 PYQFLLKYAKQLKGDKN----KIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAG 215
Query: 205 QVYGVEVP--AEVEAEKLWWQAFSDDLTKPIIDTIVSDLIQIYT 246
++ E+ + WW+ F D+ +++ I ++ +Y+
Sbjct: 216 RLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYS 259
>gi|88758580 cyclin L2 isoform A [Homo sapiens]
Length = 520
Score = 83.6 bits (205), Expect = 2e-16
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 38 IMEAGVKLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQPLWAHDI 97
I AG+ L + + +AT ++ +FF ++M+ ++LA K+EE P D+
Sbjct: 85 IQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDV 144
Query: 98 ISVSNRYFNPSSE----PLGLDSRLWELRDSIVQRELLMLRVLRFQVSFQHPHKYLLYYL 153
I+V +R + PL LD L++ I++ E +L+ L F V +HPHK ++ YL
Sbjct: 145 INVFHRLRQLRDKKKPVPLLLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYL 204
Query: 154 VSLKNWLNCHSWQRTPVAVTAWALLRDSYHGGLCLRFQAQHIAVVVLYLALQVYGVEVPA 213
L+ N H Q T+W + DS + +RFQ + IA +YLA + + +P
Sbjct: 205 QVLECERNQHLVQ------TSWNYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPN 258
Query: 214 EVEAEKLWWQAFSDDLTKPIIDTIVSDLIQIY 245
W+ F T+ I I ++Q+Y
Sbjct: 259 RPH----WFLLFG--ATEEEIQEICLKILQLY 284
>gi|9945320 cyclin L1 [Homo sapiens]
Length = 526
Score = 81.3 bits (199), Expect = 8e-16
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 38 IMEAGVKLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQPLWAHDI 97
I AG+ L + + +AT ++ +FF ++AM+ I LA K+EE P D+
Sbjct: 90 IQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDV 149
Query: 98 ISVSNRYFN----PSSEPLGLDSRLWELRDSIVQRELLMLRVLRFQVSFQHPHKYLLYYL 153
I+V + + PL LD ++ +++ E +L+ L F V +HPHK ++ YL
Sbjct: 150 INVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYL 209
Query: 154 VSLKNWLNCHSWQRTPVAVTAWALLRDSYHGGLCLRFQAQHIAVVVLYLALQVYGVEVPA 213
L C + + TAW + DS + +RFQ + IA +YLA + + +P
Sbjct: 210 ----QVLECE--RNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPT 263
Query: 214 EVEAEKLWWQAFSDDLTKPIIDTIVSDLIQIYT 246
W+ F T+ I I + +++YT
Sbjct: 264 RPH----WFLLFG--TTEEEIQEICIETLRLYT 290
>gi|17978469 cyclin T2 isoform b [Homo sapiens]
Length = 730
Score = 77.8 bits (190), Expect = 8e-15
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 33 RVARFIMEAGVKLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQPL 92
+ A I E G +L + + I TA +F+ F+ +I+ ++++LA KVEEQ
Sbjct: 39 QAANLIQEMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKVEEQAR 98
Query: 93 WAHDIISVSNRYFNPSSEPLGLDSR---LWELRDSIVQRELLMLRVLRFQVSFQHPHKYL 149
+I V++ +P EPL LD++ + +V E +ML+ L F+++ +HPH
Sbjct: 99 KLEHVIKVAHACLHP-LEPL-LDTKCDAYLQQTQELVILETIMLQTLGFEITIEHPH--- 153
Query: 150 LYYLVSLKNWLNCHSWQRT--PVAVTAWALLRDSYH-GGLCLRFQAQHIAVVVLYLALQV 206
+ + C R +A T++ + +S H CL+++ IA V ++LA +
Sbjct: 154 -------TDVVKCTQLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKW 206
Query: 207 YGVEVPAEVEAEKLWWQAFSDDLTKPIIDTIVSDLIQI 244
E+P + K WW+ +T ++D + + +QI
Sbjct: 207 SNWEIPVSTDG-KHWWEYVDPTVTLELLDELTHEFLQI 243
>gi|4502629 cyclin T2 isoform a [Homo sapiens]
Length = 663
Score = 77.8 bits (190), Expect = 8e-15
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 33 RVARFIMEAGVKLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQPL 92
+ A I E G +L + + I TA +F+ F+ +I+ ++++LA KVEEQ
Sbjct: 39 QAANLIQEMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKVEEQAR 98
Query: 93 WAHDIISVSNRYFNPSSEPLGLDSR---LWELRDSIVQRELLMLRVLRFQVSFQHPHKYL 149
+I V++ +P EPL LD++ + +V E +ML+ L F+++ +HPH
Sbjct: 99 KLEHVIKVAHACLHP-LEPL-LDTKCDAYLQQTQELVILETIMLQTLGFEITIEHPH--- 153
Query: 150 LYYLVSLKNWLNCHSWQRT--PVAVTAWALLRDSYH-GGLCLRFQAQHIAVVVLYLALQV 206
+ + C R +A T++ + +S H CL+++ IA V ++LA +
Sbjct: 154 -------TDVVKCTQLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKW 206
Query: 207 YGVEVPAEVEAEKLWWQAFSDDLTKPIIDTIVSDLIQI 244
E+P + K WW+ +T ++D + + +QI
Sbjct: 207 SNWEIPVSTDG-KHWWEYVDPTVTLELLDELTHEFLQI 243
>gi|17978466 cyclin T1 [Homo sapiens]
Length = 726
Score = 68.6 bits (166), Expect = 5e-12
Identities = 50/217 (23%), Positives = 103/217 (47%), Gaps = 17/217 (7%)
Query: 33 RVARFIMEAGVKLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQPL 92
+ A + + G +L + + I TA +F+ F +A ++++LA KVEEQP
Sbjct: 40 QAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPK 99
Query: 93 WAHDIISVSNRYFNP--SSEPLGLDSRLWELRDSIVQRELLMLRVLRFQVSFQHPHKYLL 150
+I V++ +P S ++ L +++D ++ E ++L+ L F+++ HPH ++
Sbjct: 100 KLEHVIKVAHTCLHPQESLPDTRSEAYLQQVQDLVI-LESIILQTLGFELTIDHPHTHV- 157
Query: 151 YYLVSLKNWLNCHSWQRT--PVAVTAWALLRDSYH-GGLCLRFQAQHIAVVVLYLALQVY 207
+ C R +A T++ + +S H L++ +A V ++LA +
Sbjct: 158 ---------VKCTQLVRASKDLAQTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACKWS 208
Query: 208 GVEVPAEVEAEKLWWQAFSDDLTKPIIDTIVSDLIQI 244
E+P + K WW+ +T ++D + + +QI
Sbjct: 209 NWEIPVSTDG-KHWWEYVDATVTLELLDELTHEFLQI 244
>gi|221554516 cyclin L2 isoform C [Homo sapiens]
Length = 236
Score = 63.9 bits (154), Expect = 1e-10
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 38 IMEAGVKLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQPLWAHDI 97
I AG+ L + + +AT ++ +FF ++M+ ++LA K+EE P D+
Sbjct: 85 IQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDV 144
Query: 98 ISVSNRYFNPSSE----PLGLDSRLWELRDSIVQRELLMLRVLRFQVSFQHPHKYLLYYL 153
I+V +R + PL LD L++ I++ E +L+ L F V +HPHK ++ YL
Sbjct: 145 INVFHRLRQLRDKKKPVPLLLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYL 204
Query: 154 VSLKNWLNCHSWQRTPVAVTAWALLRDSY 182
L+ N H Q + VA L DS+
Sbjct: 205 QVLECERNQHLVQTSWVASEDPLLKWDSW 233
>gi|221554518 cyclin L2 isoform D [Homo sapiens]
Length = 227
Score = 63.5 bits (153), Expect = 2e-10
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 38 IMEAGVKLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQPLWAHDI 97
I AG+ L + + +AT ++ +FF ++M+ ++LA K+EE P D+
Sbjct: 85 IQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDV 144
Query: 98 ISVSNRYFNPSSE----PLGLDSRLWELRDSIVQRELLMLRVLRFQVSFQHPHKYLLYYL 153
I+V +R + PL LD L++ I++ E +L+ L F V +HPHK ++ YL
Sbjct: 145 INVFHRLRQLRDKKKPVPLLLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYL 204
Query: 154 VSLKNWLNCHSWQRTPVA 171
L+ N H Q + VA
Sbjct: 205 QVLECERNQHLVQTSWVA 222
>gi|88758578 cyclin L2 isoform B [Homo sapiens]
Length = 226
Score = 63.5 bits (153), Expect = 2e-10
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 38 IMEAGVKLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQPLWAHDI 97
I AG+ L + + +AT ++ +FF ++M+ ++LA K+EE P D+
Sbjct: 85 IQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDV 144
Query: 98 ISVSNRYFNPSSE----PLGLDSRLWELRDSIVQRELLMLRVLRFQVSFQHPHKYLLYYL 153
I+V +R + PL LD L++ I++ E +L+ L F V +HPHK ++ YL
Sbjct: 145 INVFHRLRQLRDKKKPVPLLLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYL 204
Query: 154 VSLKNWLNCHSWQRTPVA 171
L+ N H Q + VA
Sbjct: 205 QVLECERNQHLVQTSWVA 222
>gi|61676091 cyclin C isoform a [Homo sapiens]
Length = 283
Score = 56.6 bits (135), Expect = 2e-08
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 33/216 (15%)
Query: 38 IMEAGVKLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQPL----- 92
I G L ++ IATA + +F+ L + DP L+A + ++LA KVEE +
Sbjct: 48 IQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTR 107
Query: 93 ---WAHDIISVSNRYFNPSSEPLGLDSRLWELRDSIVQRELLMLRVLRFQVSFQHPHKYL 149
A ++ Y P P + + I++ E +L ++ + HP++ L
Sbjct: 108 LIAAATSVLKTRFSYAFPKEFPYRM--------NHILECEFYLLELMDCCLIVYHPYRPL 159
Query: 150 LYYLVSLKNWLNCHSWQRTPVAVTAWALLRDSYHGGLCLRFQAQHIAVVVLYLALQVYGV 209
L Y+ + Q + AW ++ D+Y LCL + IA+ L++A V
Sbjct: 160 LQYVQDM--------GQEDMLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVV--- 208
Query: 210 EVPAEVEAEKLWWQAFSDDLTKPIIDTIVSDLIQIY 245
+ + + W+ S D+ K I I+ ++++Y
Sbjct: 209 ----QQKDARQWFAELSVDMEK--ILEIIRVILKLY 238
>gi|4502623 cyclin H [Homo sapiens]
Length = 323
Score = 45.1 bits (105), Expect = 6e-05
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 44 KLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQPLWAHDIISVSNR 103
K M + TAC + +F+ + + P +I ++ +LA KV+E +VS+
Sbjct: 72 KPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDE--------FNVSSP 123
Query: 104 YF--NPSSEPLGLDSRLWELRDSIVQRELLMLRVLRFQVSFQHPHKYLLYYLVSLK 157
F N PLG + L + I++ ELL+++ L F + +P++ +L+ LK
Sbjct: 124 QFVGNLRESPLGQEKAL----EQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLK 175
>gi|61676093 cyclin C isoform b [Homo sapiens]
Length = 198
Score = 37.7 bits (86), Expect = 0.010
Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 33/178 (18%)
Query: 76 IAMSSIYLAGKVEEQPLWAH--------DIISVSNRYFNPSSEPLGLDSRLWELRDSIVQ 127
+A + ++LA KVEE + ++ ++ Y P P ++ I++
Sbjct: 1 MAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFPKEFPYRMNH--------ILE 52
Query: 128 RELLMLRVLRFQVSFQHPHKYLLYYLVSLKNWLNCHSWQRTPVAVTAWALLRDSYHGGLC 187
E +L ++ + HP++ LL Y+ + Q + AW ++ D+Y LC
Sbjct: 53 CEFYLLELMDCCLIVYHPYRPLLQYVQDMG--------QEDMLLPLAWRIVNDTYRTDLC 104
Query: 188 LRFQAQHIAVVVLYLALQVYGVEVPAEVEAEKLWWQAFSDDLTKPIIDTIVSDLIQIY 245
L + IA+ L++A V + + + W+ S D+ K I I+ ++++Y
Sbjct: 105 LLYPPFMIALACLHVACVV-------QQKDARQWFAELSVDMEK--ILEIIRVILKLY 153
>gi|38373682 pleckstrin homology domain containing family G member 5
isoform a [Homo sapiens]
Length = 1006
Score = 31.2 bits (69), Expect = 0.90
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 145 PHKYLLYYLVSLKNWLNCHSWQRTPVAVTAW--ALLRDSYHGGLCLRFQAQHIAVVVLYL 202
PH+ L Y + LK+ L R AV A ++ R +H C+R + + + +
Sbjct: 484 PHQRLTKYPLLLKSVLRKTEEPRAKEAVVAMIGSVERFIHHVNACMRQRQERQRLAAVVS 543
Query: 203 ALQVYGVEVPAEVEAEKLWWQAFSDDLTKPI 233
+ Y V + E +KL + DLT PI
Sbjct: 544 RIDAYEVVESSSDEVDKLLKEFLHLDLTAPI 574
>gi|111154084 pleckstrin homology domain containing family G member
5 isoform b [Homo sapiens]
Length = 1083
Score = 31.2 bits (69), Expect = 0.90
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 145 PHKYLLYYLVSLKNWLNCHSWQRTPVAVTAW--ALLRDSYHGGLCLRFQAQHIAVVVLYL 202
PH+ L Y + LK+ L R AV A ++ R +H C+R + + + +
Sbjct: 561 PHQRLTKYPLLLKSVLRKTEEPRAKEAVVAMIGSVERFIHHVNACMRQRQERQRLAAVVS 620
Query: 203 ALQVYGVEVPAEVEAEKLWWQAFSDDLTKPI 233
+ Y V + E +KL + DLT PI
Sbjct: 621 RIDAYEVVESSSDEVDKLLKEFLHLDLTAPI 651
>gi|111154088 pleckstrin homology domain containing family G member
5 isoform a [Homo sapiens]
Length = 1006
Score = 31.2 bits (69), Expect = 0.90
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 145 PHKYLLYYLVSLKNWLNCHSWQRTPVAVTAW--ALLRDSYHGGLCLRFQAQHIAVVVLYL 202
PH+ L Y + LK+ L R AV A ++ R +H C+R + + + +
Sbjct: 484 PHQRLTKYPLLLKSVLRKTEEPRAKEAVVAMIGSVERFIHHVNACMRQRQERQRLAAVVS 543
Query: 203 ALQVYGVEVPAEVEAEKLWWQAFSDDLTKPI 233
+ Y V + E +KL + DLT PI
Sbjct: 544 RIDAYEVVESSSDEVDKLLKEFLHLDLTAPI 574
>gi|111154080 pleckstrin homology domain containing family G member
5 isoform a [Homo sapiens]
Length = 1006
Score = 31.2 bits (69), Expect = 0.90
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 145 PHKYLLYYLVSLKNWLNCHSWQRTPVAVTAW--ALLRDSYHGGLCLRFQAQHIAVVVLYL 202
PH+ L Y + LK+ L R AV A ++ R +H C+R + + + +
Sbjct: 484 PHQRLTKYPLLLKSVLRKTEEPRAKEAVVAMIGSVERFIHHVNACMRQRQERQRLAAVVS 543
Query: 203 ALQVYGVEVPAEVEAEKLWWQAFSDDLTKPI 233
+ Y V + E +KL + DLT PI
Sbjct: 544 RIDAYEVVESSSDEVDKLLKEFLHLDLTAPI 574
>gi|111154078 pleckstrin homology domain containing family G member
5 isoform c [Homo sapiens]
Length = 1062
Score = 31.2 bits (69), Expect = 0.90
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 145 PHKYLLYYLVSLKNWLNCHSWQRTPVAVTAW--ALLRDSYHGGLCLRFQAQHIAVVVLYL 202
PH+ L Y + LK+ L R AV A ++ R +H C+R + + + +
Sbjct: 540 PHQRLTKYPLLLKSVLRKTEEPRAKEAVVAMIGSVERFIHHVNACMRQRQERQRLAAVVS 599
Query: 203 ALQVYGVEVPAEVEAEKLWWQAFSDDLTKPI 233
+ Y V + E +KL + DLT PI
Sbjct: 600 RIDAYEVVESSSDEVDKLLKEFLHLDLTAPI 630
>gi|41352697 centromere protein I [Homo sapiens]
Length = 756
Score = 29.6 bits (65), Expect = 2.6
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 32 FRVARFIMEAGVKLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQP 91
FRV R +++ K+GMQ P A KFF ++ P IY +
Sbjct: 217 FRV-RKLLDLQAKMGMQ--PHLQALLSLYKFFAPALISVSLP---VRKKIYFKNS---EN 267
Query: 92 LWAHDIISVSNRYFNPSSEPLGL 114
LW +++V R PS EPL L
Sbjct: 268 LWKTALLAVKQRNRGPSPEPLKL 290
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 28.5 bits (62), Expect = 5.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 2 EGMEDAGEEAGEDAGEDAREG 22
EG E+ GEE GE+ GE EG
Sbjct: 989 EGEEEEGEEEGEEEGEGEEEG 1009
>gi|94680985 cyclin J-like [Homo sapiens]
Length = 435
Score = 28.1 bits (61), Expect = 7.6
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 122 RDSIVQRELLMLRVLRFQVSFQHPHKYLLYYL---VSLKNWLNCHSWQRT 168
+ ++ ELL+L + + P +L YYL VS K+ +CH+W T
Sbjct: 172 KKELLSTELLLLEAFSWNLCLPTPAHFLDYYLLASVSQKDH-HCHTWPTT 220
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,194,109
Number of Sequences: 37866
Number of extensions: 368510
Number of successful extensions: 1022
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 962
Number of HSP's gapped (non-prelim): 33
length of query: 252
length of database: 18,247,518
effective HSP length: 100
effective length of query: 152
effective length of database: 14,460,918
effective search space: 2198059536
effective search space used: 2198059536
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.